BLASTX nr result
ID: Ophiopogon27_contig00032586
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00032586
(439 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116... 96 4e-28
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 100 7e-27
emb|CDP17738.1| unnamed protein product [Coffea canephora] 96 6e-26
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 99 1e-25
emb|CDP17739.1| unnamed protein product [Coffea canephora] 94 2e-24
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 89 1e-23
ref|XP_017178258.1| PREDICTED: uncharacterized mitochondrial pro... 77 2e-23
gb|PNX57796.1| putative retrotransposon Ty1-copia subclass prote... 77 3e-23
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 83 3e-23
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 83 3e-23
emb|CAJ86151.1| H0413E07.4 [Oryza sativa] 83 3e-23
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 83 3e-23
emb|CAJ86192.1| H0306F03.15 [Oryza sativa] 83 3e-23
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 83 3e-23
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa] 83 3e-23
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] 83 3e-23
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 81 7e-23
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 81 7e-23
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 82 7e-23
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 83 7e-23
>ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116374, partial [Tarenaya
hassleriana]
Length = 209
Score = 95.9 bits (237), Expect(3) = 4e-28
Identities = 39/48 (81%), Positives = 46/48 (95%)
Frame = -2
Query: 219 CKLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGG 76
CKLEFCEHCVLGK++KVKFGTAIH TEG+LDY+H+DVWGP++ TSLGG
Sbjct: 161 CKLEFCEHCVLGKQSKVKFGTAIHNTEGILDYIHSDVWGPTRETSLGG 208
Score = 52.4 bits (124), Expect(3) = 4e-28
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGALAASVDTDEDT 309
G+LKV G+LVV+KG+R NLY+ +GSTV G +A + D+D+
Sbjct: 86 GILKVVSGALVVLKGVRKNNLYYFKGSTVIGTVAVTAGEDKDS 128
Score = 24.6 bits (52), Expect(3) = 4e-28
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1
Query: 301 LWHMRLGHRRE 269
LWHMRLGH E
Sbjct: 133 LWHMRLGHPGE 143
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 100 bits (248), Expect(2) = 7e-27
Identities = 41/55 (74%), Positives = 50/55 (90%)
Frame = -2
Query: 219 CKLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVSF 55
CKLEFCEHCVLGK+ +VKFGTAIH T+G+LDYVH+DVWGP+K S+GG +YFV+F
Sbjct: 387 CKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRHYFVTF 441
Score = 48.1 bits (113), Expect(2) = 7e-27
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGALAASVDT---DEDTSRVMAYEIG-TQER 270
G+LK T G+LV++KG+ NLY+ QGSTV G +AA+ + D + +++ +G E+
Sbjct: 311 GILKATLGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEK 370
Query: 269 SL 264
SL
Sbjct: 371 SL 372
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 96.3 bits (238), Expect(2) = 6e-26
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = -2
Query: 219 CKLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVSF 55
CKLEFCEHCVL K+ KVKFGT IH T+G+LDYVH+DVWGP+K SLGG YFV+F
Sbjct: 473 CKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGRYYFVTF 527
Score = 48.9 bits (115), Expect(2) = 6e-26
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKGIRDRNLYFLQGSTVTG----ALAASVDTDEDTSRVMAYEIG-TQE 273
G+LKVT G+L+++KG+R NLY+ QGSTV G A ++S D + +++ +G E
Sbjct: 396 GILKVTSGALLMLKGVRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGDAGE 455
Query: 272 RSL 264
+SL
Sbjct: 456 KSL 458
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 99.0 bits (245), Expect(2) = 1e-25
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = -2
Query: 219 CKLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVSF 55
CKL+FCEHCV GKKT+VKFGTAIH T+G+LDYVH+DVWGPSK SL G +Y+V+F
Sbjct: 236 CKLDFCEHCVKGKKTRVKFGTAIHDTKGILDYVHSDVWGPSKTASLAGNHYYVTF 290
Score = 45.4 bits (106), Expect(2) = 1e-25
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKGIRDRN-LYFLQGSTV--TGALAASVDTDEDTSRVMAYEIG-TQER 270
GV+K+ G+LVVMKG+R N LY+ QG+T+ T A+A+S + + +++++ +G ER
Sbjct: 160 GVMKIISGALVVMKGVRKNNRLYYYQGTTIIGTAAVASSDEKELESAKLWHMRLGHAGER 219
Query: 269 SL 264
SL
Sbjct: 220 SL 221
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 94.4 bits (233), Expect(2) = 2e-24
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = -2
Query: 219 CKLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVSF 55
CKLEFCEHCVL K+ KVKFGT IH T+G+LDYVH++VWGP+K SLGG YFV+F
Sbjct: 81 CKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSNVWGPAKTPSLGGRYYFVTF 135
Score = 45.8 bits (107), Expect(2) = 2e-24
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGALAASVDT----DEDTSRVMAYEIG-TQE 273
G+LKVT G+LV++KG+R LY+ QGS V G AA+ + D + +++ +G E
Sbjct: 4 GILKVTSGALVMLKGVRKNILYYYQGSIVVGTAAATTSSSSKKDAEATKLWHMRLGHAGE 63
Query: 272 RSL 264
+SL
Sbjct: 64 KSL 66
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 88.6 bits (218), Expect(2) = 1e-23
Identities = 36/47 (76%), Positives = 43/47 (91%)
Frame = -2
Query: 219 CKLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLG 79
CKLEFCEHCVLGK+ +VKFGTAIH T+G+LDYVH+DVWGP+K S+G
Sbjct: 388 CKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIG 434
Score = 48.9 bits (115), Expect(2) = 1e-23
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGALAASVDT---DEDTSRVMAYEIG-TQER 270
G+LK T G+LV++KG+ NLY+ QGSTV G +AA+ + D + +++ +G E+
Sbjct: 312 GILKATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHAGEK 371
Query: 269 SL 264
SL
Sbjct: 372 SL 373
>ref|XP_017178258.1| PREDICTED: uncharacterized mitochondrial protein AtMg00300-like
[Malus domestica]
Length = 135
Score = 76.6 bits (187), Expect(3) = 2e-23
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -2
Query: 219 CKLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDV 109
CKLEFCEHCVLGK+T+VKFGTAIH T+G+LDYVHTDV
Sbjct: 99 CKLEFCEHCVLGKQTRVKFGTAIHHTKGILDYVHTDV 135
Score = 55.1 bits (131), Expect(3) = 2e-23
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKGIRDRNLYFLQGSTVTG--ALAASVDTDE-DTSRVMAYEIG 282
GVLK G+LVVMKGIR NLYFLQGSTV G A+ + D D DT+R+ +G
Sbjct: 23 GVLKAVYGALVVMKGIRQNNLYFLQGSTVIGGAAVTEAADADSTDTTRLWHMRLG 77
Score = 25.0 bits (53), Expect(3) = 2e-23
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1
Query: 301 LWHMRLGHRRE 269
LWHMRLGH E
Sbjct: 71 LWHMRLGHAGE 81
>gb|PNX57796.1| putative retrotransposon Ty1-copia subclass protein, partial
[Trifolium pratense]
Length = 285
Score = 77.4 bits (189), Expect(3) = 3e-23
Identities = 30/53 (56%), Positives = 43/53 (81%)
Frame = -2
Query: 213 LEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVSF 55
+EFCEHCV GK +++F ++ H++ G+LDYVHTDVWGP+ TS GG+ YFV++
Sbjct: 90 MEFCEHCVYGKAHRLRFSSSKHKSRGILDYVHTDVWGPAPVTSKGGSRYFVTY 142
Score = 54.3 bits (129), Expect(3) = 3e-23
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKGIRDRNLYFLQGSTVTGALAASVDTDED 312
G LKV +GSLVVMKG+R RNLY L G TVTG LA ++ +D
Sbjct: 12 GGLKVVRGSLVVMKGVRHRNLYTLMGETVTGDLAVGINRSKD 53
Score = 24.6 bits (52), Expect(3) = 3e-23
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 301 LWHMRLGHRRE 269
+WHMRLGH E
Sbjct: 60 MWHMRLGHMSE 70
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 83.2 bits (204), Expect(3) = 3e-23
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP++ TS GGA Y ++
Sbjct: 479 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMT 531
Score = 46.2 bits (108), Expect(3) = 3e-23
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY L+G+T+ G +AA D+
Sbjct: 402 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDS 441
Score = 26.6 bits (57), Expect(3) = 3e-23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 301 LWHMRLGHRREV 266
LWHMRLGH E+
Sbjct: 450 LWHMRLGHMSEI 461
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 83.2 bits (204), Expect(3) = 3e-23
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP++ TS GGA Y ++
Sbjct: 425 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMT 477
Score = 46.2 bits (108), Expect(3) = 3e-23
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY L+G+T+ G +AA D+
Sbjct: 348 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDS 387
Score = 26.6 bits (57), Expect(3) = 3e-23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 301 LWHMRLGHRREV 266
LWHMRLGH E+
Sbjct: 396 LWHMRLGHMSEI 407
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
Length = 1205
Score = 83.2 bits (204), Expect(3) = 3e-23
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP++ TS GGA Y ++
Sbjct: 449 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMT 501
Score = 46.2 bits (108), Expect(3) = 3e-23
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY LQG+T+ G +A D+
Sbjct: 372 GILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDS 411
Score = 26.6 bits (57), Expect(3) = 3e-23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 301 LWHMRLGHRREV 266
LWHMRLGH E+
Sbjct: 420 LWHMRLGHMSEI 431
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 83.2 bits (204), Expect(3) = 3e-23
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP++ TS GGA Y ++
Sbjct: 464 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMT 516
Score = 46.2 bits (108), Expect(3) = 3e-23
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMK-GIRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY LQG+T+ G +A D+
Sbjct: 387 GILKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVSDS 426
Score = 26.6 bits (57), Expect(3) = 3e-23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 301 LWHMRLGHRREV 266
LWHMRLGH E+
Sbjct: 435 LWHMRLGHMSEI 446
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
Length = 1037
Score = 83.2 bits (204), Expect(3) = 3e-23
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP++ TS GGA Y ++
Sbjct: 281 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMT 333
Score = 46.2 bits (108), Expect(3) = 3e-23
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY LQG+T+ G +A D+
Sbjct: 204 GILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVSDS 243
Score = 26.6 bits (57), Expect(3) = 3e-23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 301 LWHMRLGHRREV 266
LWHMRLGH E+
Sbjct: 252 LWHMRLGHMSEI 263
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 83.2 bits (204), Expect(3) = 3e-23
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP++ TS GGA Y ++
Sbjct: 296 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMT 348
Score = 46.2 bits (108), Expect(3) = 3e-23
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY L+G+T+ G +AA D+
Sbjct: 219 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDS 258
Score = 26.6 bits (57), Expect(3) = 3e-23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 301 LWHMRLGHRREV 266
LWHMRLGH E+
Sbjct: 267 LWHMRLGHMSEI 278
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
Length = 944
Score = 83.2 bits (204), Expect(3) = 3e-23
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP++ TS GGA Y ++
Sbjct: 296 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMT 348
Score = 46.2 bits (108), Expect(3) = 3e-23
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY L+G+T+ G +AA D+
Sbjct: 219 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDS 258
Score = 26.6 bits (57), Expect(3) = 3e-23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 301 LWHMRLGHRREV 266
LWHMRLGH E+
Sbjct: 267 LWHMRLGHMSEI 278
>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 83.2 bits (204), Expect(3) = 3e-23
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP++ TS GGA Y ++
Sbjct: 430 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMT 482
Score = 46.2 bits (108), Expect(3) = 3e-23
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY L+G+T+ G +AA D+
Sbjct: 353 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDS 392
Score = 26.6 bits (57), Expect(3) = 3e-23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 301 LWHMRLGHRREV 266
LWHMRLGH E+
Sbjct: 401 LWHMRLGHMSEI 412
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 81.3 bits (199), Expect(3) = 7e-23
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP+ TS GGA Y ++
Sbjct: 499 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMT 551
Score = 46.2 bits (108), Expect(3) = 7e-23
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY L+G+T+ G +AA D+
Sbjct: 422 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDS 461
Score = 27.3 bits (59), Expect(3) = 7e-23
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 301 LWHMRLGHRREVFAKLVEVRTFERCEDLQVGVL 203
LWHMRLGH E+ L E+ E + +G L
Sbjct: 470 LWHMRLGHMSEI--GLAELSKRELLDGQSIGKL 500
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 81.3 bits (199), Expect(3) = 7e-23
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP+ TS GGA Y ++
Sbjct: 499 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMT 551
Score = 46.2 bits (108), Expect(3) = 7e-23
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY L+G+T+ G +AA D+
Sbjct: 422 GILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDS 461
Score = 27.3 bits (59), Expect(3) = 7e-23
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 301 LWHMRLGHRREVFAKLVEVRTFERCEDLQVGVL 203
LWHMRLGH E+ L E+ E + +G L
Sbjct: 470 LWHMRLGHMSEI--GLAELSKRELLDGQSIGKL 500
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 82.0 bits (201), Expect(3) = 7e-23
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP+ TS GGA Y ++
Sbjct: 436 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPAHKTSFGGARYMMT 488
Score = 46.2 bits (108), Expect(3) = 7e-23
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMK-GIRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY L+G+T+ G +AA D+
Sbjct: 359 GILKVTKGSLVVMKVDIKSANLYHLRGTTILGNVAAVFDS 398
Score = 26.6 bits (57), Expect(3) = 7e-23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 301 LWHMRLGHRREV 266
LWHMRLGH E+
Sbjct: 407 LWHMRLGHMSEI 418
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 83.2 bits (204), Expect(3) = 7e-23
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = -2
Query: 216 KLEFCEHCVLGKKTKVKFGTAIHQTEGLLDYVHTDVWGPSKNTSLGGANYFVS 58
KL+FCEHC+ GK +VKF T+ H TEG+LDYVH+D+WGP++ TS GGA Y ++
Sbjct: 373 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMT 425
Score = 45.1 bits (105), Expect(3) = 7e-23
Identities = 24/40 (60%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -3
Query: 437 GVLKVTKGSLVVMKG-IRDRNLYFLQGSTVTGALAASVDT 321
G+LKVTKGSLVVMK I+ NLY L+G+T+ G +AA D+
Sbjct: 296 GILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDS 335
Score = 26.6 bits (57), Expect(3) = 7e-23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 301 LWHMRLGHRREV 266
LWHMRLGH E+
Sbjct: 344 LWHMRLGHMSEI 355