BLASTX nr result

ID: Ophiopogon27_contig00032548 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00032548
         (383 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA64763.1| ribosomal RNA methyltransferase Nop2 [Apostasia s...    56   1e-06
ref|XP_020262026.1| tubulin-folding cofactor B [Asparagus offici...    52   7e-06
ref|XP_010276589.1| PREDICTED: tubulin-folding cofactor B [Nelum...    52   7e-06
ref|XP_012836903.1| PREDICTED: tubulin-folding cofactor B [Eryth...    52   9e-06

>gb|PKA64763.1| ribosomal RNA methyltransferase Nop2 [Apostasia shenzhenica]
          Length = 242

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = -2

Query: 100 GEEAVVKLVGKAETVRPGYWVGI*LDEPLGKHD 2
           G+  VVK VGKAE V PG+W+G+ LDEPLGKHD
Sbjct: 170 GKRGVVKFVGKAEAVAPGFWIGVQLDEPLGKHD 202


>ref|XP_020262026.1| tubulin-folding cofactor B [Asparagus officinalis]
 gb|ONK73236.1| uncharacterized protein A4U43_C04F28760 [Asparagus officinalis]
          Length = 242

 Score = 52.0 bits (123), Expect(2) = 7e-06
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -2

Query: 97  EEAVVKLVGKAETVRPGYWVGI*LDEPLGKHD 2
           +  VVK VG+AET+ PG WVGI LDEPLGKHD
Sbjct: 171 KRGVVKFVGRAETLAPGCWVGIQLDEPLGKHD 202



 Score = 25.4 bits (54), Expect(2) = 7e-06
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 138 RLQFDHRCKVEPGEKR 91
           +++   RC+VEPGEKR
Sbjct: 157 KIKVGDRCEVEPGEKR 172


>ref|XP_010276589.1| PREDICTED: tubulin-folding cofactor B [Nelumbo nucifera]
          Length = 242

 Score = 52.0 bits (123), Expect(2) = 7e-06
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = -2

Query: 97  EEAVVKLVGKAETVRPGYWVGI*LDEPLGKHD 2
           +  VVK VGKAE + PG+WVGI  DEPLGKHD
Sbjct: 171 KRGVVKFVGKAENIAPGFWVGIQYDEPLGKHD 202



 Score = 25.4 bits (54), Expect(2) = 7e-06
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 138 RLQFDHRCKVEPGEKR 91
           +++   RC+VEPGEKR
Sbjct: 157 KIKVGDRCEVEPGEKR 172


>ref|XP_012836903.1| PREDICTED: tubulin-folding cofactor B [Erythranthe guttata]
 gb|EYU37628.1| hypothetical protein MIMGU_mgv1a012750mg [Erythranthe guttata]
          Length = 241

 Score = 52.0 bits (123), Expect(2) = 9e-06
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = -2

Query: 97  EEAVVKLVGKAETVRPGYWVGI*LDEPLGKHD 2
           +  VVK VG+AET+ PG+WVGI  DEPLGKHD
Sbjct: 170 KRGVVKFVGRAETLAPGFWVGIQYDEPLGKHD 201



 Score = 25.0 bits (53), Expect(2) = 9e-06
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 135 LQFDHRCKVEPGEKR 91
           ++   RC+VEPGEKR
Sbjct: 157 IRVGERCQVEPGEKR 171


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