BLASTX nr result
ID: Ophiopogon27_contig00032500
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00032500
(486 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 117 3e-27
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 115 7e-27
emb|CDP17738.1| unnamed protein product [Coffea canephora] 112 1e-25
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 110 5e-25
emb|CDP17739.1| unnamed protein product [Coffea canephora] 107 2e-24
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 104 5e-23
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo... 103 1e-22
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo... 103 1e-22
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 103 1e-22
gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna ... 102 2e-22
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo... 102 4e-22
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo... 102 4e-22
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo... 102 4e-22
ref|XP_008374274.1| PREDICTED: alpha-mannosidase-like [Malus dom... 102 5e-22
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 101 9e-22
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 100 1e-21
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 100 2e-21
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 100 2e-21
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 99 8e-21
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 99 8e-21
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 117 bits (292), Expect = 3e-27
Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 11/172 (6%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F+KWK VE QTGR+I+ L +GG +P ++C GI R ++ + K+ Q +GV+E
Sbjct: 518 FLKWKDEVENQTGRKIKVLRTDNGGEYKSDPFLKVCQDCGIIRHFTIR--KTPQQNGVSE 575
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M IL+ KVR M+S++ + W E +TYA +++NRLPS+AI+GK P E+WSGK A+DY
Sbjct: 576 RMNKILVEKVRCMLSNAELGRKFWAEAVTYAQHLVNRLPSSAIDGKTPLEVWSGKPATDY 635
Query: 354 GSLRVFGCPTHEKT-------GSKEFMFVGIK-GVLDYKF*DPKSRNITLSR 485
SL VFG + +K+ +F+G GV Y+ +++ +SR
Sbjct: 636 DSLHVFGSIAYYHVIESKLDPRAKKALFMGFSPGVKGYRLWCLEAKKTIISR 687
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 115 bits (289), Expect = 7e-27
Identities = 69/172 (40%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F+KWKK +E QTGR+I+ +GG + +P ++ C + GI R ++ + Q +GV E
Sbjct: 313 FLKWKKRMETQTGRKIKHFRTDNGGEYTSDPFKKACEESGIVRHFTVKHTP--QQNGVAE 370
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ KVR M+S++ K W E + YA ++INRLPS+AI GK P E W GK A+DY
Sbjct: 371 RMNRTLLEKVRCMLSNAGLGKQFWAEAVVYASHLINRLPSSAIGGKTPLEKWFGKPATDY 430
Query: 354 GSLRVFGCPT--HEKTG-----SKEFMFVGI-KGVLDYKF*DPKSRNITLSR 485
SL VFGC H K +K+ +F+GI GV Y+ +++ +SR
Sbjct: 431 DSLHVFGCTAYYHVKESKLDPRAKKAIFMGIASGVKGYRLWCLETKKTIISR 482
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 112 bits (280), Expect = 1e-25
Identities = 66/172 (38%), Positives = 102/172 (59%), Gaps = 11/172 (6%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F+KWK VE QTGR+I+ L +GG +P +++C + GI R + + K Q +GV+E
Sbjct: 550 FLKWKARVENQTGRKIKILRTDNGGEYKSDPFQKICQECGIVRHFIVR--KIPQQNGVSE 607
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ KVR M+S++ + W E +TYA +++NRLPS+AI GK P E+WSGK A+DY
Sbjct: 608 HMNKTLVEKVRCMLSNAGLGRKFWAEAVTYAQHLVNRLPSSAIGGKTPLEVWSGKLATDY 667
Query: 354 GSLRVFGCPTHEKTG-------SKEFMFVGIK-GVLDYKF*DPKSRNITLSR 485
SLR+F + +K+ +F+G GV Y+ +++ +SR
Sbjct: 668 DSLRIFDSTAYYHVNESKLDPRAKKALFMGFSAGVKGYRLWYLEAKKTIISR 719
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 110 bits (275), Expect = 5e-25
Identities = 65/172 (37%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F+KWK VE TGR+I+ L +GG +P +C GI R ++ + K+ Q +GV+E
Sbjct: 464 FLKWKAEVENHTGRKIKVLQTDNGGEYKSDPFLNVCQDCGIVRHFTVR--KTPQQNGVSE 521
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ KV M+S++ ++ W E +TYA +++NRLPS+AI+GK P E+WSGK A+DY
Sbjct: 522 RMNKTLVEKVCCMLSNAELGREFWAEAVTYAQHLVNRLPSSAIDGKTPLEVWSGKPATDY 581
Query: 354 GSLRVFGCPTHEKT-------GSKEFMFVGIK-GVLDYKF*DPKSRNITLSR 485
SL VFG + +K+ +F+G GV Y+ + + +SR
Sbjct: 582 DSLHVFGSIAYYHVIESKLDPRAKKALFMGFSPGVKGYRLWCLEKKKTIISR 633
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 107 bits (267), Expect = 2e-24
Identities = 63/172 (36%), Positives = 103/172 (59%), Gaps = 11/172 (6%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F+KWK VE QTGR+I+ L +GG +P +++ + GI + ++ + K+ Q +GV+E
Sbjct: 158 FLKWKARVENQTGRKIKILRTDNGGEYKSDPFQKIGQECGIVQHFTVR--KTPQQNGVSE 215
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ KV M+S++R + W E +TYA +++NRLPS+AI GK P E+WSGK +DY
Sbjct: 216 RMNKTLVEKVHCMLSNARLGRKFWAETVTYAQHLVNRLPSSAIGGKTPLEVWSGKPTTDY 275
Query: 354 GSLRVFGCPTHEKTG-------SKEFMFVGIK-GVLDYKF*DPKSRNITLSR 485
SLR+F + +K+ +F+G+ GV Y+ +++ +SR
Sbjct: 276 DSLRIFYSTAYYHVNESKLDPRAKKAIFMGLNAGVKGYRLWCLEAKKTIISR 327
>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
Length = 876
Score = 104 bits (260), Expect = 5e-23
Identities = 65/175 (37%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKLHGGMPSE---NPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F WK VE QTGR+I+ L +E + + C + GI+R +S + K+ Q +GV E
Sbjct: 448 FKLWKAEVENQTGRKIKYLRSDNGTEYTNSQFEKFCEQHGIQRHFSVR--KTPQQNGVAE 505
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L + R + + K W E + ACY+INR P ++EGK+ E+W+GK D
Sbjct: 506 RMNMSLTERARCLQLKAGLSKGFWAETINMACYLINRSPRASLEGKVAEEVWTGKPI-DL 564
Query: 354 GSLRVFGCPTHEKTG----------SKEFMFVGI-KGVLDYKF*DPKSRNITLSR 485
+LR+FGCPT SK+ +FVG KGV +K DP S+ + LSR
Sbjct: 565 DNLRIFGCPTFVHISSEDRSKLDPKSKKCIFVGYSKGVKGFKLWDPVSKKMVLSR 619
>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 103 bits (257), Expect = 1e-22
Identities = 67/175 (38%), Positives = 99/175 (56%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F ++K VEL TG+RI+ L +GG + C ++GI+R ++ A + Q +GV E
Sbjct: 479 FKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTV--AHTPQQNGVAE 536
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ + R M+ ++ K W E + ACY+INR PSTAI K P E+WSGK S+Y
Sbjct: 537 RMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWSGK-PSNY 595
Query: 354 GSLRVFGCPTH------EKT----GSKEFMFVG-IKGVLDYKF*DPKSRNITLSR 485
SL VFGCP + E+T S++ +F+G V Y+ DP +R + +SR
Sbjct: 596 SSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSR 650
>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 103 bits (257), Expect = 1e-22
Identities = 67/175 (38%), Positives = 99/175 (56%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F ++K VEL TG+RI+ L +GG + C ++GI+R ++ A + Q +GV E
Sbjct: 528 FKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTV--AHTPQQNGVAE 585
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ + R M+ ++ K W E + ACY+INR PSTAI K P E+WSGK S+Y
Sbjct: 586 RMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWSGK-PSNY 644
Query: 354 GSLRVFGCPTH------EKT----GSKEFMFVG-IKGVLDYKF*DPKSRNITLSR 485
SL VFGCP + E+T S++ +F+G V Y+ DP +R + +SR
Sbjct: 645 SSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSR 699
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 103 bits (257), Expect = 1e-22
Identities = 68/175 (38%), Positives = 96/175 (54%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F ++K VEL+TG+RI+ L +GG ++ C ++GI R ++ A + Q +GV E
Sbjct: 529 FKEFKAQVELETGKRIKCLRTDNGGEYTDGDFLAFCKQEGITRQFTV--AHTPQQNGVAE 586
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ + R M+ ++ K W E ACY+INR PSTAI K P E+W GK DY
Sbjct: 587 RMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGK-PGDY 645
Query: 354 GSLRVFGCPTH------EKT----GSKEFMFVG-IKGVLDYKF*DPKSRNITLSR 485
SLRVFGCP + E+T S+ F+G V Y+ DP +R I +SR
Sbjct: 646 SSLRVFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSR 700
>gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna angularis]
Length = 473
Score = 102 bits (254), Expect = 2e-22
Identities = 66/175 (37%), Positives = 98/175 (56%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F ++K VEL+TG+ I+ L +GG ++ C ++GI+R ++ A + Q +GV E
Sbjct: 141 FKEFKAQVELETGKMIKCLRTDNGGEYTDGDFLAFCKQEGIKRQFTV--AHTPQQNGVAE 198
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ + R M+ ++ K W E + ACY+INR PSTAI K P E+W GK A DY
Sbjct: 199 RMNRTLLERTRAMLKTTGLAKSFWAEAVKTACYLINRSPSTAIGVKTPMEMWKGKPA-DY 257
Query: 354 GSLRVFGCPTH------EKT----GSKEFMFVG-IKGVLDYKF*DPKSRNITLSR 485
SL VFGCP + E+T S++ +F+G V Y+ DP + I +SR
Sbjct: 258 SSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTAHKIIVSR 312
>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 102 bits (254), Expect = 4e-22
Identities = 66/175 (37%), Positives = 99/175 (56%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F ++K VEL TG+RI+ L +GG + C ++GI+R ++ A + Q +GV E
Sbjct: 479 FKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTV--AHTPQQNGVAE 536
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ + R M+ ++ K W E + ACY+INR PSTAI K P E+W+GK S+Y
Sbjct: 537 RMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGK-PSNY 595
Query: 354 GSLRVFGCPTH------EKT----GSKEFMFVG-IKGVLDYKF*DPKSRNITLSR 485
SL VFGCP + E+T S++ +F+G V Y+ DP +R + +SR
Sbjct: 596 SSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSR 650
>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 102 bits (254), Expect = 4e-22
Identities = 66/175 (37%), Positives = 99/175 (56%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F ++K VEL TG+RI+ L +GG + C ++GI+R ++ A + Q +GV E
Sbjct: 479 FKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTV--AHTPQQNGVAE 536
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ + R M+ ++ K W E + ACY+INR PSTAI K P E+W+GK S+Y
Sbjct: 537 RMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGK-PSNY 595
Query: 354 GSLRVFGCPTH------EKT----GSKEFMFVG-IKGVLDYKF*DPKSRNITLSR 485
SL VFGCP + E+T S++ +F+G V Y+ DP +R + +SR
Sbjct: 596 SSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSR 650
>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 102 bits (254), Expect = 4e-22
Identities = 66/175 (37%), Positives = 99/175 (56%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F ++K VEL TG+RI+ L +GG + C ++GI+R ++ A + Q +GV E
Sbjct: 528 FKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTV--AHTPQQNGVAE 585
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ + R M+ ++ K W E + ACY+INR PSTAI K P E+W+GK S+Y
Sbjct: 586 RMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGK-PSNY 644
Query: 354 GSLRVFGCPTH------EKT----GSKEFMFVG-IKGVLDYKF*DPKSRNITLSR 485
SL VFGCP + E+T S++ +F+G V Y+ DP +R + +SR
Sbjct: 645 SSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSR 699
>ref|XP_008374274.1| PREDICTED: alpha-mannosidase-like [Malus domestica]
Length = 863
Score = 102 bits (253), Expect = 5e-22
Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Frame = +3
Query: 21 VVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTESMECIL 191
+VE QTGR+I+ L +GG + + ++ +GI R +S + Q +GV + + L
Sbjct: 1 MVENQTGRKIKILRXDNGGEYTXDXFFKVXXXEGIVRHFSVRGTP--QQNGVAZRLNXTL 58
Query: 192 IRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDYGSLRVF 371
+ KVR M+S S K W E + YAC+IINRLPS A +GK P E+W GK +SDY + +F
Sbjct: 59 LEKVRCMLSQSXLSKSFWXEAVNYACHIINRLPSAAXQGKTPMEVWXGKPSSDYDYIXIF 118
Query: 372 GCPTHEKTGS-------KEFMFVGI-KGVLDYKF*DPKSRNITLSR 485
G P + K+ +F+G GV Y+ P+ + + +SR
Sbjct: 119 GSPAYFHVTENXLDPRXKKAIFLGFSSGVKGYRLWCPEMKKLVISR 164
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 101 bits (251), Expect = 9e-22
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F +K +EL+TG++I+ L +GG + C ++GI R ++ A + Q +GV E
Sbjct: 529 FKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTV--AHTPQQNGVAE 586
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ + R M+ ++ K W E + ACY+INR PSTAI+ K P E+W GK DY
Sbjct: 587 RMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPV-DY 645
Query: 354 GSLRVFGCPTH------EKT----GSKEFMFVG-IKGVLDYKF*DPKSRNITLSR 485
SL VFGCP + E+T S++ +F+G V Y+ DP +R + +SR
Sbjct: 646 SSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSR 700
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 100 bits (250), Expect = 1e-21
Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 11/172 (6%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKLH--GGMPSENPV-RELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F +WK +VE QT R+++ L GM + + + C +GI R Y+ Q +GV E
Sbjct: 449 FKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTP--QQNGVAE 506
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M +I K R M+S++ K W E ++ ACY+INR PS AI+ K P E+WSG A +Y
Sbjct: 507 RMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPA-NY 565
Query: 354 GSLRVFGCP--THEKTGSKE-----FMFVG-IKGVLDYKF*DPKSRNITLSR 485
LRVFGC H G E +F+G + GV YK P+++ + +SR
Sbjct: 566 SDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVISR 617
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 100 bits (249), Expect = 2e-21
Identities = 63/175 (36%), Positives = 96/175 (54%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F +K +EL+TG++I+ L +GG + C ++GI R ++ A + Q +GV E
Sbjct: 529 FKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTV--AHTPQQNGVAE 586
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ + R M+ ++ K W E + ACY+INR PST I+ K P E+W GK DY
Sbjct: 587 RMNRTLLERTRAMLKTAEMAKSFWAEAVKTACYVINRSPSTTIDLKTPMEMWKGKPV-DY 645
Query: 354 GSLRVFGCPTH------EKT----GSKEFMFVG-IKGVLDYKF*DPKSRNITLSR 485
SL VFGCP + E+T S++ +F+G V Y+ DP +R + +SR
Sbjct: 646 SSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSR 700
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 100 bits (248), Expect = 2e-21
Identities = 69/175 (39%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F +WK V QTGR+I+ L +GG + +LC +GI R ++ + KS Q +GV E
Sbjct: 501 FKEWKAEVGNQTGRKIKCLRSDNGGEYRDKKFLQLCKDEGITRHFTVK--KSPQQNGVAE 558
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ K R M + ++ W E +ACY+INR PS AI K E+WSGK DY
Sbjct: 559 RMNRTLMEKERSMRFHAGLPEEFWAEAANHACYLINRSPSRAINFKCAEEVWSGKPV-DY 617
Query: 354 GSLRVFGC------PTHEKT----GSKEFMFVGI-KGVLDYKF*DPKSRNITLSR 485
+LRVFGC P E+T S E +F+G KGV YK D + +SR
Sbjct: 618 SNLRVFGCSAYAHIPKDERTKLEPKSLECLFIGFEKGVKGYKLWDIVNEKKVISR 672
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 98.6 bits (244), Expect = 8e-21
Identities = 63/172 (36%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKLH---GGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F +WK ++E QT + ++ L GG + + C K+GI R ++ Q +GV E
Sbjct: 473 FKEWKVMIERQTEKEVKVLRTDSGGEFCSDAFDDYCRKEGIVRHHTIPYTP--QQNGVAE 530
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M +I R M+S++R +K W E+ ACY+INR PS + K P E+WSG A DY
Sbjct: 531 RMNRTIISNTRCMLSNARMNKRFWAEVANTACYLINRSPSIPLNKKTPIEVWSGMPA-DY 589
Query: 354 GSLRVFGCP--THEKTGSKE-----FMFVGI-KGVLDYKF*DPKSRNITLSR 485
LRVFGC H G E +F+G GV YK +PK+ +SR
Sbjct: 590 SQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLWNPKTNKTFMSR 641
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 98.6 bits (244), Expect = 8e-21
Identities = 64/175 (36%), Positives = 95/175 (54%), Gaps = 14/175 (8%)
Frame = +3
Query: 3 FIKWKKVVELQTGRRIRKL---HGGMPSENPVRELCLKQGIRRCYSSQRAKSMQLDGVTE 173
F +K +EL+T ++I+ L +GG + C ++GI R ++ A + Q +GV E
Sbjct: 529 FKAFKAQIELETEKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTV--AHTPQQNGVAE 586
Query: 174 SMECILIRKVRYMMSSSRADKDLWTEILTYACYIINRLPSTAIEGKIPFEIWSGKTASDY 353
M L+ + R M+ ++ K W E ACY+INR PSTAI+ K P E+W GK DY
Sbjct: 587 RMNRTLLERTRAMLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPV-DY 645
Query: 354 GSLRVFGCPTH------EKT----GSKEFMFVG-IKGVLDYKF*DPKSRNITLSR 485
SL VFGCP + EKT S++ +F+G V Y+ DP +R + +SR
Sbjct: 646 SSLHVFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSR 700