BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00032427
         (484 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK68535.1| uncharacterized protein A4U43_C05F12950 [Asparagu...   120   5e-30
gb|ASR75372.1| retrotransposon protein [Oryza nivara]                 122   3e-29
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   121   7e-29
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   121   9e-29
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa...   119   6e-28
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   118   1e-27
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     115   7e-27
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   115   9e-27
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   115   1e-26
emb|CAJ86192.1| H0306F03.15 [Oryza sativa]                            114   2e-26
emb|CAJ86151.1| H0413E07.4 [Oryza sativa]                             114   2e-26
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     114   3e-26
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]        113   4e-26
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo...   112   6e-26
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   112   8e-26
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   112   1e-25
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...   112   1e-25
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic...   111   2e-25
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   111   3e-25
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   111   3e-25

>gb|ONK68535.1| uncharacterized protein A4U43_C05F12950 [Asparagus officinalis]
          Length = 299

 Score =  120 bits (300), Expect = 5e-30
 Identities = 83/174 (47%), Positives = 100/174 (57%), Gaps = 15/174 (8%)
 Frame = +1

Query: 1   AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWY 147
           A F+LEL QL+VK   LHG   E I      GF+V+ KE          +GLK S R+WY
Sbjct: 64  AHFNLELEQLDVKTAFLHGELDEQIFMHQPEGFIVEGKEDHVCRLKKSLYGLKQSPRQWY 123

Query: 148 KRFDTFMVDHMVIRGLCMTIVCIK----GSLVMALMCFTLVCK*HVDCSEKHVNIKVLKS 315
            RFDTFM +H   R    + V  K    G  V  L+    +     D SE    I  LKS
Sbjct: 124 LRFDTFMFEHGYSRNKYDSCVYHKKLNDGFFVYLLLYVDDMLIAAKDMSE----INELKS 179

Query: 316 QLSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPV 477
           QL  EFEMK LGA KKILGMEI ++R+   LFLSQ++Y+ KVLE FGMLD+KPV
Sbjct: 180 QLKHEFEMKNLGATKKILGMEIHRNRREGSLFLSQEKYIKKVLERFGMLDAKPV 233


>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
          Length = 1170

 Score =  122 bits (307), Expect = 3e-29
 Identities = 81/178 (45%), Positives = 101/178 (56%), Gaps = 18/178 (10%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWY 147
            A  DLEL QL+VK   LHG   E I      GF+V  KE          +GLK S R+WY
Sbjct: 828  AMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWY 887

Query: 148  KRFDTFMVDHMVIRG---LCMTIVCIKGSLVMALMCFTLVCK*HVD----CSEKHVNIKV 306
            KRFD+FM+ H   R     C+ I  + GS +  L+        +VD     ++    I  
Sbjct: 888  KRFDSFMLSHGFKRSEFDSCVYIKFVNGSPIYLLL--------YVDDMLIAAKSKEQITT 939

Query: 307  LKSQLSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            LK QLS EF+MK LGA KKILGMEI++DR +  LFLSQQ Y+ KVL+ F M D+KPVS
Sbjct: 940  LKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVS 997


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score =  121 bits (304), Expect = 7e-29
 Identities = 78/174 (44%), Positives = 100/174 (57%), Gaps = 14/174 (8%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWY 147
            A  DLEL QL+VK   LHG   E I      GF+V  KE          +GLK S R+WY
Sbjct: 908  AMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWY 967

Query: 148  KRFDTFMVDHMVIRG---LCMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQ 318
            KRFD+FM+ H   R     C+ I  + GS +  L+    +    +  ++    I  LK Q
Sbjct: 968  KRFDSFMLSHGFKRSEFDSCVYIKFVNGSPIYLLLYVDDI----LIAAKSKEQITTLKKQ 1023

Query: 319  LSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            LS EF+MK LGA KKILGMEI++D+ +  LFLSQQ Y+ KVL+ F M D+KPVS
Sbjct: 1024 LSSEFDMKDLGAAKKILGMEITRDKNSGLLFLSQQSYIKKVLQCFNMHDAKPVS 1077


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
            Group]
 gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1322

 Score =  121 bits (303), Expect = 9e-29
 Identities = 80/175 (45%), Positives = 100/175 (57%), Gaps = 18/175 (10%)
 Frame = +1

Query: 10   DLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWYKRF 156
            DLEL QL+VK   LHG   E I      GF+V  KE          +GLK S R+WYKRF
Sbjct: 911  DLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRF 970

Query: 157  DTFMVDHMVIRG---LCMTIVCIKGSLVMALMCFTLVCK*HVD----CSEKHVNIKVLKS 315
            D+FM+ H   R     C+ I  + GS +  L+        +VD     ++    I  LK 
Sbjct: 971  DSFMLSHGFKRSEFDSCVYIKFVNGSPIYLLL--------YVDDMLIAAKSKEQITTLKK 1022

Query: 316  QLSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            QLS EF+MK LGA KKILGMEI++DR +  LFLSQQ Y+ KVL+ F M D+KPVS
Sbjct: 1023 QLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVS 1077


>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
 gb|AAL75759.1| Putative pol polyprotein [Oryza sativa Japonica Group]
 gb|AAP51772.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1005

 Score =  119 bits (297), Expect = 6e-28
 Identities = 77/175 (44%), Positives = 98/175 (56%), Gaps = 14/175 (8%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWY 147
            A  DLEL QL+VK   LHG   E I      GF+V  KE         ++GLK S R+WY
Sbjct: 592  AMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEGYVCKLKRSFYGLKQSPRQWY 651

Query: 148  KRFDTFMVDHMVIRG---LCMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQ 318
            KRFD FM+ H   R     C+ I  + GS +  L    ++       ++    I  LK Q
Sbjct: 652  KRFDLFMLSHGFKRSEFDSCVYIKFVNGSPIYLLYVDDMLI-----AAKSKEQITTLKKQ 706

Query: 319  LSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVSV 483
            LS EF+MK LGA KKILGMEI++DR +  LFLSQQ Y+  VL+ F M D+K VS+
Sbjct: 707  LSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKNVLQRFNMHDAKLVSI 761


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAT44170.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1175

 Score =  118 bits (295), Expect = 1e-27
 Identities = 79/171 (46%), Positives = 95/171 (55%), Gaps = 11/171 (6%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWY 147
            A  DLEL QL+VK   LHG   E I      GF+V  KE          +GLK S R+WY
Sbjct: 761  AMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWY 820

Query: 148  KRFDTFMVDHMVIRGLCMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQLSG 327
            KRFD+FM+ H   R    + V IK   V  +     V    +    K   I  LK QLS 
Sbjct: 821  KRFDSFMLSHGFKRSEFDSCVYIKFVNVSPIYLLLYVDDMLIAAKSKE-QITTLKKQLSS 879

Query: 328  EFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            EF+MK L A KKILGMEI++DR +  LFLSQQ Y+ KVL+ F M D+KPVS
Sbjct: 880  EFDMKDLDAAKKILGMEITRDRNSGWLFLSQQSYIKKVLQRFNMHDTKPVS 930


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  115 bits (289), Expect = 7e-27
 Identities = 77/174 (44%), Positives = 101/174 (58%), Gaps = 14/174 (8%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWY 147
            A  D EL Q+NVK   LHG   E I      GFVV  KE          +GLK S R+WY
Sbjct: 890  AMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWY 949

Query: 148  KRFDTFMVDH---MVIRGLCMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQ 318
            KRFD+FM+     +     C+ +  + GS++  L+    +     D SE    I+ LK+Q
Sbjct: 950  KRFDSFMLSQKFRISNYDSCVYLKVVDGSVIYLLLYVDDMLIAAKDKSE----IEKLKAQ 1005

Query: 319  LSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            LS EFEMK LGA KKILGMEI+++R + +L+LSQ+ Y+ KVL  F M D+KPVS
Sbjct: 1006 LSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVS 1059


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  115 bits (288), Expect = 9e-27
 Identities = 77/174 (44%), Positives = 100/174 (57%), Gaps = 14/174 (8%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWY 147
            A  D EL Q++VK   LHG   E I      GFVV  KE          +GLK S R+WY
Sbjct: 660  AMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWY 719

Query: 148  KRFDTFMVDHMVIRGL---CMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQ 318
            KRFD+FM+     R     C+ +  + GS +  L+    +     D SE    I+ LK+Q
Sbjct: 720  KRFDSFMLSQKFRRSNYDNCVYLKVVDGSAIYLLLYVDDMLIAAKDKSE----IEKLKAQ 775

Query: 319  LSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            LS EFEMK LGA KKILGMEI+++R + +L+LSQ+ Y+ KVL  F M D+KPVS
Sbjct: 776  LSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVS 829


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  115 bits (287), Expect = 1e-26
 Identities = 77/174 (44%), Positives = 99/174 (56%), Gaps = 14/174 (8%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWY 147
            A  D EL Q++VK   LHG   E I     +GFVV  KE          +GLK S R+WY
Sbjct: 1125 AMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWY 1184

Query: 148  KRFDTFMVDHMVIRG---LCMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQ 318
            KRFD+FM+     R     C+ +  + GS +  L+    +     D SE    I  LK+Q
Sbjct: 1185 KRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLIAAKDKSE----IAKLKAQ 1240

Query: 319  LSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            LS EFEMK LGA KKILGMEI++ R + +L+LSQ+ Y+ KVL  F M D+KPVS
Sbjct: 1241 LSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVS 1294


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
          Length = 1037

 Score =  114 bits (285), Expect = 2e-26
 Identities = 76/175 (43%), Positives = 99/175 (56%), Gaps = 14/175 (8%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWY 147
            A  D EL Q++VK   LHG   E I      GFVV  KE          +GLK S R+WY
Sbjct: 676  AMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWY 735

Query: 148  KRFDTFMVDHMVIRG---LCMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQ 318
            KRFD+FM+     R     C+ +  + GS +  L+    +     D SE    I  LK+Q
Sbjct: 736  KRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLIAAKDKSE----IAKLKAQ 791

Query: 319  LSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVSV 483
            LS EFEMK LGA KKILGMEI+++R + +L+LSQ+ Y+ KVL  F M D+KP+ V
Sbjct: 792  LSSEFEMKDLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRFNMHDAKPIYV 846


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
          Length = 1205

 Score =  114 bits (285), Expect = 2e-26
 Identities = 76/175 (43%), Positives = 99/175 (56%), Gaps = 14/175 (8%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWY 147
            A  D EL Q++VK   LHG   E I      GFVV  KE          +GLK S R+WY
Sbjct: 844  AMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWY 903

Query: 148  KRFDTFMVDHMVIRG---LCMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQ 318
            KRFD+FM+     R     C+ +  + GS +  L+    +     D SE    I  LK+Q
Sbjct: 904  KRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLIAAKDKSE----IAKLKAQ 959

Query: 319  LSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVSV 483
            LS EFEMK LGA KKILGMEI+++R + +L+LSQ+ Y+ KVL  F M D+KP+ V
Sbjct: 960  LSSEFEMKDLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRFNMHDAKPIYV 1014


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  114 bits (284), Expect = 3e-26
 Identities = 76/171 (44%), Positives = 98/171 (57%), Gaps = 14/171 (8%)
 Frame = +1

Query: 10   DLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWYKRF 156
            D EL Q++VK   LHG   E I      GFVV  KE          +GLK S R+WYKRF
Sbjct: 800  DYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVYRLKKSLYGLKQSPRQWYKRF 859

Query: 157  DTFMVDHMVIRG---LCMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQLSG 327
            D+FM      R     C+ +  + GS +  L+    +     D SE    I+ LK+QLS 
Sbjct: 860  DSFMFSQKFRRSNYDSCVYLKVVDGSSIYLLLYVDDMLIAAKDKSE----IEKLKAQLSS 915

Query: 328  EFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            EFEMK LGA KKILGMEI+++R + +L+LSQ+ Y+ KVL  F M D+KPVS
Sbjct: 916  EFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVS 966


>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
          Length = 576

 Score =  113 bits (282), Expect = 4e-26
 Identities = 77/175 (44%), Positives = 97/175 (55%), Gaps = 18/175 (10%)
 Frame = +1

Query: 10  DLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWYKRF 156
           DLEL QL+VK   LHG   + I      GF+V  KE          +GLK S R+WYKRF
Sbjct: 244 DLELKQLDVKTTFLHGELEDEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRF 303

Query: 157 DTFMVDHMVIRG---LCMTIVCIKGSLVMALMCFTLVCK*HVD----CSEKHVNIKVLKS 315
           D+FM+ H         C+ I  + GS +  L+        +VD     ++    I  LK 
Sbjct: 304 DSFMLSHGFKWSEFDSCVYIKFVNGSPIYLLL--------YVDDMLIAAKSKEQITTLKK 355

Query: 316 QLSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
           QLS EF+MK LGA KKILGMEI++D     LFLSQQ Y+ KVLE F M D+KP+S
Sbjct: 356 QLSSEFDMKDLGAAKKILGMEITRDINFGLLFLSQQSYIKKVLEHFNMHDAKPIS 410


>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 503

 Score =  112 bits (280), Expect = 6e-26
 Identities = 73/171 (42%), Positives = 95/171 (55%), Gaps = 11/171 (6%)
 Frame = +1

Query: 1   AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKEY---------FGLK*SHRRWY 147
           A FDLEL QL+VK   LHG   E I      GFVV  KE+         +GLK + R+WY
Sbjct: 84  ALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSLYGLKQAPRQWY 143

Query: 148 KRFDTFMVDHMVIRGLCMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQLSG 327
           K+FD+FM+     R      +  +       +   L     +  S     I  LK+QL+ 
Sbjct: 144 KKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQLNN 203

Query: 328 EFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
           EFEMK LGA KKILGMEI +DRQ  +LFLSQQ+Y+ ++L+ F M + KPVS
Sbjct: 204 EFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVS 254


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
            baccatum]
          Length = 1526

 Score =  112 bits (281), Expect = 8e-26
 Identities = 78/179 (43%), Positives = 100/179 (55%), Gaps = 19/179 (10%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*E--HISSTRGFVVDDKE---------YFGLK*SHRRWY 147
            A +DLEL QL+VK   LHG   E  +I    GFVV  KE          +GLK S R+WY
Sbjct: 573  ALYDLELEQLDVKTAFLHGNLEEEIYIQQPEGFVVPGKENHVCRLKKSLYGLKQSPRQWY 632

Query: 148  KRFDTFMVDHMVIRGLCMTIVCIK----GSLVMALMCFTLVCK*HVD----CSEKHVNIK 303
            KRFD+FM  H   R      V  +    GSLV  L+        +VD     +     + 
Sbjct: 633  KRFDSFMTGHGYSRSSYDNCVYFQKLSDGSLVYLLL--------YVDDMLIAARDKTLVD 684

Query: 304  VLKSQLSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
             LK QL+ EF+MK LG  KKILGMEI++DRQ  +LFLSQ++Y+ K+L+ FGM D K V+
Sbjct: 685  KLKVQLNSEFDMKDLGPAKKILGMEINRDRQAGKLFLSQKKYVMKMLDRFGMRDCKAVN 743


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  112 bits (280), Expect = 1e-25
 Identities = 73/171 (42%), Positives = 95/171 (55%), Gaps = 11/171 (6%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKEY---------FGLK*SHRRWY 147
            A FDLEL QL+VK   LHG   E I      GFVV  KE+         +GLK + R+WY
Sbjct: 613  ALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSLYGLKQAPRQWY 672

Query: 148  KRFDTFMVDHMVIRGLCMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQLSG 327
            K+FD+FM+     R      +  +       +   L     +  S     I  LK+QL+ 
Sbjct: 673  KKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQLNN 732

Query: 328  EFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            EFEMK LGA KKILGMEI +DRQ  +LFLSQQ+Y+ ++L+ F M + KPVS
Sbjct: 733  EFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNMNNCKPVS 783


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
            Group]
 gb|AAN04164.1| Putative retrotransposon protein [Oryza sativa Japonica Group]
 gb|AAP53029.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 1229

 Score =  112 bits (280), Expect = 1e-25
 Identities = 78/178 (43%), Positives = 99/178 (55%), Gaps = 18/178 (10%)
 Frame = +1

Query: 1    AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKE---------YFGLK*SHRRWY 147
            A  DLEL QL+VK   LHG   E I      GF+V  KE          +GLK S R+WY
Sbjct: 854  AMHDLELEQLDVKTIFLHGELEEEIYMDQPEGFIVPGKEDDVCKLKRSLYGLKQSPRQWY 913

Query: 148  KRFDTFMVDHMVIRG---LCMTIVCIKGSLVMALMCFTLVCK*HVD----CSEKHVNIKV 306
            KRFD+FM+ H   R     C+ I  + GS +  L+        +VD     ++    I  
Sbjct: 914  KRFDSFMLSHGFKRSEFDSCVYIKFVNGSHIYLLL--------YVDDMLIAAKSKEQITT 965

Query: 307  LKSQLSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            LK QLS EF+MK L A KKILGMEI++D  +  LFLSQQ Y+ KVL+ F + D+KPVS
Sbjct: 966  LKKQLSSEFDMKDLVASKKILGMEITRDINSGLLFLSQQSYIKKVLQRFNIHDAKPVS 1023


>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
          Length = 624

 Score =  111 bits (278), Expect = 2e-25
 Identities = 71/171 (41%), Positives = 96/171 (56%), Gaps = 11/171 (6%)
 Frame = +1

Query: 1   AWFDLELGQLNVKMGCLHGRF*EHI--SSTRGFVVDDKEY---------FGLK*SHRRWY 147
           A FDLEL QL+VK   LHG   E I    + GF+   KE+         +GLK + R+WY
Sbjct: 267 ALFDLELEQLDVKTAFLHGELEEEIYMEQSDGFIAPGKEHLVCRLKKSLYGLKQAPRQWY 326

Query: 148 KRFDTFMVDHMVIRGLCMTIVCIKGSLVMALMCFTLVCK*HVDCSEKHVNIKVLKSQLSG 327
           KRF +FM+     +      +  +     + +   L     +  S     IK LK++LS 
Sbjct: 327 KRFHSFMIGQNYCKSQYDDCIYFQNFQNGSFIYLLLYVDDMLIASRDKSLIKKLKTELSN 386

Query: 328 EFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
           EF+MK LGA KKILGMEI +DRQ  +LFLSQQ+Y+ +VL+ F M + KPVS
Sbjct: 387 EFDMKELGAAKKILGMEIRRDRQAGKLFLSQQKYIKRVLDRFNMNNCKPVS 437


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  111 bits (277), Expect = 3e-25
 Identities = 78/178 (43%), Positives = 99/178 (55%), Gaps = 21/178 (11%)
 Frame = +1

Query: 10   DLELGQLNVKMGCLHGRF*E--HISSTRGFVVDDKE---------YFGLK*SHRRWYKRF 156
            DLEL QL+VK   LHG   E  ++    GF V  KE          +GLK S R+WYKRF
Sbjct: 1427 DLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRF 1486

Query: 157  DTFMVDHMVIRGLCMTIVCI------KGSLVMALMCFTLVCK*HVD----CSEKHVNIKV 306
            D+FM+ H   R  C    C+       GS +  L+        +VD     S+    I  
Sbjct: 1487 DSFMIQHGYTR--CDYDACVYHRKLSDGSHIYLLL--------YVDDMLIASKNMSEINK 1536

Query: 307  LKSQLSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            LKSQLSGEFEMK LGA KKILGM+I +DR+  +L +SQ+ Y+ KVL+ FGM  +K VS
Sbjct: 1537 LKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGMDKAKTVS 1594


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  111 bits (277), Expect = 3e-25
 Identities = 78/178 (43%), Positives = 99/178 (55%), Gaps = 21/178 (11%)
 Frame = +1

Query: 10   DLELGQLNVKMGCLHGRF*E--HISSTRGFVVDDKE---------YFGLK*SHRRWYKRF 156
            DLEL QL+VK   LHG   E  ++    GF V  KE          +GLK S R+WYKRF
Sbjct: 1406 DLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRF 1465

Query: 157  DTFMVDHMVIRGLCMTIVCI------KGSLVMALMCFTLVCK*HVD----CSEKHVNIKV 306
            D+FM+ H   R  C    C+       GS +  L+        +VD     S+    I  
Sbjct: 1466 DSFMIQHGYTR--CDYDACVYHRKLSDGSHIYLLL--------YVDDMLIASKNMSEINK 1515

Query: 307  LKSQLSGEFEMKILGAVKKILGMEISKDRQNHRLFLSQQQYLHKVLE*FGMLDSKPVS 480
            LKSQLSGEFEMK LGA KKILGM+I +DR+  +L +SQ+ Y+ KVL+ FGM  +K VS
Sbjct: 1516 LKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGMDKAKTVS 1573