BLASTX nr result
ID: Ophiopogon27_contig00032212
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00032212
(1511 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK75253.1| uncharacterized protein A4U43_C03F14950 [Asparagu... 468 e-158
ref|XP_020257102.1| DNA-directed RNA polymerase III subunit RPC5... 468 e-157
ref|XP_020257101.1| DNA-directed RNA polymerase III subunit RPC5... 468 e-157
ref|XP_008777120.1| PREDICTED: DNA-directed RNA polymerase III s... 343 e-107
ref|XP_008777118.1| PREDICTED: DNA-directed RNA polymerase III s... 343 e-107
ref|XP_010906546.1| PREDICTED: DNA-directed RNA polymerase III s... 329 e-101
ref|XP_010906545.1| PREDICTED: DNA-directed RNA polymerase III s... 329 e-101
ref|XP_010906544.1| PREDICTED: DNA-directed RNA polymerase III s... 329 e-101
gb|PKU70089.1| hypothetical protein MA16_Dca016373 [Dendrobium c... 319 4e-98
ref|XP_020698342.1| DNA-directed RNA polymerase III subunit RPC5... 319 4e-98
ref|XP_009392124.1| PREDICTED: DNA-directed RNA polymerase III s... 317 2e-97
ref|XP_020578730.1| DNA-directed RNA polymerase III subunit RPC5... 303 3e-92
ref|XP_020578729.1| DNA-directed RNA polymerase III subunit RPC5... 303 3e-92
gb|OVA04539.1| DNA-directed RNA polymerase III subunit Rpc5 [Mac... 290 3e-87
ref|XP_010254912.1| PREDICTED: DNA-directed RNA polymerase III s... 284 1e-84
ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III s... 266 1e-77
emb|CDP02819.1| unnamed protein product [Coffea canephora] 265 4e-77
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 262 3e-76
ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III s... 260 3e-75
ref|XP_021847883.1| DNA-directed RNA polymerase III subunit RPC5... 259 4e-75
>gb|ONK75253.1| uncharacterized protein A4U43_C03F14950 [Asparagus officinalis]
Length = 521
Score = 468 bits (1205), Expect = e-158
Identities = 246/399 (61%), Positives = 295/399 (73%), Gaps = 6/399 (1%)
Frame = +2
Query: 32 IDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDV 211
+DDA+PWV L HS +S D+YQKKMV+ K+NDIQF VK ++Y S LCPG+SSNKKG +
Sbjct: 127 LDDADPWVSLECHSIDSPLADSYQKKMVAEKNNDIQFTVKPHEYISFLCPGSSSNKKGAL 186
Query: 212 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 391
GPS+R LL +PLEERLKKW SEGPQVNRF++LLHLAP +S+EDVLKVL+ +A LVQGLWV
Sbjct: 187 GPSKRDLLLLPLEERLKKWFSEGPQVNRFSALLHLAPTNSVEDVLKVLKLYAHLVQGLWV 246
Query: 392 SKSSLRCDGVLARARDYILYQFTKSPVIHYDKHKPPPPFFKQILVQLAIQRPTLNDWKFK 571
+KSSL GV A ARDYIL F K+ VI YD K PP +QIL ++A+ RP+LNDWKFK
Sbjct: 247 AKSSLVYIGVEASARDYILSLFAKNCVIRYDTEKRLPPLVQQILGRIAVHRPSLNDWKFK 306
Query: 572 ESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHKKT 751
E DLSFIK YP+IVKEQE +W+GRV+QL SL GA KTKE+Q MD L+KSLNPHL KKT
Sbjct: 307 EPTDLSFIKCYPDIVKEQEQAWAGRVKQLRDSLVGAQKTKESQFMDNLIKSLNPHLLKKT 366
Query: 752 VDL------GSNGANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGSI 913
VDL +G + V S+ TTM NG RED+ K+L EIFHLHG L+AI K+L +
Sbjct: 367 VDLREVKHTPKDGIDNTVISSTTTMLNGTREDINKALLEIFHLHGARRLDAIRKDLTAAT 426
Query: 914 NXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRRA 1093
+ +IHGVY LKS RNP L LR F I LFR+K ANVKF+E DVR+A
Sbjct: 427 H----EVQSALSEVAVNIHGVYVLKSPRNPALKELRNFIISLFRQKKANVKFRELDVRKA 482
Query: 1094 AHNFLKRNISDSEFKQVVHELCISKGGGLSLKTADSDQK 1210
A N LKRNISDSEFK V++E CI GGG++LK+ DSDQK
Sbjct: 483 AQNHLKRNISDSEFKLVINEFCICTGGGVALKSGDSDQK 521
>ref|XP_020257102.1| DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Asparagus
officinalis]
Length = 589
Score = 468 bits (1205), Expect = e-157
Identities = 246/399 (61%), Positives = 295/399 (73%), Gaps = 6/399 (1%)
Frame = +2
Query: 32 IDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDV 211
+DDA+PWV L HS +S D+YQKKMV+ K+NDIQF VK ++Y S LCPG+SSNKKG +
Sbjct: 195 LDDADPWVSLECHSIDSPLADSYQKKMVAEKNNDIQFTVKPHEYISFLCPGSSSNKKGAL 254
Query: 212 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 391
GPS+R LL +PLEERLKKW SEGPQVNRF++LLHLAP +S+EDVLKVL+ +A LVQGLWV
Sbjct: 255 GPSKRDLLLLPLEERLKKWFSEGPQVNRFSALLHLAPTNSVEDVLKVLKLYAHLVQGLWV 314
Query: 392 SKSSLRCDGVLARARDYILYQFTKSPVIHYDKHKPPPPFFKQILVQLAIQRPTLNDWKFK 571
+KSSL GV A ARDYIL F K+ VI YD K PP +QIL ++A+ RP+LNDWKFK
Sbjct: 315 AKSSLVYIGVEASARDYILSLFAKNCVIRYDTEKRLPPLVQQILGRIAVHRPSLNDWKFK 374
Query: 572 ESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHKKT 751
E DLSFIK YP+IVKEQE +W+GRV+QL SL GA KTKE+Q MD L+KSLNPHL KKT
Sbjct: 375 EPTDLSFIKCYPDIVKEQEQAWAGRVKQLRDSLVGAQKTKESQFMDNLIKSLNPHLLKKT 434
Query: 752 VDL------GSNGANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGSI 913
VDL +G + V S+ TTM NG RED+ K+L EIFHLHG L+AI K+L +
Sbjct: 435 VDLREVKHTPKDGIDNTVISSTTTMLNGTREDINKALLEIFHLHGARRLDAIRKDLTAAT 494
Query: 914 NXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRRA 1093
+ +IHGVY LKS RNP L LR F I LFR+K ANVKF+E DVR+A
Sbjct: 495 H----EVQSALSEVAVNIHGVYVLKSPRNPALKELRNFIISLFRQKKANVKFRELDVRKA 550
Query: 1094 AHNFLKRNISDSEFKQVVHELCISKGGGLSLKTADSDQK 1210
A N LKRNISDSEFK V++E CI GGG++LK+ DSDQK
Sbjct: 551 AQNHLKRNISDSEFKLVINEFCICTGGGVALKSGDSDQK 589
>ref|XP_020257101.1| DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Asparagus
officinalis]
Length = 590
Score = 468 bits (1205), Expect = e-157
Identities = 246/399 (61%), Positives = 295/399 (73%), Gaps = 6/399 (1%)
Frame = +2
Query: 32 IDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDV 211
+DDA+PWV L HS +S D+YQKKMV+ K+NDIQF VK ++Y S LCPG+SSNKKG +
Sbjct: 196 LDDADPWVSLECHSIDSPLADSYQKKMVAEKNNDIQFTVKPHEYISFLCPGSSSNKKGAL 255
Query: 212 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 391
GPS+R LL +PLEERLKKW SEGPQVNRF++LLHLAP +S+EDVLKVL+ +A LVQGLWV
Sbjct: 256 GPSKRDLLLLPLEERLKKWFSEGPQVNRFSALLHLAPTNSVEDVLKVLKLYAHLVQGLWV 315
Query: 392 SKSSLRCDGVLARARDYILYQFTKSPVIHYDKHKPPPPFFKQILVQLAIQRPTLNDWKFK 571
+KSSL GV A ARDYIL F K+ VI YD K PP +QIL ++A+ RP+LNDWKFK
Sbjct: 316 AKSSLVYIGVEASARDYILSLFAKNCVIRYDTEKRLPPLVQQILGRIAVHRPSLNDWKFK 375
Query: 572 ESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHKKT 751
E DLSFIK YP+IVKEQE +W+GRV+QL SL GA KTKE+Q MD L+KSLNPHL KKT
Sbjct: 376 EPTDLSFIKCYPDIVKEQEQAWAGRVKQLRDSLVGAQKTKESQFMDNLIKSLNPHLLKKT 435
Query: 752 VDL------GSNGANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGSI 913
VDL +G + V S+ TTM NG RED+ K+L EIFHLHG L+AI K+L +
Sbjct: 436 VDLREVKHTPKDGIDNTVISSTTTMLNGTREDINKALLEIFHLHGARRLDAIRKDLTAAT 495
Query: 914 NXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRRA 1093
+ +IHGVY LKS RNP L LR F I LFR+K ANVKF+E DVR+A
Sbjct: 496 H----EVQSALSEVAVNIHGVYVLKSPRNPALKELRNFIISLFRQKKANVKFRELDVRKA 551
Query: 1094 AHNFLKRNISDSEFKQVVHELCISKGGGLSLKTADSDQK 1210
A N LKRNISDSEFK V++E CI GGG++LK+ DSDQK
Sbjct: 552 AQNHLKRNISDSEFKLVINEFCICTGGGVALKSGDSDQK 590
>ref|XP_008777120.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
[Phoenix dactylifera]
Length = 701
Score = 343 bits (879), Expect = e-107
Identities = 197/420 (46%), Positives = 257/420 (61%), Gaps = 31/420 (7%)
Frame = +2
Query: 32 IDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDV 211
I+D EPW+ L YH +S F + Y +KM + ++N IQF ++ DY + LCPGTS++KK
Sbjct: 286 INDYEPWISLEYHPIDSPFAERYHQKMAAEENNLIQFTMQPSDYVNTLCPGTSTDKKRTK 345
Query: 212 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 391
GP RRVLLSMPLEERLKKWL+EG QVNRF +L+HLAP +S +DVLKVLQ HA LVQGLWV
Sbjct: 346 GPPRRVLLSMPLEERLKKWLTEGSQVNRFDALMHLAPTNSEKDVLKVLQLHAYLVQGLWV 405
Query: 392 SKSSLRCDGVLARARDYILYQFTKSPVIHYDKHKPPPPF-FKQILVQLAIQRPTLNDWKF 568
+KSSL +G A ARD IL+ F+ +PVIH D K K IL LA++R +DWKF
Sbjct: 406 TKSSLLYEGFNALARDRILFLFSTNPVIHSDNLKTLRSAPLKHILSPLAVERSVFSDWKF 465
Query: 569 KESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHKK 748
KE+ D+SF+K+YP+IVKEQE +WS R EQ M +L GK + SL+P++ K
Sbjct: 466 KEATDISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGKNIHMMTKN----SLSPNIVKN 521
Query: 749 TVDLG------SNGANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL--- 901
T LG + +SS TTMS+ RE+L ++L +IF V SLN+I+ L
Sbjct: 522 TGALGRVDPDANRSKEGTMSSAGTTMSSETRENLPRALFKIFQEKRVRSLNSIVSGLRDL 581
Query: 902 ---------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPL 1018
K + +IHG+Y LKS+ NPTLDPL
Sbjct: 582 AISSSSRPRDDAKTKALANAAKNGADAPLPELQSVISQVAANIHGLYVLKSMGNPTLDPL 641
Query: 1019 RKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 1198
R IDLFR K N K K+Q++ +AA LKRNI+DSE+ QVV+ELC+S G L++ D
Sbjct: 642 RNVVIDLFRGKEPNAKLKKQEISKAAEFRLKRNITDSEYNQVVNELCVSSKGAWVLRSDD 701
>ref|XP_008777118.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
[Phoenix dactylifera]
ref|XP_008777119.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
[Phoenix dactylifera]
Length = 702
Score = 343 bits (879), Expect = e-107
Identities = 197/420 (46%), Positives = 257/420 (61%), Gaps = 31/420 (7%)
Frame = +2
Query: 32 IDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDV 211
I+D EPW+ L YH +S F + Y +KM + ++N IQF ++ DY + LCPGTS++KK
Sbjct: 287 INDYEPWISLEYHPIDSPFAERYHQKMAAEENNLIQFTMQPSDYVNTLCPGTSTDKKRTK 346
Query: 212 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 391
GP RRVLLSMPLEERLKKWL+EG QVNRF +L+HLAP +S +DVLKVLQ HA LVQGLWV
Sbjct: 347 GPPRRVLLSMPLEERLKKWLTEGSQVNRFDALMHLAPTNSEKDVLKVLQLHAYLVQGLWV 406
Query: 392 SKSSLRCDGVLARARDYILYQFTKSPVIHYDKHKPPPPF-FKQILVQLAIQRPTLNDWKF 568
+KSSL +G A ARD IL+ F+ +PVIH D K K IL LA++R +DWKF
Sbjct: 407 TKSSLLYEGFNALARDRILFLFSTNPVIHSDNLKTLRSAPLKHILSPLAVERSVFSDWKF 466
Query: 569 KESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHKK 748
KE+ D+SF+K+YP+IVKEQE +WS R EQ M +L GK + SL+P++ K
Sbjct: 467 KEATDISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGKNIHMMTKN----SLSPNIVKN 522
Query: 749 TVDLG------SNGANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL--- 901
T LG + +SS TTMS+ RE+L ++L +IF V SLN+I+ L
Sbjct: 523 TGALGRVDPDANRSKEGTMSSAGTTMSSETRENLPRALFKIFQEKRVRSLNSIVSGLRDL 582
Query: 902 ---------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPL 1018
K + +IHG+Y LKS+ NPTLDPL
Sbjct: 583 AISSSSRPRDDAKTKALANAAKNGADAPLPELQSVISQVAANIHGLYVLKSMGNPTLDPL 642
Query: 1019 RKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 1198
R IDLFR K N K K+Q++ +AA LKRNI+DSE+ QVV+ELC+S G L++ D
Sbjct: 643 RNVVIDLFRGKEPNAKLKKQEISKAAEFRLKRNITDSEYNQVVNELCVSSKGAWVLRSDD 702
>ref|XP_010906546.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
[Elaeis guineensis]
Length = 695
Score = 329 bits (844), Expect = e-101
Identities = 190/418 (45%), Positives = 254/418 (60%), Gaps = 31/418 (7%)
Frame = +2
Query: 38 DAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVGP 217
D EPW+ L YH + F + Y +KM + + N +QF +K DY + LCPGTS++KK GP
Sbjct: 282 DHEPWISLEYHPIDGPFAERYHQKMAAEEKNIVQFTMKPSDYVNTLCPGTSADKKRTRGP 341
Query: 218 SRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSK 397
RRVLLSMPLEERL KWL+E QVN F +L++LAP +S +DVLK+LQ HA LVQGLWV+K
Sbjct: 342 PRRVLLSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQLHAYLVQGLWVTK 401
Query: 398 SSLRCDGVLARARDYILYQFTKSPVIHYDKHKPPPPF-FKQILVQLAIQRPTLNDWKFKE 574
SSL +G A ARD+IL+ F+K+PVIH DK K K IL LA++R +DWKFKE
Sbjct: 402 SSLLYEGFNALARDHILFLFSKNPVIHSDKLKTLRSAPLKHILSTLAVERSVFSDWKFKE 461
Query: 575 SADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHKKT- 751
D+SF+K+YP+IVKEQE +WS R EQ M +L G+ + SL+P++ K T
Sbjct: 462 PTDISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGRNIHMMTKN----SLSPNIMKNTG 517
Query: 752 ----VDLGSNGANK-IVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL----- 901
VD +N + + +SS TTMS+ RE+L ++L +IF V S+N+I+ L
Sbjct: 518 AAGRVDPDANRSKEGTMSSAGTTMSSETRENLPRALLKIFQEKRVRSINSIVSGLRDLAI 577
Query: 902 -------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRK 1024
K + +IHG+Y LKS+ NP LDPLR
Sbjct: 578 SSSSRPRDDPKTKALVNAAKSGADAPLPELQSVISQVAVNIHGLYVLKSMGNPALDPLRN 637
Query: 1025 FFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 1198
IDLFR K N K K+Q++ +AA LKRNI+DSE+ QVV+ELC+S G L++ D
Sbjct: 638 VVIDLFRGKEPNAKLKKQEICKAAEFRLKRNITDSEYNQVVNELCVSSKGAWVLRSDD 695
>ref|XP_010906545.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
[Elaeis guineensis]
Length = 701
Score = 329 bits (844), Expect = e-101
Identities = 190/418 (45%), Positives = 254/418 (60%), Gaps = 31/418 (7%)
Frame = +2
Query: 38 DAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVGP 217
D EPW+ L YH + F + Y +KM + + N +QF +K DY + LCPGTS++KK GP
Sbjct: 288 DHEPWISLEYHPIDGPFAERYHQKMAAEEKNIVQFTMKPSDYVNTLCPGTSADKKRTRGP 347
Query: 218 SRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSK 397
RRVLLSMPLEERL KWL+E QVN F +L++LAP +S +DVLK+LQ HA LVQGLWV+K
Sbjct: 348 PRRVLLSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQLHAYLVQGLWVTK 407
Query: 398 SSLRCDGVLARARDYILYQFTKSPVIHYDKHKPPPPF-FKQILVQLAIQRPTLNDWKFKE 574
SSL +G A ARD+IL+ F+K+PVIH DK K K IL LA++R +DWKFKE
Sbjct: 408 SSLLYEGFNALARDHILFLFSKNPVIHSDKLKTLRSAPLKHILSTLAVERSVFSDWKFKE 467
Query: 575 SADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHKKT- 751
D+SF+K+YP+IVKEQE +WS R EQ M +L G+ + SL+P++ K T
Sbjct: 468 PTDISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGRNIHMMTKN----SLSPNIMKNTG 523
Query: 752 ----VDLGSNGANK-IVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL----- 901
VD +N + + +SS TTMS+ RE+L ++L +IF V S+N+I+ L
Sbjct: 524 AAGRVDPDANRSKEGTMSSAGTTMSSETRENLPRALLKIFQEKRVRSINSIVSGLRDLAI 583
Query: 902 -------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRK 1024
K + +IHG+Y LKS+ NP LDPLR
Sbjct: 584 SSSSRPRDDPKTKALVNAAKSGADAPLPELQSVISQVAVNIHGLYVLKSMGNPALDPLRN 643
Query: 1025 FFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 1198
IDLFR K N K K+Q++ +AA LKRNI+DSE+ QVV+ELC+S G L++ D
Sbjct: 644 VVIDLFRGKEPNAKLKKQEICKAAEFRLKRNITDSEYNQVVNELCVSSKGAWVLRSDD 701
>ref|XP_010906544.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
[Elaeis guineensis]
Length = 702
Score = 329 bits (844), Expect = e-101
Identities = 190/418 (45%), Positives = 254/418 (60%), Gaps = 31/418 (7%)
Frame = +2
Query: 38 DAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVGP 217
D EPW+ L YH + F + Y +KM + + N +QF +K DY + LCPGTS++KK GP
Sbjct: 289 DHEPWISLEYHPIDGPFAERYHQKMAAEEKNIVQFTMKPSDYVNTLCPGTSADKKRTRGP 348
Query: 218 SRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSK 397
RRVLLSMPLEERL KWL+E QVN F +L++LAP +S +DVLK+LQ HA LVQGLWV+K
Sbjct: 349 PRRVLLSMPLEERLNKWLTECSQVNHFDALMYLAPTNSEKDVLKLLQLHAYLVQGLWVTK 408
Query: 398 SSLRCDGVLARARDYILYQFTKSPVIHYDKHKPPPPF-FKQILVQLAIQRPTLNDWKFKE 574
SSL +G A ARD+IL+ F+K+PVIH DK K K IL LA++R +DWKFKE
Sbjct: 409 SSLLYEGFNALARDHILFLFSKNPVIHSDKLKTLRSAPLKHILSTLAVERSVFSDWKFKE 468
Query: 575 SADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHKKT- 751
D+SF+K+YP+IVKEQE +WS R EQ M +L G+ + SL+P++ K T
Sbjct: 469 PTDISFLKRYPDIVKEQECAWSSREEQFMDNLRRFGRNIHMMTKN----SLSPNIMKNTG 524
Query: 752 ----VDLGSNGANK-IVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL----- 901
VD +N + + +SS TTMS+ RE+L ++L +IF V S+N+I+ L
Sbjct: 525 AAGRVDPDANRSKEGTMSSAGTTMSSETRENLPRALLKIFQEKRVRSINSIVSGLRDLAI 584
Query: 902 -------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRK 1024
K + +IHG+Y LKS+ NP LDPLR
Sbjct: 585 SSSSRPRDDPKTKALVNAAKSGADAPLPELQSVISQVAVNIHGLYVLKSMGNPALDPLRN 644
Query: 1025 FFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 1198
IDLFR K N K K+Q++ +AA LKRNI+DSE+ QVV+ELC+S G L++ D
Sbjct: 645 VVIDLFRGKEPNAKLKKQEICKAAEFRLKRNITDSEYNQVVNELCVSSKGAWVLRSDD 702
>gb|PKU70089.1| hypothetical protein MA16_Dca016373 [Dendrobium catenatum]
Length = 657
Score = 319 bits (817), Expect = 4e-98
Identities = 177/386 (45%), Positives = 242/386 (62%), Gaps = 3/386 (0%)
Frame = +2
Query: 44 EPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVGPSR 223
EPWV L YHS +S + Y+++ + G N I A+K DY TS + GPS+
Sbjct: 269 EPWVLLEYHSSDSPVSCIYREQTLKGGRNYIPLAMKSSDYLDSCGSATSGFTRKTTGPSK 328
Query: 224 RVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSKSS 403
R LL+ PLEERLK+WLSEGPQVNRF +LLHLAPNDS+EDVLK+LQ HA LVQGLWVSKSS
Sbjct: 329 RYLLTRPLEERLKQWLSEGPQVNRFVALLHLAPNDSVEDVLKLLQHHAYLVQGLWVSKSS 388
Query: 404 LRCDGVLARARDYILYQFTKSPVIHYD--KHKPPPPFFKQILVQLAIQRPTLNDWKFKES 577
L DG+ A RDYIL QF+K +H K P K +L LA++R L DWKFKE
Sbjct: 389 LLHDGLSALYRDYILLQFSKKHAVHESILKLVKPEDLRKSLLKPLAVERSLLKDWKFKED 448
Query: 578 ADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHKKTVD 757
DLSFIKQYP IVKEQE +WS R ++++ SL+G+GK + + ++ S + + K +++
Sbjct: 449 RDLSFIKQYPEIVKEQEQAWSVREKKILESLHGSGKNISSSLKSSVSPSTS-SITKGSIE 507
Query: 758 LGSN-GANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGSINXXXXXX 934
LG + N + SS +TM +E L K++ E+ + VLSLN+I++ L+G+ N
Sbjct: 508 LGHHKDRNDVRSSVVSTMPTKGQEALEKAILELLRTYKVLSLNSIVQGLQGNANAGLPEI 567
Query: 935 XXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRRAAHNFLKR 1114
+H VY LKSL P+LD R I+ K N K K+Q+++ AA LK+
Sbjct: 568 ENVADQIAMKVHDVYVLKSLGKPSLDKFRHVVIEYLIGKGRNAKVKKQEIKLAAQYRLKK 627
Query: 1115 NISDSEFKQVVHELCISKGGGLSLKT 1192
++SD+E+ V++ELC+S GG LK+
Sbjct: 628 DVSDAEYSMVMNELCLSSGGSWMLKS 653
>ref|XP_020698342.1| DNA-directed RNA polymerase III subunit RPC5 [Dendrobium catenatum]
Length = 657
Score = 319 bits (817), Expect = 4e-98
Identities = 177/386 (45%), Positives = 242/386 (62%), Gaps = 3/386 (0%)
Frame = +2
Query: 44 EPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVGPSR 223
EPWV L YHS +S + Y+++ + G N I A+K DY TS + GPS+
Sbjct: 269 EPWVLLEYHSSDSPVSCIYREQTLKGGRNYIPLAMKSSDYLDSCGSATSGFTRKTTGPSK 328
Query: 224 RVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSKSS 403
R LL+ PLEERLK+WLSEGPQVNRF +LLHLAPNDS+EDVLK+LQ HA LVQGLWVSKSS
Sbjct: 329 RYLLTRPLEERLKQWLSEGPQVNRFVALLHLAPNDSVEDVLKLLQHHAYLVQGLWVSKSS 388
Query: 404 LRCDGVLARARDYILYQFTKSPVIHYD--KHKPPPPFFKQILVQLAIQRPTLNDWKFKES 577
L DG+ A RDYIL QF+K +H K P K +L LA++R L DWKFKE
Sbjct: 389 LLHDGLSALYRDYILLQFSKKHAVHESILKLVKPEDLRKSLLKPLAVERSLLKDWKFKED 448
Query: 578 ADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHKKTVD 757
DLSFIKQYP IVKEQE +WS R ++++ SL+G+GK + + ++ S + + K +++
Sbjct: 449 RDLSFIKQYPEIVKEQEQAWSVREKKILESLHGSGKNISSSLKSSVSPSTS-SITKGSIE 507
Query: 758 LGSN-GANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGSINXXXXXX 934
LG + N + SS +TM +E L K++ E+ + VLSLN+I++ L+G+ N
Sbjct: 508 LGHHKDRNDVRSSVVSTMPTKGQEALEKAILELLRTYKVLSLNSIVQGLQGNANAGLPEI 567
Query: 935 XXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRRAAHNFLKR 1114
+H VY LKSL P+LD R I+ K N K K+Q+++ AA LK+
Sbjct: 568 ENVADQIAMKVHDVYVLKSLGKPSLDKFRHVVIEYLIGKGRNAKVKKQEIKLAAQYRLKK 627
Query: 1115 NISDSEFKQVVHELCISKGGGLSLKT 1192
++SD+E+ V++ELC+S GG LK+
Sbjct: 628 DVSDAEYSMVMNELCLSSGGSWMLKS 653
>ref|XP_009392124.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Musa
acuminata subsp. malaccensis]
Length = 672
Score = 317 bits (813), Expect = 2e-97
Identities = 183/420 (43%), Positives = 246/420 (58%), Gaps = 30/420 (7%)
Frame = +2
Query: 29 RIDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGD 208
+I+D EPW+ L YH+ +S FT+ Y +KMV+ N I F +K DY S LCPG SS+ K
Sbjct: 262 KIEDDEPWISLEYHAVDSHFTERYHRKMVAEAKNQIPFMMKPSDYVSSLCPGASSDNKRT 321
Query: 209 VGPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLW 388
GPSRR+LL++PLEERLKKWLSEG Q+NRF +L+HLAP+ S EDVL L +A LVQGLW
Sbjct: 322 KGPSRRLLLTLPLEERLKKWLSEGCQINRFDALMHLAPDSSKEDVLNALPLYAVLVQGLW 381
Query: 389 VSKSSLRCDGVLARARDYILYQFTKSPVIHYDKHKPPP-PFFKQILVQLAIQRPTLNDWK 565
VSKS+L +G +A RD+IL F+++P+IH DK K K ++ LA++R +DWK
Sbjct: 382 VSKSTLLYEGKVALVRDFILCLFSRNPIIHLDKLKMIKFDGLKSLMSSLAVERRAFSDWK 441
Query: 566 FKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHK 745
FKE+ D SFIK+YP+IVK QE WS + +L G K+ M SLNP K
Sbjct: 442 FKEATDFSFIKKYPDIVKNQECVWS----DIEKTLPGFCKS-----MPMSKSSLNPSSSK 492
Query: 746 KTVDLGSNG-----ANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL--- 901
+ + + ++ VS+ T+MS+ +E L K+L +IF + SLN+++ L
Sbjct: 493 RVTSVKVDADAHVVKDRAVSTAVTSMSSETQEHLPKALLKIFQEKRIRSLNSVVHGLREL 552
Query: 902 ---------------------KGSINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPL 1018
K + ++HGVY LKS NP LDPL
Sbjct: 553 AISKSFRPRDDSKIKALISAAKSGASAPASELQSIVSQIAMNVHGVYVLKSTGNPALDPL 612
Query: 1019 RKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 1198
R IDLFR K N K +Q++R AA LK++ISDSE+ QVVHELC+S G LK+ D
Sbjct: 613 RNVVIDLFRGKEPNAKINKQEIRIAAQTRLKKDISDSEYNQVVHELCVSSRGSWILKSGD 672
>ref|XP_020578730.1| DNA-directed RNA polymerase III subunit RPC5 isoform X2 [Phalaenopsis
equestris]
Length = 650
Score = 303 bits (777), Expect = 3e-92
Identities = 176/392 (44%), Positives = 240/392 (61%), Gaps = 5/392 (1%)
Frame = +2
Query: 32 IDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDV 211
I+ EPWV L YH+ +S+ + Y ++ ++ N + +K DY + P TS + +
Sbjct: 258 INTDEPWVLLEYHAGDSTNSLIYSERALTDGRNRMPLDMKLPDYVNSFDPATSGCMRKTI 317
Query: 212 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 391
G +R LL+ PLE+RLK+WLSEGPQVNRF +LLHLAPNDS+EDVL LQ++A LVQGLWV
Sbjct: 318 GSLKRDLLTKPLEDRLKQWLSEGPQVNRFTALLHLAPNDSVEDVLTQLQRYAYLVQGLWV 377
Query: 392 SKSSLRCDGVLARARDYILYQFTKSPVIHYDKHK--PPPPFFKQILVQLAIQRPTLNDWK 565
SKSSL DG+ A RDYIL QF+K +H K K P K +L LA++RP L DWK
Sbjct: 378 SKSSLFHDGLPALYRDYILLQFSKLHAVHDSKLKVVKPEDLRKSLLKPLAVERPLLQDWK 437
Query: 566 FKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMD--TLVKSLNPHL 739
FKE D SFIKQYP IVKEQE +WS R ++++ SL G++ + + + L S P+
Sbjct: 438 FKEDTDSSFIKQYPEIVKEQELAWSVREKEILESLPAGGRSFSSVLKNYANLGISSKPN- 496
Query: 740 HKKTVDLGSN-GANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGSIN 916
+++ G N + + SS M N +E L KS+ E+ HL+ VLSLN+II+ L+G N
Sbjct: 497 --GSIEPGHNRDRSDLKSSVFANMPNKRQEPLAKSILELLHLYKVLSLNSIIQGLQGKTN 554
Query: 917 XXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRRAA 1096
IH +Y LKSL PTLD R I+ F K N K K+Q+++ AA
Sbjct: 555 AGSAEVQSAADQIALKIHDIYVLKSLGKPTLDQFRNVVIEYFIGKGRNAKVKKQEIKLAA 614
Query: 1097 HNFLKRNISDSEFKQVVHELCISKGGGLSLKT 1192
LKR +SD ++ QV++ELC+S GG LK+
Sbjct: 615 QYRLKRVVSDVDYGQVMNELCVSSGGSWMLKS 646
>ref|XP_020578729.1| DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Phalaenopsis
equestris]
Length = 655
Score = 303 bits (777), Expect = 3e-92
Identities = 176/392 (44%), Positives = 240/392 (61%), Gaps = 5/392 (1%)
Frame = +2
Query: 32 IDDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDV 211
I+ EPWV L YH+ +S+ + Y ++ ++ N + +K DY + P TS + +
Sbjct: 263 INTDEPWVLLEYHAGDSTNSLIYSERALTDGRNRMPLDMKLPDYVNSFDPATSGCMRKTI 322
Query: 212 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 391
G +R LL+ PLE+RLK+WLSEGPQVNRF +LLHLAPNDS+EDVL LQ++A LVQGLWV
Sbjct: 323 GSLKRDLLTKPLEDRLKQWLSEGPQVNRFTALLHLAPNDSVEDVLTQLQRYAYLVQGLWV 382
Query: 392 SKSSLRCDGVLARARDYILYQFTKSPVIHYDKHK--PPPPFFKQILVQLAIQRPTLNDWK 565
SKSSL DG+ A RDYIL QF+K +H K K P K +L LA++RP L DWK
Sbjct: 383 SKSSLFHDGLPALYRDYILLQFSKLHAVHDSKLKVVKPEDLRKSLLKPLAVERPLLQDWK 442
Query: 566 FKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMD--TLVKSLNPHL 739
FKE D SFIKQYP IVKEQE +WS R ++++ SL G++ + + + L S P+
Sbjct: 443 FKEDTDSSFIKQYPEIVKEQELAWSVREKEILESLPAGGRSFSSVLKNYANLGISSKPN- 501
Query: 740 HKKTVDLGSN-GANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKGSIN 916
+++ G N + + SS M N +E L KS+ E+ HL+ VLSLN+II+ L+G N
Sbjct: 502 --GSIEPGHNRDRSDLKSSVFANMPNKRQEPLAKSILELLHLYKVLSLNSIIQGLQGKTN 559
Query: 917 XXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLFRKKNANVKFKEQDVRRAA 1096
IH +Y LKSL PTLD R I+ F K N K K+Q+++ AA
Sbjct: 560 AGSAEVQSAADQIALKIHDIYVLKSLGKPTLDQFRNVVIEYFIGKGRNAKVKKQEIKLAA 619
Query: 1097 HNFLKRNISDSEFKQVVHELCISKGGGLSLKT 1192
LKR +SD ++ QV++ELC+S GG LK+
Sbjct: 620 QYRLKRVVSDVDYGQVMNELCVSSGGSWMLKS 651
>gb|OVA04539.1| DNA-directed RNA polymerase III subunit Rpc5 [Macleaya cordata]
Length = 646
Score = 290 bits (743), Expect = 3e-87
Identities = 177/419 (42%), Positives = 239/419 (57%), Gaps = 30/419 (7%)
Frame = +2
Query: 44 EPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVGPSR 223
+ WV L YH +S F+ Y++KM + + IQF++ YDY + LCPG+S+ GPSR
Sbjct: 235 QSWVSLEYHGTDSIFSSRYRQKMTAQESTQIQFSMNPYDYVNSLCPGSSTEDNRTKGPSR 294
Query: 224 RVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSKSS 403
R LS+PLEER K WLSEGP VNRF +L HLAP+DS E VL VLQ HADLVQGLWVSKSS
Sbjct: 295 RFFLSLPLEERFKTWLSEGPHVNRFNALKHLAPDDSNEIVLGVLQHHADLVQGLWVSKSS 354
Query: 404 -LRCDGVLARARDYILYQFTKSPVIH---YDKHKPPPPFFKQILVQLAIQRPTLNDWKFK 571
L+ GV A RDY+L F K+ +I+ D P K++L+ LA+ RPT DWKFK
Sbjct: 355 LLQHKGVEALTRDYVLLLFRKNALINQKKLDDSGLPKDVLKRVLIPLAVYRPTFKDWKFK 414
Query: 572 ESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHKKT 751
E DL+FIK + +IV+EQE W R +++M ++ G G++ + SL P K+
Sbjct: 415 EPTDLAFIKDHADIVQEQEKLWGIREKKVMETV-GPGRSGPVR------NSLRPSTATKS 467
Query: 752 VDLG--SNGANKIVSSTET--TMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKG---- 907
G GA K V+ T + TMS+ RE L K+L E+ H V SL I + L+
Sbjct: 468 AASGKADQGAKKNVNGTPSTVTMSDETREALPKALEELLRRHKVCSLQLIRQGLRDLAVS 527
Query: 908 -----------------SINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFID 1036
+ +IHGVY K+ NPTL+PLR I+
Sbjct: 528 KSALPKLHPKAAVAAGYGADAPPSELQSVISQVAINIHGVYVSKTSENPTLNPLRSVVIN 587
Query: 1037 LFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCIS-KGGGLSLKTADSDQK 1210
LF K N K K+ D+ AA LKR+IS++E+ QVV+E+C+S +G LK+ D ++K
Sbjct: 588 LFSGKEPNAKLKKADIVEAAKIILKRDISNAEYNQVVNEICVSVRGNSWVLKSGDGNEK 646
>ref|XP_010254912.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Nelumbo
nucifera]
Length = 680
Score = 284 bits (727), Expect = 1e-84
Identities = 170/414 (41%), Positives = 230/414 (55%), Gaps = 26/414 (6%)
Frame = +2
Query: 35 DDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVG 214
DDAE WV L YH +SS + YQ+KMV+ + + IQF++ YDY + LCPGTSS+ G
Sbjct: 270 DDAESWVSLEYHQIDSSISRGYQQKMVARESSPIQFSMNSYDYLNSLCPGTSSDNNRVKG 329
Query: 215 PSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVS 394
PSRR LLS+PLEER K +LS+G QV RF +L H AP+ S ED+L VLQ +ADLVQGLWV+
Sbjct: 330 PSRRFLLSLPLEERFKIFLSKGTQVYRFTALKHFAPDKSDEDLLAVLQGYADLVQGLWVT 389
Query: 395 KSSLRCDGVLARARDYILYQFTKSPVIHYDKHKP---PPPFFKQILVQLAIQRPTLNDWK 565
KS+L C+GV A ARDY+L F+K P+I Y+K K++L LAI+RP+ DWK
Sbjct: 390 KSALLCEGVQALARDYVLLCFSKGPLISYEKLNETGLSRDILKRVLNSLAIERPSFKDWK 449
Query: 566 FKESADLSFIKQYPNIVKEQEFSWSGR---VEQLMASLYGAGKTKETQVMDTLVKSLNPH 736
FKE D+ F K +P+IV+EQ+ W R ++ LM G T + + + S N
Sbjct: 450 FKEPTDMLFTKNFPDIVREQQHRWEIREKKIKDLMHRPVKGGPTMKQNITNRPRTSSNAD 509
Query: 737 LHKKTVDLGSNGANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKG--- 907
K G+ G + S ET RE L K+L E+F +H V SL I + L+
Sbjct: 510 QSAKVNVNGTLGCGTVTMSDET------REALPKALRELFRIHKVCSLQLICQGLRDLAV 563
Query: 908 ----------------SINXXXXXXXXXXXXXXXDIHGVYALKSL-RNPTLDPLRKFFID 1036
++ ++HGVY LKS +P LDPLR I+
Sbjct: 564 SKNNKAHARAAVAAAQGVSAPLPELQAVIDQVAINVHGVYVLKSSEEHPELDPLRNVVIN 623
Query: 1037 LFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 1198
LF K N K +++ AA L+R I+ +E +V ELCIS+ LK+ D
Sbjct: 624 LFCAKGPNACLKREEIFEAAKIALERTITPNELMKVTSELCISRSNAWFLKSGD 677
>ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
[Vitis vinifera]
emb|CBI17549.3| unnamed protein product, partial [Vitis vinifera]
Length = 688
Score = 266 bits (680), Expect = 1e-77
Identities = 169/424 (39%), Positives = 224/424 (52%), Gaps = 32/424 (7%)
Frame = +2
Query: 35 DDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCP-GTSSNKKGDV 211
D AE WVPL YHS ES F+ Y +KMV+ ++ IQF + Y+Y + LCP G S++
Sbjct: 270 DAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSK 329
Query: 212 GPSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWV 391
G SRR LLSMPLEER K L EGP V+RF++L H AP++S+EDVL VL +HA LVQGLWV
Sbjct: 330 GLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWV 389
Query: 392 SKSSLRC---DGVLARARDYILYQFTKSPVIHYDKHKPPPPF---FKQILVQLAIQRPTL 553
KSSL GV ARDYIL F+K P+I+Y + P K L LA++RP+
Sbjct: 390 PKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSF 449
Query: 554 NDWKFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNP 733
DWKFKE D+SF+K +P+IV+EQ W +Q+ ++G G+ S P
Sbjct: 450 RDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRG-----PVTKNSGKP 504
Query: 734 HLHKKT-VDLGSNGANKIVSST---ETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKEL 901
+ KT S+GA + + T T MS RE L K+L E+F LH V S I + L
Sbjct: 505 SIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQAL 564
Query: 902 KG---------------------SINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPL 1018
+ + +HGVY K+ + +PL
Sbjct: 565 RDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPL 624
Query: 1019 RKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTAD 1198
RK +DLF K N K K D+ AA LK+ I+ E+ +VV ELC S+G LK+ D
Sbjct: 625 RKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGD 684
Query: 1199 SDQK 1210
K
Sbjct: 685 GKPK 688
>emb|CDP02819.1| unnamed protein product [Coffea canephora]
Length = 687
Score = 265 bits (676), Expect = 4e-77
Identities = 158/420 (37%), Positives = 224/420 (53%), Gaps = 28/420 (6%)
Frame = +2
Query: 35 DDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVG 214
D E W+PL YH S + +Y +KMV + IQF++ ++DY + LCPGTS+ G G
Sbjct: 270 DTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMNRHDYVNTLCPGTSNENNGSNG 329
Query: 215 PSRRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVS 394
PSRRVLLS+PLEER + WL +GP ++RF +L HLAP+ S+ED+L VL QHA LVQGLW+
Sbjct: 330 PSRRVLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIP 389
Query: 395 KSSL---RCDGVLARARDYILYQFTKSPVIHYDKHKPPPPF---FKQILVQLAIQRPTLN 556
KSSL + G+ A ARDY+L F+++P+I+ + + +L +A +R +LN
Sbjct: 390 KSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLNTVAFERASLN 449
Query: 557 DWKFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPH 736
DWKFKE D++FIK IV+EQE +W + + ++G T+ + + NP
Sbjct: 450 DWKFKEPPDMTFIKLNSKIVREQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPA 509
Query: 737 LHKKTVDLGSNGANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELK---- 904
K SN N V MS RE L K+L ++F H V S I + L+
Sbjct: 510 TSKSLSKHASNSLNAGV--PRRPMSEETREALPKALQKLFQSHKVCSFQQICQRLREMAV 567
Query: 905 -----------------GSINXXXXXXXXXXXXXXXDIHGVYALKSLR-NPTLDPLRKFF 1030
+ +IHGVY LKS +P D RK
Sbjct: 568 SESSRPKGFAREAIAAAHGVEAPPEELQAIISQVAINIHGVYVLKSSPVHPEHDEFRKVV 627
Query: 1031 IDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTADSDQK 1210
IDLF + N K K+ + AA LKR+I+ E+++VV ELC+S+G LK+ D + K
Sbjct: 628 IDLFIAEGPNAKLKKASMIEAAKLQLKRDINSLEYQKVVQELCVSQGSAWVLKSGDGNPK 687
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4
[Vitis vinifera]
Length = 672
Score = 262 bits (669), Expect = 3e-76
Identities = 166/421 (39%), Positives = 222/421 (52%), Gaps = 32/421 (7%)
Frame = +2
Query: 44 EPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCP-GTSSNKKGDVGPS 220
+ WVPL YHS ES F+ Y +KMV+ ++ IQF + Y+Y + LCP G S++ G S
Sbjct: 257 QSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLS 316
Query: 221 RRVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSKS 400
RR LLSMPLEER K L EGP V+RF++L H AP++S+EDVL VL +HA LVQGLWV KS
Sbjct: 317 RRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKS 376
Query: 401 SLRC---DGVLARARDYILYQFTKSPVIHYDKHKPPPPF---FKQILVQLAIQRPTLNDW 562
SL GV ARDYIL F+K P+I+Y + P K L LA++RP+ DW
Sbjct: 377 SLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDW 436
Query: 563 KFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLH 742
KFKE D+SF+K +P+IV+EQ W +Q+ ++G G+ S P +
Sbjct: 437 KFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRG-----PVTKNSGKPSIA 491
Query: 743 KKT-VDLGSNGANKIVSST---ETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKG- 907
KT S+GA + + T T MS RE L K+L E+F LH V S I + L+
Sbjct: 492 NKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDL 551
Query: 908 --------------------SINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKF 1027
+ +HGVY K+ + +PLRK
Sbjct: 552 AVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKV 611
Query: 1028 FIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTADSDQ 1207
+DLF K N K K D+ AA LK+ I+ E+ +VV ELC S+G LK+ D
Sbjct: 612 VVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDGKP 671
Query: 1208 K 1210
K
Sbjct: 672 K 672
>ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
[Vitis vinifera]
ref|XP_010649169.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
[Vitis vinifera]
Length = 693
Score = 260 bits (664), Expect = 3e-75
Identities = 169/429 (39%), Positives = 224/429 (52%), Gaps = 37/429 (8%)
Frame = +2
Query: 35 DDAEPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCP-GTSSNKKGDV 211
D AE WVPL YHS ES F+ Y +KMV+ ++ IQF + Y+Y + LCP G S++
Sbjct: 270 DAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSK 329
Query: 212 GPSRRVLLSMPLEERLKKWLSE-----GPQVNRFASLLHLAPNDSIEDVLKVLQQHADLV 376
G SRR LLSMPLEER K L E GP V+RF++L H AP++S+EDVL VL +HA LV
Sbjct: 330 GLSRRFLLSMPLEERFKTLLCEKFSLQGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLV 389
Query: 377 QGLWVSKSSLRC---DGVLARARDYILYQFTKSPVIHYDKHKPPPPF---FKQILVQLAI 538
QGLWV KSSL GV ARDYIL F+K P+I+Y + P K L LA+
Sbjct: 390 QGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAV 449
Query: 539 QRPTLNDWKFKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLV 718
+RP+ DWKFKE D+SF+K +P+IV+EQ W +Q+ ++G G+
Sbjct: 450 ERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRG-----PVTK 504
Query: 719 KSLNPHLHKKT-VDLGSNGANKIVSST---ETTMSNGFREDLIKSLSEIFHLHGVLSLNA 886
S P + KT S+GA + + T T MS RE L K+L E+F LH V S
Sbjct: 505 NSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQL 564
Query: 887 IIKELKG---------------------SINXXXXXXXXXXXXXXXDIHGVYALKSLRNP 1003
I + L+ + +HGVY K+ +
Sbjct: 565 ICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHS 624
Query: 1004 TLDPLRKFFIDLFRKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLS 1183
+PLRK +DLF K N K K D+ AA LK+ I+ E+ +VV ELC S+G
Sbjct: 625 EHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWV 684
Query: 1184 LKTADSDQK 1210
LK+ D K
Sbjct: 685 LKSGDGKPK 693
>ref|XP_021847883.1| DNA-directed RNA polymerase III subunit RPC5 [Spinacia oleracea]
gb|KNA22786.1| hypothetical protein SOVF_031230 [Spinacia oleracea]
Length = 663
Score = 259 bits (661), Expect = 4e-75
Identities = 156/416 (37%), Positives = 217/416 (52%), Gaps = 27/416 (6%)
Frame = +2
Query: 44 EPWVPLVYHSFESSFTDNYQKKMVSGKDNDIQFAVKQYDYASILCPGTSSNKKGDVGPSR 223
E W+ L YHS + + Y +KM++ + + +QF + YDY + LCPG NK GPSR
Sbjct: 260 ESWISLKYHSSGTELAERYLRKMMTEQKDPLQFLMNPYDYLNSLCPGAVINKMTSRGPSR 319
Query: 224 RVLLSMPLEERLKKWLSEGPQVNRFASLLHLAPNDSIEDVLKVLQQHADLVQGLWVSKSS 403
R LLS+PLEERLK WL EGP V RF ++ HLAP+D +EDVL++LQ++A LVQGLWVSKSS
Sbjct: 320 RSLLSLPLEERLKTWLVEGPSVQRFNAIKHLAPDDPVEDVLEILQKYACLVQGLWVSKSS 379
Query: 404 LRCD---GVLARARDYILYQFTKSPVI---HYDKHKPPPPFFKQILVQLAIQRPTLNDWK 565
+R G RDY L F++SPVI D K +L ++A++RP DWK
Sbjct: 380 IRHPTGKGPEVLVRDYALLLFSQSPVIKDSELDILGSQKSTGKVVLREIAVERPNCKDWK 439
Query: 566 FKESADLSFIKQYPNIVKEQEFSWSGRVEQLMASLYGAGKTKETQVMDTLVKSLNPHLHK 745
FKE D+SFIK YP++V++Q W R + ++ + G LN
Sbjct: 440 FKEPTDVSFIKLYPDVVEQQLKLWQDREQVILQRIMGRRP------------KLNRPGSS 487
Query: 746 KTVDLGSNGANKIVSSTETTMSNGFREDLIKSLSEIFHLHGVLSLNAIIKELKG------ 907
D GS A + S +MS +E L K L ++F H V S I + L+
Sbjct: 488 MQSDEGSVKATNVARSASISMSKETQEALPKILKKLFQSHKVCSFQTICQGLRDMAVSMS 547
Query: 908 ---------------SINXXXXXXXXXXXXXXXDIHGVYALKSLRNPTLDPLRKFFIDLF 1042
++ ++HGVY LKS +P D LRK IDLF
Sbjct: 548 ALPKTDGRAAVAAAKGVDAPQEELQAAICEIAYNVHGVYVLKSSEHPEFDSLRKLVIDLF 607
Query: 1043 RKKNANVKFKEQDVRRAAHNFLKRNISDSEFKQVVHELCISKGGGLSLKTADSDQK 1210
N K K+ + AA L++ ++SEF++V+ E+C+SKGG LK+ D K
Sbjct: 608 LGSGPNAKLKKGEFMEAAKIRLQKEPTNSEFQKVITEMCVSKGGAWVLKSGDGVPK 663