BLASTX nr result

ID: Ophiopogon27_contig00031820 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00031820
         (662 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020275536.1| uncharacterized protein LOC109850045 [Aspara...    61   1e-08
gb|ONK63939.1| uncharacterized protein A4U43_C07F20470 [Asparagu...    61   2e-08
ref|XP_020253987.1| GATA transcription factor 5-like [Asparagus ...    56   1e-05

>ref|XP_020275536.1| uncharacterized protein LOC109850045 [Asparagus officinalis]
          Length = 115

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +2

Query: 2   FPSSEGEGCRVTATSDETKICDEINIHEDWITNFLDDSNFDID 130
           FP+S GEG RVT  S+E K+C+EI   +DWITNFLDDSNF +D
Sbjct: 57  FPNS-GEGSRVTTASEENKVCEEIEGVDDWITNFLDDSNFKLD 98


>gb|ONK63939.1| uncharacterized protein A4U43_C07F20470 [Asparagus officinalis]
          Length = 137

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +2

Query: 2   FPSSEGEGCRVTATSDETKICDEINIHEDWITNFLDDSNFDID 130
           FP+S GEG RVT  S+E K+C+EI   +DWITNFLDDSNF +D
Sbjct: 79  FPNS-GEGSRVTTASEENKVCEEIEGVDDWITNFLDDSNFKLD 120


>ref|XP_020253987.1| GATA transcription factor 5-like [Asparagus officinalis]
          Length = 321

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +2

Query: 20  EGCRVTATSDETKICDEINIHE-DWITNFLDDSNFDIDFXXXXXXXXXXXXXXXXSDYVG 196
           EGC VT TS+E +I +E N  E DW+T+F  D  FDID                 +D++ 
Sbjct: 54  EGCGVTPTSEENEINNEANAGEKDWVTSFF-DPQFDIDI---------PATFVPVNDFID 103

Query: 197 NGGADDDSLFRSFSPVSVLDEPNNLSSNDKG 289
           N    D+S+F   SP SVLDEP  +S N +G
Sbjct: 104 N----DESVFGPLSPKSVLDEPIIISLNQEG 130


Top