BLASTX nr result

ID: Ophiopogon27_contig00031555 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00031555
         (424 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020277382.1| protein CHROMATIN REMODELING 35 [Asparagus o...   134   1e-33
ref|XP_020087221.1| protein CHROMATIN REMODELING 35 [Ananas como...    64   3e-09
ref|XP_010917669.1| PREDICTED: protein CHROMATIN REMODELING 35-l...    61   6e-08

>ref|XP_020277382.1| protein CHROMATIN REMODELING 35 [Asparagus officinalis]
 gb|ONK59645.1| uncharacterized protein A4U43_C08F8750 [Asparagus officinalis]
          Length = 928

 Score =  134 bits (337), Expect = 1e-33
 Identities = 77/140 (55%), Positives = 95/140 (67%)
 Frame = +3

Query: 3   CSGSQMLSQAYRVTPSNPSSMYQQSGDVIDLEEPKEPESKTGNDVMTAIVLDSDDEDGNR 182
           C G Q LSQ+Y VT S PS   ++  DVIDLEEP+E + KTG D M+ IV+DSDDEDG++
Sbjct: 62  CLGPQKLSQSYVVTESEPSPGSKEMKDVIDLEEPQESKDKTGADTMSVIVVDSDDEDGSQ 121

Query: 183 HEQNMQPSSSDRLLDFRAWLSSQIEERLKRNRLSAGAANSALQVSDEQAIAIEGKRPPSI 362
             Q  QPS    L DFRAWL+SQ+ ERL++N+    A++S L +S     AIE K+ PSI
Sbjct: 122 QVQK-QPS----LHDFRAWLNSQMAERLRKNKSPLVASDSILPLSCVPGNAIEAKKLPSI 176

Query: 363 QYEKVVLRNVTEKQLALNLE 422
           QYEKVVL N  EK LA  LE
Sbjct: 177 QYEKVVLHNAAEKHLASKLE 196


>ref|XP_020087221.1| protein CHROMATIN REMODELING 35 [Ananas comosus]
 ref|XP_020087222.1| protein CHROMATIN REMODELING 35 [Ananas comosus]
          Length = 964

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
 Frame = +3

Query: 129 NDVMTAIVLDSDDEDGNRHEQNMQP-SSSDRLLDFRAWLSSQIEERLKRNRLSAGAAN-- 299
           ND+ + I++DSD+EDG+R E +  P    +R LDFR+WL   I ER+K+ ++   AAN  
Sbjct: 145 NDIESPIIIDSDEEDGSRQEGSKNPVHPENRTLDFRSWLERSIYERVKQVKMMGQAANDY 204

Query: 300 --SALQVSDEQAIAIEGKRPPSIQYEKVVLRNVTE 398
                 ++     A E    PSIQY+ VVL+ + E
Sbjct: 205 KFDQTNLNLVGQTASEASCEPSIQYQMVVLQKMPE 239


>ref|XP_010917669.1| PREDICTED: protein CHROMATIN REMODELING 35-like isoform X1 [Elaeis
           guineensis]
 ref|XP_010917670.1| PREDICTED: protein CHROMATIN REMODELING 35-like isoform X1 [Elaeis
           guineensis]
          Length = 988

 Score = 60.8 bits (146), Expect = 6e-08
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
 Frame = +3

Query: 111 PESKTGNDVMTAIVLDSDDEDGNRHEQNMQPSSSD-RLLDFRAWLSSQIEERLKRNRLSA 287
           P++K   +  + I++DSDDEDG   +       S+ ++ +F+AWLSS++   L++  L A
Sbjct: 159 PKTKEHKNKTSVIIIDSDDEDGVCRKGTKNSCISECQVHEFQAWLSSELHLCLRQAGLLA 218

Query: 288 GAANSALQVSDEQA-------IAIEGKRPPSIQYEKVVLRNVTEKQLALNLE 422
              +S    + E+         A  GK PPS+QYE VVL  V EKQ   +LE
Sbjct: 219 WDGHSNQPAASERKNVKFAHDFAATGKVPPSVQYEAVVLSKVMEKQPIQDLE 270


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