BLASTX nr result

ID: Ophiopogon27_contig00031416 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00031416
         (406 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273202.1| protein SCAR4 isoform X2 [Asparagus officina...    57   8e-07
ref|XP_020273201.1| protein SCAR4 isoform X1 [Asparagus officina...    57   8e-07

>ref|XP_020273202.1| protein SCAR4 isoform X2 [Asparagus officinalis]
          Length = 1186

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 32/80 (40%), Positives = 45/80 (56%)
 Frame = -2

Query: 240  QQPDSVGTVTDDAFLKXXXXXXXXXXXXXXEWRTNQLQMEHLASHLKMAQSSIGQNLLTA 61
            Q P    ++ D +  +              EWR ++LQM H  SH+K+AQS IGQN  TA
Sbjct: 898  QHPSGSESIIDSSVQETMEELPPMPPLPPLEWRMSKLQMGHPTSHIKIAQSYIGQNQFTA 957

Query: 60   MSTIDERPSHALLTEKGTTV 1
            ++T DE+PS+  LT +G TV
Sbjct: 958  LTT-DEKPSYDSLTARGATV 976


>ref|XP_020273201.1| protein SCAR4 isoform X1 [Asparagus officinalis]
 gb|ONK62638.1| uncharacterized protein A4U43_C07F6270 [Asparagus officinalis]
          Length = 1187

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 32/80 (40%), Positives = 45/80 (56%)
 Frame = -2

Query: 240  QQPDSVGTVTDDAFLKXXXXXXXXXXXXXXEWRTNQLQMEHLASHLKMAQSSIGQNLLTA 61
            Q P    ++ D +  +              EWR ++LQM H  SH+K+AQS IGQN  TA
Sbjct: 899  QHPSGSESIIDSSVQETMEELPPMPPLPPLEWRMSKLQMGHPTSHIKIAQSYIGQNQFTA 958

Query: 60   MSTIDERPSHALLTEKGTTV 1
            ++T DE+PS+  LT +G TV
Sbjct: 959  LTT-DEKPSYDSLTARGATV 977


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