BLASTX nr result
ID: Ophiopogon27_contig00031047
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00031047
(968 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera] 486 e-166
gb|KYP54652.1| Retrovirus-related Pol polyprotein from transposo... 474 e-158
gb|KYP64289.1| Retrovirus-related Pol polyprotein from transposo... 475 e-157
gb|KYP59836.1| Retrovirus-related Pol polyprotein from transposo... 431 e-150
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 462 e-150
emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera] 454 e-148
gb|PPD96412.1| hypothetical protein GOBAR_DD06575 [Gossypium bar... 451 e-145
dbj|GAU11010.1| hypothetical protein TSUD_113030 [Trifolium subt... 429 e-144
dbj|GAU47690.1| hypothetical protein TSUD_245810 [Trifolium subt... 447 e-144
gb|AAX96353.1| retrotransposon protein, putative, Ty1-copia sub-... 424 e-143
dbj|GAU26739.1| hypothetical protein TSUD_317370 [Trifolium subt... 437 e-142
dbj|GAU49932.1| hypothetical protein TSUD_408340 [Trifolium subt... 439 e-142
gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-... 426 e-141
gb|KYP64290.1| Retrovirus-related Pol polyprotein from transposo... 438 e-141
gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subc... 421 e-141
dbj|GAU21337.1| hypothetical protein TSUD_189240 [Trifolium subt... 433 e-140
gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subc... 423 e-140
dbj|GAU50608.1| hypothetical protein TSUD_410180 [Trifolium subt... 428 e-139
gb|ABG66099.1| retrotransposon protein, putative, Ty1-copia subc... 415 e-139
gb|ABA95219.1| retrotransposon protein, putative, Ty1-copia subc... 425 e-139
>emb|CAN64075.1| hypothetical protein VITISV_017997 [Vitis vinifera]
Length = 635
Score = 486 bits (1251), Expect = e-166
Identities = 238/323 (73%), Positives = 275/323 (85%), Gaps = 2/323 (0%)
Frame = +1
Query: 4 IELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTW 183
+ L RSKR K T+ G+ F+TFL+D+DP +YKEA++SPDAPFWKEAINSEIESI+ NHT
Sbjct: 192 LNLVRSKRDXKETNLGDGFYTFLIDEDPKSYKEAITSPDAPFWKEAINSEIESIMYNHTC 251
Query: 184 ELVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIAS 363
ELVDLPPG K IG KWIFKRKLK DGSIEK+KARLVAKG+ Q+K+ DYFDTFAPVTRI S
Sbjct: 252 ELVDLPPGAKTIGFKWIFKRKLKQDGSIEKYKARLVAKGFKQRKNIDYFDTFAPVTRIXS 311
Query: 364 IRVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGL 543
IRVL+ALASIH LVIHQMDVKTAFLNG+LEEEIYMDQP+GCV G E KVCKLVKSLYGL
Sbjct: 312 IRVLLALASIHNLVIHQMDVKTAFLNGDLEEEIYMDQPKGCVVPGKEKKVCKLVKSLYGL 371
Query: 544 KQAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVND 723
KQAPKQWH+KFD VLV+NGY INDADKCIY K++++ V+ICLYVDDMLIFGT+LE+V +
Sbjct: 372 KQAPKQWHNKFDHVLVTNGYSINDADKCIYNKYEDNTCVVICLYVDDMLIFGTNLEVVCE 431
Query: 724 TKSFLSSNFDMKDMG--ETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTP 897
TK FL S FDMK++G E +VILGIKI R + +KLS EHYVE+ L+KF HFDC VST
Sbjct: 432 TKKFLGSKFDMKNLGEVEVEVILGIKIIRTPNELKLSXEHYVEKTLRKFEHFDCKPVSTX 491
Query: 898 YDGSIHLRKNKEHSVSQSEYAQI 966
YD S L+KN+EHSV+Q EYAQI
Sbjct: 492 YDPSSQLKKNREHSVAQIEYAQI 514
>gb|KYP54652.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 900
Score = 474 bits (1220), Expect = e-158
Identities = 228/320 (71%), Positives = 271/320 (84%)
Frame = +1
Query: 7 ELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTWE 186
+LRRSKR RK T FG+DF+T+LV++DP+++ EA+SS DA FWKEAI EI+SI N+TW
Sbjct: 353 DLRRSKRQRKETSFGSDFYTYLVENDPISFSEAISSSDAIFWKEAIRIEIDSIKENNTWT 412
Query: 187 LVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIASI 366
LVDLP G KPIGCKWIFKRK PDGSIEK+KARLVAKG+TQK+D D+FDTFAPV RI+SI
Sbjct: 413 LVDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFTQKQDIDFFDTFAPVARISSI 472
Query: 367 RVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGLK 546
RVLIALASIH+LVIHQMDVKTAFLNGELEEEIYM QPEGC G E+KVC+L+KSLYGLK
Sbjct: 473 RVLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKVCRLLKSLYGLK 532
Query: 547 QAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVNDT 726
QAPKQWH+KFD VL+++G+ + AD+C+YTK ND VIICLYVDDMLIFGT +IV T
Sbjct: 533 QAPKQWHEKFDQVLLNDGFSSSSADRCVYTKSMNDDCVIICLYVDDMLIFGTCDDIVFKT 592
Query: 727 KSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPYDG 906
KSFL+SNFDMKDMGE VILG+K+ R D I LSQ HYVER+LKKF ++DC SV+TPYD
Sbjct: 593 KSFLASNFDMKDMGEASVILGVKVVRKGDSILLSQGHYVERLLKKFDYYDCKSVTTPYDV 652
Query: 907 SIHLRKNKEHSVSQSEYAQI 966
+ L++NK S++QS+YAQI
Sbjct: 653 NSQLKQNKGDSLAQSQYAQI 672
>gb|KYP64289.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1012
Score = 475 bits (1223), Expect = e-157
Identities = 229/320 (71%), Positives = 271/320 (84%)
Frame = +1
Query: 7 ELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTWE 186
+LRRSKR RK T FG+DF+T+LV++DP+++ EA+SS DA FWKEAI EI+SI N+TW
Sbjct: 465 DLRRSKRQRKETSFGSDFYTYLVENDPISFSEAISSSDAIFWKEAIRIEIDSIKENNTWT 524
Query: 187 LVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIASI 366
LVDLP G KPIGCKWIFKRK PDGSIEK+KARLVAKG+TQK+D D+FDTFAPV RI+SI
Sbjct: 525 LVDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFTQKQDIDFFDTFAPVARISSI 584
Query: 367 RVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGLK 546
RVLIALASIH+LVIHQMDVKTAFLNGELEEEIYM QPEGC G E+KVC+L+KSLYGLK
Sbjct: 585 RVLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKVCRLLKSLYGLK 644
Query: 547 QAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVNDT 726
QAPKQWH+KFD VL+++G+ + ADKC+YTK ND VIICLYVDDMLIFGT +IV T
Sbjct: 645 QAPKQWHEKFDQVLLNDGFSSSSADKCVYTKSMNDDCVIICLYVDDMLIFGTCDDIVFKT 704
Query: 727 KSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPYDG 906
KSFL+SNFDMKDMGE VILG+K+ R D I LSQ HYVER+LKKF ++DC SV+TPYD
Sbjct: 705 KSFLASNFDMKDMGEASVILGVKVVRKGDSILLSQGHYVERLLKKFDYYDCKSVTTPYDV 764
Query: 907 SIHLRKNKEHSVSQSEYAQI 966
+ L++NK S++QS+YAQI
Sbjct: 765 NSQLKQNKGDSLAQSQYAQI 784
>gb|KYP59836.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 290
Score = 431 bits (1109), Expect = e-150
Identities = 208/285 (72%), Positives = 243/285 (85%)
Frame = +1
Query: 7 ELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTWE 186
+LRRSKR RK T FG+DF+T+LV++DP+++ EA+SS DA FWKEAI EI+SI N+TW
Sbjct: 4 DLRRSKRQRKETSFGSDFYTYLVENDPISFSEAISSSDAIFWKEAIRIEIDSIKENNTWT 63
Query: 187 LVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIASI 366
LVDLP G KPIGCKWIFKRK PDGSIEK+KARLVAKG+TQK+D D+FDTFAPV RI+SI
Sbjct: 64 LVDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFTQKQDIDFFDTFAPVARISSI 123
Query: 367 RVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGLK 546
RVLIALASIH+LVIHQMDVKTAFLNGELEEEIYM QPEGC G E+KVC+L+KSLYGLK
Sbjct: 124 RVLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKVCRLLKSLYGLK 183
Query: 547 QAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVNDT 726
QAPKQWH+KFD VL+++G+ + AD+C+YTK +D VIICLYVDDMLIFGT +IV T
Sbjct: 184 QAPKQWHEKFDQVLLNDGFSSSSADRCVYTKCMDDDCVIICLYVDDMLIFGTCDDIVFKT 243
Query: 727 KSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKK 861
KSFL+SNFDMKDMGE VILG+K+ R D I LSQ HYVER+LKK
Sbjct: 244 KSFLASNFDMKDMGEASVILGVKVVRKGDSILLSQGHYVERLLKK 288
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 462 bits (1189), Expect = e-150
Identities = 221/320 (69%), Positives = 264/320 (82%)
Frame = +1
Query: 7 ELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTWE 186
++RRSKR RK T FGNDF+T+LV++DP+++ EA S+PDA W +AI +E+ESI N+TW
Sbjct: 743 DVRRSKRQRKETSFGNDFYTYLVENDPISFVEATSAPDAKHWDKAIKTELESIKKNNTWT 802
Query: 187 LVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIASI 366
LVDLP G KPIGCKWIFK+K PDGSIEK+KARLVAKG+TQK + DYFDTFAPVTRI+SI
Sbjct: 803 LVDLPKGAKPIGCKWIFKKKYHPDGSIEKYKARLVAKGFTQKHNIDYFDTFAPVTRISSI 862
Query: 367 RVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGLK 546
RVL+ALASIHKLVIHQMDVKT FLNGELEEEIYM QPEGCV G + KVCKL+KSLYGLK
Sbjct: 863 RVLLALASIHKLVIHQMDVKTTFLNGELEEEIYMTQPEGCVVLGQKEKVCKLLKSLYGLK 922
Query: 547 QAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVNDT 726
QAPKQWH+K D+VL+ G+ NDADKC+Y++ +N VIICLYVDDMLIFGT +IV T
Sbjct: 923 QAPKQWHEKLDNVLLCEGFSTNDADKCVYSRSENGEYVIICLYVDDMLIFGTCNDIVFKT 982
Query: 727 KSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPYDG 906
K FL S F+MKDMGE VILG+KI R D I LSQE Y E++LKKFG++D SVSTPYD
Sbjct: 983 KLFLGSKFEMKDMGEASVILGVKIIRKGDSILLSQEKYTEKLLKKFGYYDFKSVSTPYDA 1042
Query: 907 SIHLRKNKEHSVSQSEYAQI 966
+ L+KN+ S+SQ++YAQI
Sbjct: 1043 NSKLKKNRGESISQTQYAQI 1062
>emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
Length = 1096
Score = 454 bits (1168), Expect = e-148
Identities = 224/322 (69%), Positives = 260/322 (80%)
Frame = +1
Query: 1 EIELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHT 180
E E RSK+ RK T+ G+ F+TFL+DD+P +YKE ++S DA FWKEAINSEIESI+ NHT
Sbjct: 577 EFEPSRSKKDRKETNLGDGFYTFLIDDNPRSYKEVITSLDASFWKEAINSEIESIMCNHT 636
Query: 181 WELVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIA 360
WELV+LPPG K IGCKWIFKRKLK DGSIEK+KARLVAKG+ Q+KD DYFDTFAPVTRIA
Sbjct: 637 WELVNLPPGAKTIGCKWIFKRKLKQDGSIEKYKARLVAKGFKQRKDVDYFDTFAPVTRIA 696
Query: 361 SIRVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYG 540
SIRVLIALASIH LVIHQMDVK AFLNG+LEEEIYMDQPEGCV E VCKLVKS YG
Sbjct: 697 SIRVLIALASIHNLVIHQMDVKIAFLNGDLEEEIYMDQPEGCVVPRKEKNVCKLVKSPYG 756
Query: 541 LKQAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVN 720
L QAPKQWH+KFD + K++++ V+ICLY+DDMLIFGT+LE+V
Sbjct: 757 LTQAPKQWHNKFD-----------------HFKYEDNTCVVICLYIDDMLIFGTNLEVVC 799
Query: 721 DTKSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPY 900
+TK FL S FDMKD+GE +VILGIKITR + +KLSQEHYVE+IL+KF HFDC VSTPY
Sbjct: 800 ETKKFLGSKFDMKDLGEAEVILGIKITRTPNGLKLSQEHYVEKILRKFEHFDCKPVSTPY 859
Query: 901 DGSIHLRKNKEHSVSQSEYAQI 966
D + L+KN+EHSV+Q EYAQI
Sbjct: 860 DPNSQLKKNREHSVAQIEYAQI 881
>gb|PPD96412.1| hypothetical protein GOBAR_DD06575 [Gossypium barbadense]
Length = 1355
Score = 451 bits (1159), Expect = e-145
Identities = 218/337 (64%), Positives = 260/337 (77%), Gaps = 17/337 (5%)
Frame = +1
Query: 7 ELRRSKRARKATDFGNDFFTFLVD-----------------DDPLTYKEAVSSPDAPFWK 135
ELRRSKR +K DFG DF FLV+ DP+T++EAV S D+ FWK
Sbjct: 801 ELRRSKRIKKVKDFGPDFIMFLVEGKGESICNKIPYCYNTESDPITFEEAVKSQDSAFWK 860
Query: 136 EAINSEIESILSNHTWELVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKK 315
EAIN E++SI+ N TW LVDLPPG+KPIGCKWIFK+K+K DG+I+KFKARLVAKG+TQ++
Sbjct: 861 EAINDEMDSIMGNQTWILVDLPPGSKPIGCKWIFKKKMKVDGTIDKFKARLVAKGFTQRQ 920
Query: 316 DFDYFDTFAPVTRIASIRVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVAT 495
DYFDT+APV RIA+IR+LI+L SI+ LV+HQMDVKTAFLNGELEEE+YM+QPEG V
Sbjct: 921 GIDYFDTYAPVARIATIRLLISLTSIYNLVVHQMDVKTAFLNGELEEEVYMEQPEGFVVP 980
Query: 496 GYEHKVCKLVKSLYGLKQAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLY 675
G EHKVCKLVKSLYGLKQAPKQWH KFD V+++NGY+IN++DKCIY+KFDN GVIICLY
Sbjct: 981 GQEHKVCKLVKSLYGLKQAPKQWHQKFDKVVLANGYKINESDKCIYSKFDNGKGVIICLY 1040
Query: 676 VDDMLIFGTSLEIVNDTKSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERIL 855
VDDMLIFGT LE + +TK FLS+NF MKDMG DVILGIKITR I LSQ HY+E +L
Sbjct: 1041 VDDMLIFGTDLEQIENTKKFLSNNFAMKDMGVADVILGIKITRDESTIALSQSHYIENVL 1100
Query: 856 KKFGHFDCTSVSTPYDGSIHLRKNKEHSVSQSEYAQI 966
KKF F+C STP D + L N + Q +YA +
Sbjct: 1101 KKFDLFNCIPASTPMDPQLKLVSNAGRKIDQLKYASL 1137
>dbj|GAU11010.1| hypothetical protein TSUD_113030 [Trifolium subterraneum]
Length = 617
Score = 429 bits (1103), Expect = e-144
Identities = 201/316 (63%), Positives = 254/316 (80%)
Frame = +1
Query: 1 EIELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHT 180
E ELRRSKR R A D+G D+ + +++DP +EA+SS DA W+EAIN E++S+ SN T
Sbjct: 278 ETELRRSKRVRVAKDYGPDYAAYTLNEDPANLQEALSSMDANLWQEAINDEMDSLESNKT 337
Query: 181 WELVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIA 360
W LVDLPPG KPIGCKWI K+KLKPDG++EK+KARL+AKG+ Q+++ D+FDTF+PVTRI
Sbjct: 338 WHLVDLPPGCKPIGCKWILKKKLKPDGTVEKYKARLIAKGFRQRENIDFFDTFSPVTRIT 397
Query: 361 SIRVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYG 540
SIRVLI++A+++ L+++QMDV TAFLNG+LEEEIYM+QPEG V G E KVCKL KSLYG
Sbjct: 398 SIRVLISIAALYNLIVYQMDVNTAFLNGDLEEEIYMEQPEGFVIHGQETKVCKLDKSLYG 457
Query: 541 LKQAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVN 720
LKQAPKQWH+KFD+++VSNG+R+N++DKCIY K D ++ IICLYVDDMLIFG++L VN
Sbjct: 458 LKQAPKQWHEKFDNLMVSNGFRLNESDKCIYYKCDGNICTIICLYVDDMLIFGSNLSAVN 517
Query: 721 DTKSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPY 900
+ KS L +NFDMKD+GE VILGIK TR I L Q HYVE+ILKK+G++DC TPY
Sbjct: 518 NVKSLLGNNFDMKDLGEASVILGIKTTRSEKGISLDQSHYVEKILKKYGYYDCKPAYTPY 577
Query: 901 DGSIHLRKNKEHSVSQ 948
D S+ L KN SV Q
Sbjct: 578 DPSVKLFKNTGDSVRQ 593
>dbj|GAU47690.1| hypothetical protein TSUD_245810 [Trifolium subterraneum]
Length = 1332
Score = 447 bits (1151), Expect = e-144
Identities = 211/322 (65%), Positives = 261/322 (81%)
Frame = +1
Query: 1 EIELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHT 180
E ELRRSKR R A D+G D+ TF +++DP +EA+SS DA W+EAIN E++S+ SN T
Sbjct: 584 ETELRRSKRVRVAKDYGPDYATFTLNEDPANLQEALSSMDADLWQEAINDEMDSLESNKT 643
Query: 181 WELVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIA 360
W LVDLPPG KPIGCKWI K+KLKPDG++EK+KARLVAKG+ Q+++ D+FDTF+PVTRI
Sbjct: 644 WHLVDLPPGCKPIGCKWILKKKLKPDGTVEKYKARLVAKGFRQRENIDFFDTFSPVTRIT 703
Query: 361 SIRVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYG 540
SIRVLI++ +++ L++HQMDVKTAFLNG+LEEEIYM+QPEG V G E KVCKL KSLYG
Sbjct: 704 SIRVLISIPALYNLIVHQMDVKTAFLNGDLEEEIYMEQPEGFVIHGQETKVCKLDKSLYG 763
Query: 541 LKQAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVN 720
LKQAPKQWH+KFD+++VSNG+R+N++DKCIY K D ++ IICLYVDDMLIFG++L VN
Sbjct: 764 LKQAPKQWHEKFDNLMVSNGFRLNESDKCIYYKCDGNICTIICLYVDDMLIFGSNLSAVN 823
Query: 721 DTKSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPY 900
+ KS L +NFDMKD+GE VILGIKITR I L Q HYVE+ILKK+G+FDC TPY
Sbjct: 824 NVKSLLGNNFDMKDLGEASVILGIKITRSEKGISLDQSHYVEKILKKYGYFDCKPACTPY 883
Query: 901 DGSIHLRKNKEHSVSQSEYAQI 966
D S+ L KN SV Q+EYA I
Sbjct: 884 DPSVKLFKNTSDSVRQTEYASI 905
>gb|AAX96353.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91827.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 527
Score = 424 bits (1090), Expect = e-143
Identities = 198/318 (62%), Positives = 252/318 (79%)
Frame = +1
Query: 13 RRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTWELV 192
RRSKR R A FG+DF +LVDD P + EA +SPDA +WKEA+ SE++SI++N TWE+
Sbjct: 62 RRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVT 121
Query: 193 DLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIASIRV 372
+ P G KP+GCKW+FK+KL+PDG+IEK+KARLVAKGYTQK+ D+FDT++PV R+ +IRV
Sbjct: 122 ERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRV 181
Query: 373 LIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGLKQA 552
L++LA+ H L++HQMDVKT FLNGEL+EEIYMDQP+G V G E KVCKL+KSLYGLKQA
Sbjct: 182 LLSLAASHGLLVHQMDVKTTFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 241
Query: 553 PKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVNDTKS 732
PKQWH+KFD L S G+ +N+ADKC+Y + GVI+CLYVDD+LIFGT+LE++N+ KS
Sbjct: 242 PKQWHEKFDITLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 301
Query: 733 FLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPYDGSI 912
FLS NFDMKD+G DVIL IK+ R + I L Q HYVE+IL +FG+ D TPYD S+
Sbjct: 302 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 361
Query: 913 HLRKNKEHSVSQSEYAQI 966
LRKNK + +Q EY+QI
Sbjct: 362 LLRKNKRIARNQLEYSQI 379
>dbj|GAU26739.1| hypothetical protein TSUD_317370 [Trifolium subterraneum]
Length = 1031
Score = 437 bits (1124), Expect = e-142
Identities = 206/322 (63%), Positives = 258/322 (80%)
Frame = +1
Query: 1 EIELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHT 180
E ELRRSKR R A D+G D+ + +++DP +EA+SS DA W+EAIN E++S+ SN T
Sbjct: 531 ETELRRSKRVRVAKDYGPDYAAYTLNEDPANLQEALSSMDADLWQEAINDEMDSLESNKT 590
Query: 181 WELVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIA 360
W LV+LPPG KPIGCKWI K+KLKPDG++EK+KARLVAK + Q+++ D+FDTF+PVTRI
Sbjct: 591 WHLVELPPGCKPIGCKWILKKKLKPDGTVEKYKARLVAKCFRQRENIDFFDTFSPVTRIT 650
Query: 361 SIRVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYG 540
SIRVLI++A+++ L++HQMDVKTAFLNG+LEEEIYM+QPEG V G E KVCKL KSLYG
Sbjct: 651 SIRVLISIAALYNLIVHQMDVKTAFLNGDLEEEIYMEQPEGFVIHGQETKVCKLDKSLYG 710
Query: 541 LKQAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVN 720
LK APKQWH+KFD+++VSNG+R+N++DKCIY K D ++ IICLYVDDMLIFG++L VN
Sbjct: 711 LKHAPKQWHEKFDNLMVSNGFRLNESDKCIYYKCDGNICTIICLYVDDMLIFGSNLSAVN 770
Query: 721 DTKSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPY 900
+ KS L +NFDMKD+GE VILGIK TR I L Q HYVE+ILKK+G+FDC TPY
Sbjct: 771 NVKSLLGNNFDMKDLGEASVILGIKFTRSEKGISLDQSHYVEKILKKYGYFDCKPACTPY 830
Query: 901 DGSIHLRKNKEHSVSQSEYAQI 966
D S+ L KN SV Q+EYA I
Sbjct: 831 DPSVKLFKNTGDSVRQTEYASI 852
>dbj|GAU49932.1| hypothetical protein TSUD_408340 [Trifolium subterraneum]
Length = 1164
Score = 439 bits (1130), Expect = e-142
Identities = 206/322 (63%), Positives = 258/322 (80%)
Frame = +1
Query: 1 EIELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHT 180
E ELRRSKR R A D+G D+ + +++DP +EA+SS DA W+EAIN E++S+ SN T
Sbjct: 585 ETELRRSKRVRVAKDYGPDYAAYTLNEDPANLQEALSSKDADLWQEAINDEMDSLESNKT 644
Query: 181 WELVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIA 360
W LVD PPG KPIGCKWI K+KLKPDG++EK+KARL+AKG+ Q+++ D+FDTF+PVTRI
Sbjct: 645 WHLVDFPPGCKPIGCKWILKKKLKPDGTVEKYKARLLAKGFRQRENIDFFDTFSPVTRIT 704
Query: 361 SIRVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYG 540
SIRV I++A+++ L++HQMDVKTAFLNG+LEEEIYM+QPEG V G E KVCKL KSLYG
Sbjct: 705 SIRVFISIATLYNLIVHQMDVKTAFLNGDLEEEIYMEQPEGFVIHGQETKVCKLDKSLYG 764
Query: 541 LKQAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVN 720
LKQAPKQWH+KFD+++VSNG+R+N++D CIY K D ++ IICLYVDDMLIFG++L VN
Sbjct: 765 LKQAPKQWHEKFDNLMVSNGFRLNESDNCIYYKCDGNICTIICLYVDDMLIFGSNLSAVN 824
Query: 721 DTKSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPY 900
+ KS L +NFDMKD+GE VILGIKITR I L Q HYVE+ILKK+G+FDC TPY
Sbjct: 825 NVKSLLGNNFDMKDLGEASVILGIKITRSEKWISLDQSHYVEKILKKYGYFDCKPACTPY 884
Query: 901 DGSIHLRKNKEHSVSQSEYAQI 966
D S+ L KN SV Q+EYA I
Sbjct: 885 DPSVKLFKNIGDSVRQTEYASI 906
>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 713
Score = 426 bits (1094), Expect = e-141
Identities = 199/318 (62%), Positives = 253/318 (79%)
Frame = +1
Query: 13 RRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTWELV 192
RRSKR R A FG+DF +LVDD P + EA +SPDA +WKEA+ SE++SI++N TWE+
Sbjct: 160 RRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVT 219
Query: 193 DLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIASIRV 372
+ P G KP+GCKW+FK+KL+PDG+IEK+KARLVAKGYTQK+ D+FDT++PV R+ +IRV
Sbjct: 220 ERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRV 279
Query: 373 LIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGLKQA 552
L++LA+ H L++HQMDVKTAFLNGEL+EEIYMDQP+G V G E KVCKL+KSLYGLKQA
Sbjct: 280 LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 339
Query: 553 PKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVNDTKS 732
PKQWH+KFD L S G+ +N+ADKC+Y + GVI+CLYVDD+LIFGT+LE++N+ KS
Sbjct: 340 PKQWHEKFDKTLTSAGFVVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 399
Query: 733 FLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPYDGSI 912
FLS NFDMKD+G DVIL IK+ R + I L Q HYVE+IL +FG+ D TPYD S+
Sbjct: 400 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 459
Query: 913 HLRKNKEHSVSQSEYAQI 966
LRKNK + +Q EY+QI
Sbjct: 460 LLRKNKRIARNQLEYSQI 477
>gb|KYP64290.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1215
Score = 438 bits (1127), Expect = e-141
Identities = 215/320 (67%), Positives = 257/320 (80%)
Frame = +1
Query: 7 ELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTWE 186
+LRRSKR RK T FG+DF+T+LV++DP+++ EA+SS DA FWKEAI EI+SI N+TW
Sbjct: 690 DLRRSKRQRKETSFGSDFYTYLVENDPISFSEAISSSDAIFWKEAIRIEIDSIKENNTWT 749
Query: 187 LVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIASI 366
LVDLP G KPIGCKWIFKRK PDGSIEK+KARLVAKG+TQK+D D+FDTFAPV RI+SI
Sbjct: 750 LVDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFTQKQDIDFFDTFAPVARISSI 809
Query: 367 RVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGLK 546
RVLIALASIH+LVIHQMDVKTAFLNGELEEEIYM QPEGC G E+KVC+L+KSLYGLK
Sbjct: 810 RVLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKVCRLLKSLYGLK 869
Query: 547 QAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVNDT 726
QAPKQWH+KFD VL+++G+ + AD+C+YTK +D VIICLYVDDMLIFGT +IV T
Sbjct: 870 QAPKQWHEKFDQVLLNDGFSSSSADRCVYTKCMDDDCVIICLYVDDMLIFGTCDDIVFKT 929
Query: 727 KSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPYDG 906
KSFL+SNFDMKDMG HYVER+LKKF ++DC SV+TPYD
Sbjct: 930 KSFLASNFDMKDMG----------------------HYVERLLKKFDYYDCKSVTTPYDV 967
Query: 907 SIHLRKNKEHSVSQSEYAQI 966
+ L++NK S++QS+YAQI
Sbjct: 968 NSQLKQNKGDSLAQSQYAQI 987
>gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 622
Score = 421 bits (1082), Expect = e-141
Identities = 198/318 (62%), Positives = 252/318 (79%)
Frame = +1
Query: 13 RRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTWELV 192
RRSKR R A FG+DF +LVDD P + EA +SPDA +WKEA+ SE++SI++N TWE+
Sbjct: 62 RRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVT 121
Query: 193 DLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIASIRV 372
+ P G KP+GCKW+FK+KL+PDG+IEK+KARLVAKGYTQK+ D+FDT++PV R+ +IRV
Sbjct: 122 ERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRV 181
Query: 373 LIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGLKQA 552
L++LA+ H L++HQMDVKTAFLN EL+EEIYMDQP+G V G E KVCKL+KSLYGLKQA
Sbjct: 182 LLSLAASHGLLVHQMDVKTAFLNRELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 241
Query: 553 PKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVNDTKS 732
PKQ H+KFD L S G+ +N+ADKC+Y + D GVI+CLYVDD+LIFGT+LE++N+ KS
Sbjct: 242 PKQCHEKFDKTLTSAGFAVNEADKCVYYRHGGDEGVILCLYVDDILIFGTNLEVINEAKS 301
Query: 733 FLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPYDGSI 912
FLS NFDMKD+G DVIL IK+ R + I L Q HYVE+IL +FG+ D TPYD S+
Sbjct: 302 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 361
Query: 913 HLRKNKEHSVSQSEYAQI 966
LRKNK + +Q EY+QI
Sbjct: 362 LLRKNKRIARNQLEYSQI 379
>dbj|GAU21337.1| hypothetical protein TSUD_189240 [Trifolium subterraneum]
Length = 1052
Score = 433 bits (1113), Expect = e-140
Identities = 205/322 (63%), Positives = 257/322 (79%)
Frame = +1
Query: 1 EIELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHT 180
E ELRRSK R D+G D+ + +++DP +EA+SS DA W+EAIN E++S+ SN T
Sbjct: 511 ETELRRSKCVRVVKDYGPDYAAYTLNEDPANLQEALSSMDADLWQEAINDEMDSLESNKT 570
Query: 181 WELVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIA 360
W LVDLPPG KPIGCKWI K+KLKPDG++EK+KARLVAKG+ Q+++ D+FDTF+PVTRI
Sbjct: 571 WHLVDLPPGCKPIGCKWILKKKLKPDGTVEKYKARLVAKGFRQRENIDFFDTFSPVTRIT 630
Query: 361 SIRVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYG 540
SIRVLI++A+++ L++HQMDVKTAFLNG+LEEEIYM+QPEG V G E KVCKL KSLYG
Sbjct: 631 SIRVLISIAALYNLIVHQMDVKTAFLNGDLEEEIYMEQPEGFVIHGQETKVCKLDKSLYG 690
Query: 541 LKQAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVN 720
LKQAPKQWH+KFD+++VSNG+R+N++DKCIY K D ++ IICLYVDDMLIFG++L VN
Sbjct: 691 LKQAPKQWHEKFDNLMVSNGFRLNESDKCIYYKCDGNICTIICLYVDDMLIFGSNLSAVN 750
Query: 721 DTKSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPY 900
+ KS L +NFDMKD+GE VILGIKITR I Q HYVE+ILKK+G++D TPY
Sbjct: 751 NVKSLLGNNFDMKDLGEASVILGIKITRSEKGISPDQSHYVEKILKKYGYYDYKPACTPY 810
Query: 901 DGSIHLRKNKEHSVSQSEYAQI 966
D S+ L KN SV Q+EYA I
Sbjct: 811 DPSVKLFKNTGDSVRQTEYASI 832
>gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 764
Score = 423 bits (1087), Expect = e-140
Identities = 198/318 (62%), Positives = 252/318 (79%)
Frame = +1
Query: 13 RRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTWELV 192
RRSKR R A FG+DF +LVDD P + EA +S DA +WKEA+ SE++SI++N TWE+
Sbjct: 191 RRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASRDADYWKEAVRSEMDSIIANGTWEVT 250
Query: 193 DLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIASIRV 372
+ P G KP+GCKW+FK+KL+PDG+IEK+KARLVAKGYTQK+ D+FDT++PV R+ +IRV
Sbjct: 251 ERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRV 310
Query: 373 LIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGLKQA 552
L++LA+ H L++HQMDVKTAFLNGEL+EEIYMDQP+G V G E KVCKL+KSLYGLKQA
Sbjct: 311 LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 370
Query: 553 PKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVNDTKS 732
PKQWH+KFD L S G+ +N+ADKC+Y + GVI+CLYVDD+LIFGT+LE++N+ KS
Sbjct: 371 PKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 430
Query: 733 FLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPYDGSI 912
FLS NFDMKD+G DVIL IK+ R + I L Q HYVE+IL +FG+ D TPYD S+
Sbjct: 431 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 490
Query: 913 HLRKNKEHSVSQSEYAQI 966
LRKNK + +Q EY+QI
Sbjct: 491 LLRKNKRIARNQLEYSQI 508
>dbj|GAU50608.1| hypothetical protein TSUD_410180 [Trifolium subterraneum]
Length = 966
Score = 428 bits (1100), Expect = e-139
Identities = 201/322 (62%), Positives = 256/322 (79%)
Frame = +1
Query: 1 EIELRRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHT 180
E ELRRSK R A D+G D+ + +++DP +EA+SS DA W+EAIN E++S+ SN T
Sbjct: 536 ETELRRSKHVRVAKDYGPDYAAYTLNEDPANLQEALSSMDADLWQEAINDEMDSLESNKT 595
Query: 181 WELVDLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIA 360
W LVDL PG KPIGCKWI K+KLKPDG++EK+KARLVAKG+ Q+++ D+FDTF+PVTRI
Sbjct: 596 WHLVDLSPGCKPIGCKWILKKKLKPDGTVEKYKARLVAKGFRQRENIDFFDTFSPVTRIT 655
Query: 361 SIRVLIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYG 540
SIR+LI++A+++ L++HQMDVK AFLNG+LEEEIYM+QPEG V G E KVCKL K LYG
Sbjct: 656 SIRILISIAALYNLIVHQMDVKIAFLNGDLEEEIYMEQPEGFVIHGQETKVCKLDKYLYG 715
Query: 541 LKQAPKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVN 720
LKQAPKQWH+KFD+++VSNG+R+N++DK IY K D ++ IICLY+DDMLIFG++L VN
Sbjct: 716 LKQAPKQWHEKFDNLMVSNGFRLNESDKFIYYKCDGNICTIICLYIDDMLIFGSNLSAVN 775
Query: 721 DTKSFLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPY 900
+ KS L ++FDMKD+GE VILGIKITR I L Q HYVE+ILKK+G+FDC TPY
Sbjct: 776 NVKSLLGNDFDMKDLGEASVILGIKITRSEKGISLDQSHYVEKILKKYGYFDCKPTCTPY 835
Query: 901 DGSIHLRKNKEHSVSQSEYAQI 966
D ++ L KN SV Q+EYA I
Sbjct: 836 DPNVKLFKNTGDSVRQTEYASI 857
>gb|ABG66099.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 591
Score = 415 bits (1067), Expect = e-139
Identities = 193/318 (60%), Positives = 249/318 (78%)
Frame = +1
Query: 13 RRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTWELV 192
RRSKR R A FG+DF +LVDD P + EA +SPDA +WK+A+ SE++SI++N TWE+
Sbjct: 56 RRSKRQRMAKSFGDDFIVYLVDDTPKSISEAYASPDADYWKKAVRSEMDSIITNGTWEVT 115
Query: 193 DLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIASIRV 372
+ P G KP+GCKW+FK+KL+PDG+IEK+KARLVAKGYTQK+ D+FDT++PV R+ +IRV
Sbjct: 116 ERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRV 175
Query: 373 LIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGLKQA 552
L++LA+ H L++HQMDVKTAFLNGEL+E+IYMDQP+ V G E KVCKL+KSLYGLKQA
Sbjct: 176 LLSLAASHGLLVHQMDVKTAFLNGELDEKIYMDQPDAFVVEGQEGKVCKLLKSLYGLKQA 235
Query: 553 PKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVNDTKS 732
PKQWH+KFD L S G+ +N+ DKC+Y ++ GVI CLYVDD+LIFGT+L ++N+ KS
Sbjct: 236 PKQWHEKFDKTLTSAGFAVNEVDKCVYYRYGGGEGVIPCLYVDDILIFGTNLRVINEVKS 295
Query: 733 FLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPYDGSI 912
FLS NFDMKD+G DVIL IK+ R + I Q HYVE+IL +FG+ D TPYD S+
Sbjct: 296 FLSQNFDMKDLGVADVILNIKLIRGENGITHLQSHYVEKILNRFGYIDSKPSPTPYDPSL 355
Query: 913 HLRKNKEHSVSQSEYAQI 966
LRKNK + +Q EY+QI
Sbjct: 356 LLRKNKRIARNQLEYSQI 373
>gb|ABA95219.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 909
Score = 425 bits (1092), Expect = e-139
Identities = 198/318 (62%), Positives = 253/318 (79%)
Frame = +1
Query: 13 RRSKRARKATDFGNDFFTFLVDDDPLTYKEAVSSPDAPFWKEAINSEIESILSNHTWELV 192
RRSKR R A FG+DF +LVDD P + EA +SPDA +WKEA+ SE++SI++N TWE+
Sbjct: 446 RRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVT 505
Query: 193 DLPPGTKPIGCKWIFKRKLKPDGSIEKFKARLVAKGYTQKKDFDYFDTFAPVTRIASIRV 372
+ P G +P+GCKW+FK+KL+PDG+IEK+KARLVAKGYTQK+ D+FDT++PV R+ +IRV
Sbjct: 506 ERPYGCEPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRV 565
Query: 373 LIALASIHKLVIHQMDVKTAFLNGELEEEIYMDQPEGCVATGYEHKVCKLVKSLYGLKQA 552
L++LA+ H L++HQMDVKTAFLNGEL+EEIYMDQP+G V G E KVCKL+KSLYGLKQA
Sbjct: 566 LLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQA 625
Query: 553 PKQWHDKFDSVLVSNGYRINDADKCIYTKFDNDVGVIICLYVDDMLIFGTSLEIVNDTKS 732
PKQWH+KFD L S G+ +N+ADKC+Y + GVI+CLYVDD+LIFGT+LE++N+ KS
Sbjct: 626 PKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKS 685
Query: 733 FLSSNFDMKDMGETDVILGIKITRYSDCIKLSQEHYVERILKKFGHFDCTSVSTPYDGSI 912
FLS NFDMKD+G DVIL IK+ R + I L Q HYVE+IL +FG+ D TPYD S+
Sbjct: 686 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 745
Query: 913 HLRKNKEHSVSQSEYAQI 966
LRKNK + +Q EY+QI
Sbjct: 746 LLRKNKRIARNQLEYSQI 763