BLASTX nr result

ID: Ophiopogon27_contig00030560 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00030560
         (397 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD10293.1| F-box protein family-like protein [Oryza sativa ...    60   7e-08
ref|XP_015648310.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    60   7e-08
gb|PAN12663.1| hypothetical protein PAHAL_B02992 [Panicum hallii]      58   5e-07
gb|EAZ07245.1| hypothetical protein OsI_29491 [Oryza sativa Indi...    57   1e-06
dbj|BAD09966.1| F-box protein family-like protein [Oryza sativa ...    57   1e-06
ref|XP_015650596.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    57   1e-06

>dbj|BAD10293.1| F-box protein family-like protein [Oryza sativa Japonica Group]
 dbj|BAD09969.1| F-box protein family-like protein [Oryza sativa Japonica Group]
 dbj|BAF23895.1| Os08g0461300 [Oryza sativa Japonica Group]
 dbj|BAG89604.1| unnamed protein product [Oryza sativa Japonica Group]
 dbj|BAT05769.1| Os08g0461300 [Oryza sativa Japonica Group]
          Length = 432

 Score = 60.1 bits (144), Expect = 7e-08
 Identities = 44/122 (36%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
 Frame = -3

Query: 395 WRRRWHSISSLDLC---GLPSNIISQLLLHHSSPVRVF-LARPENMKEPCPIYCWLSTLS 228
           WRRRW S+ ++DL    G+ ++ +  LLL  ++P R F LA  +    P   + WL  LS
Sbjct: 57  WRRRWESLPTVDLTRSPGISASDVDALLLRRTAPARSFRLATRDRSWSPTAFHDWLLRLS 116

Query: 227 H-RSASTLRTLKLRF---YQPLSINSVARNFPNLTHLHL-SCKLSISPDCFFGIPNLRTL 63
                  LR L+L     Y    +NS   +F  LT L L  C L   P  F G PNL+T+
Sbjct: 117 RGGGGGGLRDLELTLRYTYINSKLNSCLFSFRELTSLRLHCCGLPHVPTEFAGFPNLKTM 176

Query: 62  YV 57
           Y+
Sbjct: 177 YL 178


>ref|XP_015648310.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570 [Oryza sativa
           Japonica Group]
 gb|EAZ42996.1| hypothetical protein OsJ_27583 [Oryza sativa Japonica Group]
          Length = 613

 Score = 60.1 bits (144), Expect = 7e-08
 Identities = 44/122 (36%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
 Frame = -3

Query: 395 WRRRWHSISSLDLC---GLPSNIISQLLLHHSSPVRVF-LARPENMKEPCPIYCWLSTLS 228
           WRRRW S+ ++DL    G+ ++ +  LLL  ++P R F LA  +    P   + WL  LS
Sbjct: 57  WRRRWESLPTVDLTRSPGISASDVDALLLRRTAPARSFRLATRDRSWSPTAFHDWLLRLS 116

Query: 227 H-RSASTLRTLKLRF---YQPLSINSVARNFPNLTHLHL-SCKLSISPDCFFGIPNLRTL 63
                  LR L+L     Y    +NS   +F  LT L L  C L   P  F G PNL+T+
Sbjct: 117 RGGGGGGLRDLELTLRYTYINSKLNSCLFSFRELTSLRLHCCGLPHVPTEFAGFPNLKTM 176

Query: 62  YV 57
           Y+
Sbjct: 177 YL 178


>gb|PAN12663.1| hypothetical protein PAHAL_B02992 [Panicum hallii]
          Length = 497

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
 Frame = -3

Query: 395 WRRRWHSISSLDLCGLPS-----NIISQLLLHHSSPVRVFLARPENMKEPCPIYCWLSTL 231
           WRRRW S+ +L L  L         +  +L+ ++  +R    R  N    C I  WL  L
Sbjct: 47  WRRRWESLPTLSLSLLDGLSTLPTTVDSVLIRYAGRIRDVSIRINNAYSVCRIDDWLIAL 106

Query: 230 SHRSASTLRTLKLRFYQPLSINSVARNFPNLTHLHL-SCKLSISPDCFFGIPNLRTLYVG 54
           S R    +R++ LR    LSINS   +F NL  L L  C +  +P  F G P L+ L + 
Sbjct: 107 SRRG---VRSMDLRVDCGLSINSSIYSFSNLVTLKLHGCYVPSTPVGFAGFPVLQELKIA 163

Query: 53  DILY 42
           D+ +
Sbjct: 164 DVQF 167


>gb|EAZ07245.1| hypothetical protein OsI_29491 [Oryza sativa Indica Group]
          Length = 551

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
 Frame = -3

Query: 395 WRRRWHSISSLDLC---GLPSNIISQLLLHHSSPVRVF-LARPENMKEPCPIYCWLSTLS 228
           WRRRW S+ ++ L    G+ ++ +  LLL  ++PVR F LA  +    P   + WL  L 
Sbjct: 34  WRRRWESLPTVGLLNSPGIGASDVDALLLRRTAPVRSFRLATRDRSWSPTAFHDWLLHLH 93

Query: 227 HRSASTLRTLKLRF-YQPLSINSVARNFPNLTHLHL-SCKLSISPDCFFGIPNLRTLY 60
            R       L LR+ +    +NS   +F  LT L L  C L   P  F G PNL+TL+
Sbjct: 94  LRGGLRDLELTLRYEFMYQKLNSCLFSFRELTSLKLYCCGLPNLPAEFAGFPNLKTLH 151


>dbj|BAD09966.1| F-box protein family-like protein [Oryza sativa Japonica Group]
 dbj|BAF23893.1| Os08g0460900 [Oryza sativa Japonica Group]
          Length = 584

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
 Frame = -3

Query: 395 WRRRWHSISSLDLC---GLPSNIISQLLLHHSSPVRVF-LARPENMKEPCPIYCWLSTLS 228
           WRRRW S+ ++ L    G+ ++ +  LLL  ++PVR F LA  +    P   + WL  L 
Sbjct: 34  WRRRWESLPTVGLLNSPGIGASDVDALLLRRTAPVRSFRLATRDRSWSPTAFHDWLLHLH 93

Query: 227 HRSASTLRTLKLRF-YQPLSINSVARNFPNLTHLHL-SCKLSISPDCFFGIPNLRTLY 60
            R       L LR+ +    +NS   +F  LT L L  C L   P  F G PNL+TL+
Sbjct: 94  LRGGLRDLELTLRYEFMYQKLNSCLFSFRELTSLKLYCCGLPNLPAEFAGFPNLKTLH 151


>ref|XP_015650596.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570 [Oryza sativa
           Japonica Group]
          Length = 605

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
 Frame = -3

Query: 395 WRRRWHSISSLDLC---GLPSNIISQLLLHHSSPVRVF-LARPENMKEPCPIYCWLSTLS 228
           WRRRW S+ ++ L    G+ ++ +  LLL  ++PVR F LA  +    P   + WL  L 
Sbjct: 55  WRRRWESLPTVGLLNSPGIGASDVDALLLRRTAPVRSFRLATRDRSWSPTAFHDWLLHLH 114

Query: 227 HRSASTLRTLKLRF-YQPLSINSVARNFPNLTHLHL-SCKLSISPDCFFGIPNLRTLY 60
            R       L LR+ +    +NS   +F  LT L L  C L   P  F G PNL+TL+
Sbjct: 115 LRGGLRDLELTLRYEFMYQKLNSCLFSFRELTSLKLYCCGLPNLPAEFAGFPNLKTLH 172


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