BLASTX nr result
ID: Ophiopogon27_contig00030384
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00030384
(432 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020251824.1| pentatricopeptide repeat-containing protein ... 109 7e-25
ref|XP_010933859.1| PREDICTED: pentatricopeptide repeat-containi... 75 5e-13
ref|XP_008810585.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 69 7e-11
ref|XP_009413303.1| PREDICTED: pentatricopeptide repeat-containi... 61 5e-08
gb|OVA12023.1| Smr protein/MutS2 C-terminal [Macleaya cordata] 61 6e-08
ref|XP_023734251.1| pentatricopeptide repeat-containing protein ... 58 7e-07
ref|XP_020548243.1| LOW QUALITY PROTEIN: pentatricopeptide repea... 57 2e-06
>ref|XP_020251824.1| pentatricopeptide repeat-containing protein At1g74750-like
[Asparagus officinalis]
ref|XP_020251825.1| pentatricopeptide repeat-containing protein At1g74750-like
[Asparagus officinalis]
ref|XP_020251826.1| pentatricopeptide repeat-containing protein At1g74750-like
[Asparagus officinalis]
gb|ONK81463.1| uncharacterized protein A4U43_C01F29350 [Asparagus officinalis]
Length = 854
Score = 109 bits (272), Expect = 7e-25
Identities = 65/127 (51%), Positives = 79/127 (62%)
Frame = +1
Query: 1 LKDPFGSVSPLSPQSRAYAVSAPHXXXXXXXXXXXXXXXNANTDDVQAHQSGLLNPSGMT 180
LKD FG V+ LSPQ+RA S P N++ D ++A QS +N S M
Sbjct: 64 LKDAFGPVNYLSPQNRAVVGSGPQNRAVVGSGPHVKI--NSDGDTIEAPQSCAIN-SSMA 120
Query: 181 AQNFVKAGIATVGMLSELINYRIPATDGHGQLANPNCVVSTGSPSPIPNTRSANGKSRNH 360
QNFVKAG+ATVGMLSELINYRIP D H + + V +P P+ NTRS NGKSRN+
Sbjct: 121 TQNFVKAGVATVGMLSELINYRIPRADDHDDHLSTSNYVINNTP-PVSNTRSNNGKSRNN 179
Query: 361 AKYSRVQ 381
AKYS+VQ
Sbjct: 180 AKYSKVQ 186
>ref|XP_010933859.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
isoform X1 [Elaeis guineensis]
ref|XP_010933868.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
isoform X2 [Elaeis guineensis]
Length = 874
Score = 75.5 bits (184), Expect = 5e-13
Identities = 48/125 (38%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Frame = +1
Query: 19 SVSPLSPQSRAYAVSAPHXXXXXXXXXXXXXXXNA--NTDDVQAHQSG--LLNPSGMTAQ 186
++ + S Y SAPH N N + H SG LL+ S +TA+
Sbjct: 73 AIGSIGHHSSGYTASAPHVISSTSSLKSSSSYVNRKINCANESGHASGNDLLHSSKLTAE 132
Query: 187 NFVKAGIATVGMLSELINYRIPATDGHGQLANPNCVVSTGSPSPIPNTRSANGKSRNHAK 366
+VKAGIA+VGM SEL+NYRIPA + H A N VV S P ++S+N K RN A
Sbjct: 133 RYVKAGIASVGMFSELVNYRIPAANQHVLFAPQNGVVD--STQPFTTSKSSNSKPRNRAN 190
Query: 367 YSRVQ 381
R +
Sbjct: 191 NPRTE 195
>ref|XP_008810585.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g74750-like [Phoenix dactylifera]
Length = 874
Score = 69.3 bits (168), Expect = 7e-11
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Frame = +1
Query: 19 SVSPLSPQSRAYAVSAPHXXXXXXXXXXXXXXXNA--NTDDVQAHQSG--LLNPSGMTAQ 186
++ + + Y SAPH N N D H SG LL+ S +TA+
Sbjct: 73 AIGSIGHHNSGYTASAPHVISSTSSLKSNSSYVNRKINCADESGHASGNDLLHSSKLTAE 132
Query: 187 NFVKAGIATVGMLSELINYRIPATDGHGQLANPNCVVSTGSPSPIPNTRSANGKSRNHAK 366
+FVKAGIA+VG SEL+NYRI A + H A P+ +V S P ++ +N K RN A
Sbjct: 133 HFVKAGIASVGTFSELVNYRIQAANQHVLFAPPDGMVD--STQPFTASKFSNSKPRNRAN 190
Query: 367 YSRVQ 381
R +
Sbjct: 191 NPRTE 195
>ref|XP_009413303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18900
[Musa acuminata subsp. malaccensis]
ref|XP_009413304.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18900
[Musa acuminata subsp. malaccensis]
Length = 866
Score = 61.2 bits (147), Expect = 5e-08
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Frame = +1
Query: 118 NANTDD----VQAHQSGLLNPSGMTAQNFVKAGIATVGMLSELINYRIPATDGHGQLANP 285
N NTD+ V+A + +LN S +TA FVKAG+ATV M SEL++++ P T+ Q
Sbjct: 103 NRNTDNMNAGVRASGTDMLNSSKLTAGRFVKAGMATVSMFSELVSHKTPGTEPGPQ---- 158
Query: 286 NCVVSTGSPSPIPNTRSANGKSRNHAKYSRVQ 381
C+ + PS NT S+N KS N YS+ Q
Sbjct: 159 RCMADSTQPS--FNTISSNDKSHNKPNYSKRQ 188
>gb|OVA12023.1| Smr protein/MutS2 C-terminal [Macleaya cordata]
Length = 884
Score = 60.8 bits (146), Expect = 6e-08
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = +1
Query: 7 DPFGSVSPLSPQSRAYAVSAPHXXXXXXXXXXXXXXXNANTDDVQAHQSGLLNPSGMTAQ 186
D G++ ++ AY SA H + DDV A + ++ S + +
Sbjct: 75 DAGGAIGYQKAENGAYPTSAAHVLSAPSSSLISGGVSSVG-DDVYATKKDGVHSSALVSD 133
Query: 187 NFVKAGIATVGMLSELINYRIPATDGHGQL-ANPNCVVSTGSPSPIPNTRSANGKSRNHA 363
+ VKAGIA V +LS+L+NY+IP +DG L ++PN VV T S I + RS+N K +
Sbjct: 134 HLVKAGIAAVNVLSDLVNYKIPFSDGKDILHSSPNSVVDT--TSSISSIRSSNIKPQKRE 191
Query: 364 KYSRV 378
+S V
Sbjct: 192 NFSMV 196
>ref|XP_023734251.1| pentatricopeptide repeat-containing protein At1g18900-like [Lactuca
sativa]
gb|PLY73469.1| hypothetical protein LSAT_4X106880 [Lactuca sativa]
Length = 796
Score = 57.8 bits (138), Expect = 7e-07
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Frame = +1
Query: 160 LNPSGMTAQNFVKAGIATVGMLSELINYRIPATDGHGQLANPNCVVSTGSPSP------- 318
+ PSG+T +FV+AGIA V L++++NY+IP T+G Q N VV G P P
Sbjct: 96 IQPSGLTTGHFVRAGIAAVNFLNDVVNYKIPMTEGSSQ----NYVVDHGRPIPNVKPYKK 151
Query: 319 -IPNTRSANGKSRNHAKYSRVQ 381
IP +++ KS N Y +++
Sbjct: 152 VIPEKTTSSDKSSNVKVYKKIE 173
>ref|XP_020548243.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
At1g74750-like [Sesamum indicum]
Length = 856
Score = 56.6 bits (135), Expect = 2e-06
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +1
Query: 130 DDVQAHQSGLLNPSGMTAQNFVKAGIATVGMLSELINYRIPATDGHGQLAN-PNCVVSTG 306
DD A +++ S A FVKAG+A VG+LS+L+NYRIP TDG + + N +V
Sbjct: 108 DDFDAKD--IVHSSPPIADQFVKAGMAAVGLLSDLVNYRIPMTDGSAMVTSLQNSMVD-- 163
Query: 307 SPSPIPNTRSANGK-SRNHAKYSR 375
PI N RSAN K SR Y +
Sbjct: 164 PTKPISNVRSANMKTSRKDKNYDK 187