BLASTX nr result
ID: Ophiopogon27_contig00030338
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00030338
(739 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHJ10970.1| cytochrome c oxidase subunit 3 (mitochondrion) [R... 62 8e-08
gb|AFN06112.1| cytochrome c oxidase subunit 3 (mitochondrion) [G... 62 8e-08
ref|YP_003875546.1| cytochrome c oxidase subunit 3 (mitochondrio... 62 8e-08
gb|AFN42482.1| cytochrome c oxidase subunit 3 (mitochondrion) [R... 62 8e-08
ref|YP_002587032.1| cytochrome c oxidase subunit 3 (mitochondrio... 62 8e-08
ref|YP_008474725.1| cytochrome c oxidase subunit 3 (mitochondrio... 60 4e-07
dbj|GBC54036.1| Cytochrome c oxidase subunit III [Rhizophagus ir... 59 9e-07
gb|AMP88012.1| cytochrome c oxidase subunit 3 (mitochondrion) [F... 59 1e-06
ref|YP_009050445.1| cytochrome c oxidase subunit III (mitochondr... 59 2e-06
gb|AEV21530.1| cytochrome c oxidase subunit III, partial (mitoch... 57 2e-06
ref|YP_009233453.1| cytochrome c oxidase subunit 3 (mitochondrio... 57 8e-06
ref|YP_009233070.1| cytochrome c oxidase subunit 3 (mitochondrio... 57 8e-06
>gb|AHJ10970.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus sp.
DAOM 213198]
Length = 269
Score = 62.4 bits (150), Expect = 8e-08
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGAT 588
G SWPP IQPIDPWELPLVNTILLLSSGAT
Sbjct: 115 GCSWPPAGIQPIDPWELPLVNTILLLSSGAT 145
>gb|AFN06112.1| cytochrome c oxidase subunit 3 (mitochondrion) [Glomus sp. DAOM
229456]
Length = 269
Score = 62.4 bits (150), Expect = 8e-08
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGAT 588
G SWPP IQPIDPWELPLVNTILLLSSGAT
Sbjct: 115 GCSWPPAGIQPIDPWELPLVNTILLLSSGAT 145
>ref|YP_003875546.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
ref|YP_009228198.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
fasciculatus]
gb|ADM94802.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AGA14225.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AGA14257.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AGJ98050.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AGJ98074.1| cytochrome c oxidase subunit 3 (mitochondrion) [Glomus sp. DAOM
240422]
gb|AJK91329.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
fasciculatus]
gb|AJK91360.1| cytochrome c oxidase subunit 3 (mitochondrion) [Glomus aggregatum]
gb|AML60495.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AML60521.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AML60546.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AML60590.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
Length = 269
Score = 62.4 bits (150), Expect = 8e-08
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGAT 588
G SWPP IQPIDPWELPLVNTILLLSSGAT
Sbjct: 115 GCSWPPAGIQPIDPWELPLVNTILLLSSGAT 145
>gb|AFN42482.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
Length = 270
Score = 62.4 bits (150), Expect = 8e-08
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGAT 588
G SWPP IQPIDPWELPLVNTILLLSSGAT
Sbjct: 116 GCSWPPAGIQPIDPWELPLVNTILLLSSGAT 146
>ref|YP_002587032.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
intraradices]
gb|ACM45005.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
intraradices]
gb|AFN42451.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AFN42513.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AMM72610.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
Length = 270
Score = 62.4 bits (150), Expect = 8e-08
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGAT 588
G SWPP IQPIDPWELPLVNTILLLSSGAT
Sbjct: 116 GCSWPPAGIQPIDPWELPLVNTILLLSSGAT 146
>ref|YP_008474725.1| cytochrome c oxidase subunit 3 (mitochondrion) [Glomus
cerebriforme]
gb|AGJ98107.1| cytochrome c oxidase subunit 3 (mitochondrion) [Glomus
cerebriforme]
Length = 269
Score = 60.5 bits (145), Expect = 4e-07
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGAT 588
G SWPP IQPI+PWELPLVNT+LLLSSGAT
Sbjct: 115 GCSWPPAGIQPIEPWELPLVNTVLLLSSGAT 145
>dbj|GBC54036.1| Cytochrome c oxidase subunit III [Rhizophagus irregularis DAOM
181602]
Length = 265
Score = 59.3 bits (142), Expect = 9e-07
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGA 591
G SWPP IQPIDPWELPLVNTILLLSSG+
Sbjct: 96 GCSWPPAGIQPIDPWELPLVNTILLLSSGS 125
>gb|AMP88012.1| cytochrome c oxidase subunit 3 (mitochondrion) [Funneliformis
mosseae]
Length = 275
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGAT 588
G +WPP IQPIDPWE PLVNTILLLSSGAT
Sbjct: 115 GCAWPPAGIQPIDPWEWPLVNTILLLSSGAT 145
>ref|YP_009050445.1| cytochrome c oxidase subunit III (mitochondrion) [Paraglypturus
tonganus (nomen nudum)]
gb|AIG22700.1| cytochrome c oxidase subunit III (mitochondrion) [Paraglypturus
tonganus (nomen nudum)]
Length = 263
Score = 58.5 bits (140), Expect = 2e-06
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 19/108 (17%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGAT----QEKVSKW*FAESYLADTQTAVRNFF 513
G +WPP IQP +P+++PL+NTI+LLSSGAT + + ++S + T V F+
Sbjct: 115 GMTWPPLGIQPFNPFQIPLLNTIILLSSGATVTWAHHAIMESNHSQSMQSLGLTIVLGFY 174
Query: 512 SFFLKNDSFLSSSYHIIRSVH---------------IRMSLLLNICYY 414
FL+ ++ +S+ I SV+ I SL L++C+Y
Sbjct: 175 FTFLQGLEYVEASFTIADSVYGSTFFVATGFHGLHVIIGSLFLSVCWY 222
>gb|AEV21530.1| cytochrome c oxidase subunit III, partial (mitochondrion)
[Anguinella palmata]
Length = 182
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGAT-----QEKVSKW*FAESYLADTQTAVRNF 516
G SWPP + P+ PW +PL+NT++LLSSG T V+ W F ++ ++ T V
Sbjct: 57 GNSWPPAGVNPLSPWGVPLLNTVVLLSSGVTVTWAHHSLVAGW-FTDTSVSLLLTFVLGA 115
Query: 515 FSFFLKNDSFLSSSYHIIRSVH 450
+ FL+ +L +S+ I SV+
Sbjct: 116 YFTFLQAGEYLETSFAISDSVY 137
>ref|YP_009233453.1| cytochrome c oxidase subunit 3 (mitochondrion) [Engaewa
subcoerulea]
gb|AMB27346.1| cytochrome c oxidase subunit 3 (mitochondrion) [Engaewa
subcoerulea]
Length = 262
Score = 56.6 bits (135), Expect = 8e-06
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGAT----QEKVSKW*FAESYLADTQTAVRNFF 513
G WPPT IQP +P+++PL+NT +LLSSGAT + F+E+ + T V F+
Sbjct: 114 GMFWPPTGIQPFNPFQIPLLNTTILLSSGATVTWAHHAILNSNFSEATQSLGITVVLGFY 173
Query: 512 SFFLKNDSFLSSSYHIIRSVH 450
L+ +L SS+ I S++
Sbjct: 174 FTLLQAYEYLESSFSIADSIY 194
>ref|YP_009233070.1| cytochrome c oxidase subunit 3 (mitochondrion) [Engaewa walpolea]
gb|AMA98213.1| cytochrome c oxidase subunit 3 (mitochondrion) [Engaewa walpolea]
Length = 262
Score = 56.6 bits (135), Expect = 8e-06
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Frame = -3
Query: 680 GRSWPPTSIQPIDPWELPLVNTILLLSSGAT----QEKVSKW*FAESYLADTQTAVRNFF 513
G WPPT IQP +P+++PL+NT +LLSSGAT + F+E+ + T + F+
Sbjct: 114 GMFWPPTGIQPFNPFQIPLLNTTILLSSGATVTWAHHAILNSNFSEAIQSLGITVILGFY 173
Query: 512 SFFLKNDSFLSSSYHIIRSVH 450
L+ +L SS+ I S++
Sbjct: 174 FTLLQAYEYLESSFSIADSIY 194