BLASTX nr result

ID: Ophiopogon27_contig00030292 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00030292
         (614 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK67985.1| uncharacterized protein A4U43_C05F5960 [Asparagus...   100   2e-22
gb|ONK57668.1| uncharacterized protein A4U43_C09F2850 [Asparagus...    59   4e-07

>gb|ONK67985.1| uncharacterized protein A4U43_C05F5960 [Asparagus officinalis]
          Length = 231

 Score =  100 bits (249), Expect = 2e-22
 Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 13/139 (9%)
 Frame = +1

Query: 142 MDEWWKVFNGYQLGCGPIKEHRQSWNVLACWLLWLDRNDRIFNNNSKEVEDIFEAVHALV 321
           M EWW + +G  +G G +K  RQ+WN    WLL LDRN+ +FNN  +  E IFE+ ++LV
Sbjct: 1   MAEWWNILHGVGIGFGLVKAFRQAWNAYTAWLLLLDRNNSVFNNQMRPNEAIFESCNSLV 60

Query: 322 QEQFSVVRM*AKAEDLCLTP*LGTFD-------------QPPMAGWIKLNFDGARKVARA 462
            EQF+   + A  E+L L    G                +PP   WIK+NFDGA K+  +
Sbjct: 61  LEQFASCPIEAPQEELSLLMAWGLRPTITNSQAPTMVAWEPPRDNWIKINFDGACKLDSS 120

Query: 463 RAWGGFVIRTSDVVICAAS 519
           +A  GF+IR +   I AA+
Sbjct: 121 KAGTGFLIRCAGSPILAAT 139


>gb|ONK57668.1| uncharacterized protein A4U43_C09F2850 [Asparagus officinalis]
          Length = 229

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 27/69 (39%), Positives = 42/69 (60%)
 Frame = +1

Query: 169 GYQLGCGPIKEHRQSWNVLACWLLWLDRNDRIFNNNSKEVEDIFEAVHALVQEQFSVVRM 348
           G  +G G +K  RQ+W     WL W DRN+ +FNN  +  E +F++ ++LV EQF+   +
Sbjct: 2   GVGIGSGLVKAFRQAWIAYTTWLFWFDRNNSVFNNQRRPSEAMFKSCNSLVLEQFASCPI 61

Query: 349 *AKAEDLCL 375
            A+ E+L L
Sbjct: 62  EAQWEELSL 70


Top