BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00030051
         (361 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020099832.1| DNA-directed RNA polymerase V subunit 5A-lik...    74   8e-14
ref|XP_020099833.1| DNA-directed RNA polymerase V subunit 5A-lik...    74   1e-13
gb|OAY74461.1| DNA-directed RNA polymerase V subunit 5A [Ananas ...    74   1e-13
ref|XP_020251677.1| DNA-directed RNA polymerase V subunit 5A-lik...    70   3e-12
ref|XP_008808787.1| PREDICTED: DNA-directed RNA polymerase V sub...    67   3e-12
ref|XP_010237978.1| PREDICTED: DNA-directed RNA polymerase V sub...    70   4e-12
ref|XP_010922168.1| PREDICTED: DNA-directed RNA polymerase V sub...    67   1e-11
ref|XP_010922166.1| PREDICTED: DNA-directed RNA polymerase V sub...    67   4e-11
gb|EMS50923.1| DNA-directed RNA polymerases I, II, and III subun...    65   4e-11
emb|CBX25472.1| hypothetical_protein [Oryza glaberrima]                66   1e-10
dbj|BAF29138.1| Os12g0139500 [Oryza sativa Japonica Group] >gi|1...    66   2e-10
gb|KMZ70843.1| DNA-directed RNA polymerase V subunit 5A, partial...    62   2e-10
ref|XP_010247052.1| PREDICTED: DNA-directed RNA polymerases IV a...    65   3e-10
ref|XP_015619629.1| PREDICTED: DNA-directed RNA polymerase V sub...    66   4e-10
ref|XP_009418150.1| PREDICTED: DNA-directed RNA polymerase V sub...    65   4e-10
ref|XP_020160427.1| DNA-directed RNA polymerases IV and V subuni...    65   4e-10
ref|XP_003577067.1| PREDICTED: DNA-directed RNA polymerase V sub...    65   5e-10
ref|XP_019077235.1| PREDICTED: DNA-directed RNA polymerase V sub...    64   7e-10
ref|XP_020683696.1| DNA-directed RNA polymerase V subunit 5A-lik...    64   7e-10
ref|XP_021282150.1| DNA-directed RNA polymerase V subunit 5A iso...    63   1e-09

>ref|XP_020099832.1| DNA-directed RNA polymerase V subunit 5A-like isoform X1 [Ananas
           comosus]
          Length = 212

 Score = 74.3 bits (181), Expect = 8e-14
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCVM 243
           RMLE+DAIARYY  EKGTV+++TYDGELTGSH+TYRC+M
Sbjct: 174 RMLETDAIARYYGLEKGTVMKVTYDGELTGSHVTYRCIM 212


>ref|XP_020099833.1| DNA-directed RNA polymerase V subunit 5A-like isoform X2 [Ananas
           comosus]
 ref|XP_020099834.1| DNA-directed RNA polymerase V subunit 5A-like isoform X3 [Ananas
           comosus]
          Length = 230

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCVM 243
           RMLE+DAIARYY  EKGTV+++TYDGELTGSH+TYRC+M
Sbjct: 192 RMLETDAIARYYGLEKGTVMKVTYDGELTGSHVTYRCIM 230


>gb|OAY74461.1| DNA-directed RNA polymerase V subunit 5A [Ananas comosus]
          Length = 230

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCVM 243
           RMLE+DAIARYY  EKGTV+++TYDGELTGSH+TYRC+M
Sbjct: 192 RMLETDAIARYYGLEKGTVMKVTYDGELTGSHVTYRCIM 230


>ref|XP_020251677.1| DNA-directed RNA polymerase V subunit 5A-like [Asparagus
           officinalis]
          Length = 185

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCVM 243
           RMLESDA+A+YY YEKGT+L+ITY GELT +H+TYRCV+
Sbjct: 147 RMLESDAVAKYYGYEKGTILKITYGGELTKNHVTYRCVV 185


>ref|XP_008808787.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Phoenix
           dactylifera]
          Length = 85

 Score = 67.0 bits (162), Expect = 3e-12
 Identities = 27/39 (69%), Positives = 35/39 (89%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCVM 243
           RMLE+DA+ARYY  +KG V+++TYDGELT SH+TYRC+M
Sbjct: 47  RMLETDAVARYYGLQKGQVVKVTYDGELTRSHVTYRCIM 85


>ref|XP_010237978.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A [Brachypodium
           distachyon]
 gb|KQJ89582.1| hypothetical protein BRADI_4g26550v3 [Brachypodium distachyon]
          Length = 255

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCV 246
           RMLE+DAIARYY   KGTVLR+TYDGELTG+H+TYRC+
Sbjct: 217 RMLETDAIARYYGLGKGTVLRVTYDGELTGNHVTYRCI 254


>ref|XP_010922168.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X3
           [Elaeis guineensis]
          Length = 158

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCVM 243
           RMLE+DAIARYY  +KG V+++TYDGELT SH+TYRC+M
Sbjct: 120 RMLETDAIARYYGLQKGQVVKVTYDGELTRSHVTYRCIM 158


>ref|XP_010922166.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X1
           [Elaeis guineensis]
          Length = 217

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCVM 243
           RMLE+DAIARYY  +KG V+++TYDGELT SH+TYRC+M
Sbjct: 179 RMLETDAIARYYGLQKGQVVKVTYDGELTRSHVTYRCIM 217


>gb|EMS50923.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Triticum urartu]
          Length = 99

 Score = 64.7 bits (156), Expect = 4e-11
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCV 246
           RMLE+D +ARYY   KGTVL++TYD ELTG+H+TYRC+
Sbjct: 61  RMLETDPVARYYGLGKGTVLKVTYDSELTGNHVTYRCI 98


>emb|CBX25472.1| hypothetical_protein [Oryza glaberrima]
          Length = 206

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCV 246
           RMLE+DA+ARYY ++KGTV+++TYDGELTG  + YRCV
Sbjct: 168 RMLETDAVARYYGFDKGTVVKVTYDGELTGKRVAYRCV 205


>dbj|BAF29138.1| Os12g0139500 [Oryza sativa Japonica Group]
 gb|EAY82213.1| hypothetical protein OsI_37416 [Oryza sativa Indica Group]
 gb|EAZ19600.1| hypothetical protein OsJ_35178 [Oryza sativa Japonica Group]
 emb|CBX24428.1| hypothetical_protein [Oryza glaberrima]
 dbj|BAT15828.1| Os12g0139500 [Oryza sativa Japonica Group]
          Length = 227

 Score = 65.9 bits (159), Expect = 2e-10
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCV 246
           RMLE+DA+ARYY ++KGTV+++TYDGELTG  + YRCV
Sbjct: 189 RMLETDAVARYYGFDKGTVVKVTYDGELTGKRVAYRCV 226


>gb|KMZ70843.1| DNA-directed RNA polymerase V subunit 5A, partial [Zostera marina]
          Length = 79

 Score = 62.4 bits (150), Expect = 2e-10
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCVM 243
           RMLE+DAIARYY  EKG V+++TYDGE TG  + YRCVM
Sbjct: 41  RMLETDAIARYYGIEKGRVIKVTYDGEHTGHFVNYRCVM 79


>ref|XP_010247052.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B-like
           [Nelumbo nucifera]
          Length = 223

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCVM 243
           RML+SDAIARYY  EKG V+++ Y GE+TGSH+TYRCV+
Sbjct: 185 RMLQSDAIARYYGLEKGQVVKVIYSGEITGSHVTYRCVV 223


>ref|XP_015619629.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A [Oryza sativa
           Japonica Group]
 gb|ABA96407.2| RNA polymerase Rpb5, N-terminal domain containing protein,
           expressed [Oryza sativa Japonica Group]
          Length = 335

 Score = 65.9 bits (159), Expect = 4e-10
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCV 246
           RMLE+DA+ARYY ++KGTV+++TYDGELTG  + YRCV
Sbjct: 297 RMLETDAVARYYGFDKGTVVKVTYDGELTGKRVAYRCV 334


>ref|XP_009418150.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Musa
           acuminata subsp. malaccensis]
          Length = 221

 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 26/39 (66%), Positives = 35/39 (89%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCVM 243
           RML+SDA+ARYY +EKG V+++TY+GELTG H TYRC++
Sbjct: 183 RMLKSDAVARYYGFEKGQVVKVTYNGELTGHHETYRCIV 221


>ref|XP_020160427.1| DNA-directed RNA polymerases IV and V subunit 5B-like [Aegilops
           tauschii subsp. tauschii]
          Length = 226

 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCV 246
           RMLE+D +ARYY   KGTVL++TYD ELTG+H+TYRC+
Sbjct: 188 RMLETDPVARYYGLGKGTVLKVTYDSELTGNHVTYRCI 225


>ref|XP_003577067.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like
           [Brachypodium distachyon]
 gb|KQJ92354.1| hypothetical protein BRADI_4g43080v3 [Brachypodium distachyon]
          Length = 270

 Score = 65.1 bits (157), Expect = 5e-10
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -3

Query: 356 MLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCV 246
           MLE+DA+ARYY   KGT+++ITYDGELTG H+TYRC+
Sbjct: 233 MLENDAVARYYGLGKGTIVKITYDGELTGHHVTYRCI 269


>ref|XP_019077235.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X2
           [Vitis vinifera]
          Length = 191

 Score = 63.5 bits (153), Expect = 7e-10
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCV 246
           RML+ DAIARYY  EKG V+++ Y+GE+TGSH+TYRCV
Sbjct: 153 RMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCV 190


>ref|XP_020683696.1| DNA-directed RNA polymerase V subunit 5A-like [Dendrobium
           catenatum]
 gb|PKU82638.1| hypothetical protein MA16_Dca018796 [Dendrobium catenatum]
          Length = 217

 Score = 63.9 bits (154), Expect = 7e-10
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCVM 243
           RMLE DA+ARY+  EKGTV+++TYD E+TGSH TYRC++
Sbjct: 179 RMLEKDAVARYFGLEKGTVVKVTYDREITGSHETYRCIV 217


>ref|XP_021282150.1| DNA-directed RNA polymerase V subunit 5A isoform X2 [Herrania
           umbratica]
          Length = 169

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = -3

Query: 359 RMLESDAIARYYAYEKGTVLRITYDGELTGSHITYRCV 246
           R+L+ DAIARYY YE+G V+++ YDGE+T SH+TYRCV
Sbjct: 131 RLLKKDAIARYYGYERGQVVKVMYDGEITQSHVTYRCV 168