BLASTX nr result

ID: Ophiopogon27_contig00029952 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00029952
         (358 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020249467.1| eukaryotic translation initiation factor 4B3...    57   4e-07
gb|ONK57103.1| uncharacterized protein A4U43_C10F16650 [Asparagu...    57   4e-07
gb|ONK71404.1| uncharacterized protein A4U43_C04F8200 [Asparagus...    55   8e-07
ref|XP_010920187.1| PREDICTED: eukaryotic translation initiation...    54   9e-06

>ref|XP_020249467.1| eukaryotic translation initiation factor 4B3-like [Asparagus
           officinalis]
          Length = 319

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 38/68 (55%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
 Frame = +1

Query: 121 SHQPTADFPSLSAAATTKIPXXXXXNQTLSLXXXXXXXXXXXG-GKFQPSSKTLTL--DE 291
           S   +ADFPSLSAAA TKIP      QTL+L           G GKFQP S+ LTL  DE
Sbjct: 6   SSSDSADFPSLSAAAVTKIP-KKKKKQTLTLAEYTSGTAVNPGAGKFQPPSRALTLTPDE 64

Query: 292 QLALPTGP 315
            LALPTGP
Sbjct: 65  LLALPTGP 72


>gb|ONK57103.1| uncharacterized protein A4U43_C10F16650 [Asparagus officinalis]
          Length = 556

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 38/68 (55%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
 Frame = +1

Query: 121 SHQPTADFPSLSAAATTKIPXXXXXNQTLSLXXXXXXXXXXXG-GKFQPSSKTLTL--DE 291
           S   +ADFPSLSAAA TKIP      QTL+L           G GKFQP S+ LTL  DE
Sbjct: 243 SSSDSADFPSLSAAAVTKIP-KKKKKQTLTLAEYTSGTAVNPGAGKFQPPSRALTLTPDE 301

Query: 292 QLALPTGP 315
            LALPTGP
Sbjct: 302 LLALPTGP 309


>gb|ONK71404.1| uncharacterized protein A4U43_C04F8200 [Asparagus officinalis]
          Length = 194

 Score = 55.5 bits (132), Expect = 8e-07
 Identities = 43/104 (41%), Positives = 48/104 (46%)
 Frame = +1

Query: 4   MAAVSAWTKPGXXXXXXXXXXXXXXXXXXXXXXXXXSSDSHQPTADFPSLSAAATTKIPX 183
           MAAVSAW KPG                         +  S  P++ FPSLSAAA TKIP 
Sbjct: 1   MAAVSAWAKPGSLALESSTRKIRPATSAYTRLLILTTLTS--PSSAFPSLSAAAVTKIPK 58

Query: 184 XXXXNQTLSLXXXXXXXXXXXGGKFQPSSKTLTLDEQLALPTGP 315
                QTL+L             KFQPS KTL   E L+LPTGP
Sbjct: 59  KKK-KQTLTLAEFNAGTT-----KFQPSYKTLVPVELLSLPTGP 96


>ref|XP_010920187.1| PREDICTED: eukaryotic translation initiation factor 4B3 [Elaeis
           guineensis]
          Length = 435

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 41/108 (37%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
 Frame = +1

Query: 4   MAAVSAWTKPGXXXXXXXXXXXXXXXXXXXXXXXXXSSDSHQ-PTADFPSLSAAATTKIP 180
           MA VSAW KPG                         +S  +Q P+ADFPSL+ AA     
Sbjct: 1   MAEVSAWAKPGAWALDAEEHEAELQQKDKGYDSSDSNSHPYQEPSADFPSLATAAAASKT 60

Query: 181 XXXXXNQTLSLXXXXXXXXXXXG-GKFQPSS--KTLTLDEQLALPTGP 315
                 Q LSL           G G+FQ SS  K LT DE L LPTGP
Sbjct: 61  SKKKKGQRLSLAEFTTGNAVTHGAGRFQSSSSSKGLTSDEHLVLPTGP 108


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