BLASTX nr result

ID: Ophiopogon27_contig00029828 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00029828
         (784 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248636.1| translocase of chloroplast 120, chloroplasti...    83   3e-14
ref|XP_010920185.1| PREDICTED: translocase of chloroplast 120, c...    61   9e-07

>ref|XP_020248636.1| translocase of chloroplast 120, chloroplastic [Asparagus
           officinalis]
 gb|ONK57100.1| uncharacterized protein A4U43_C10F16620 [Asparagus officinalis]
          Length = 1215

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 53/132 (40%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
 Frame = -3

Query: 386 DAQVIDQNPEEQEAENIQVFDGGEADE---TKLNGVEDDCMTEVGLGEPQDDGERSLENG 216
           D QV DQ+ E++E         GE +E   TKLNG+E D + + G    +D GE+  ENG
Sbjct: 184 DVQVSDQSGEDREGVG-----SGEEEEVFVTKLNGLEGDDVVKEGSFGSKDVGEKGFENG 238

Query: 215 HKSLTEEEPGNGEYNGAVSDEK-------VQNGVSLVVTSNEMGVNSVTESKKET-TDEL 60
            K LTE++  NGE NG VSDE        ++NG+SLV +S+E+ V + ++SK++   DE+
Sbjct: 239 DKELTEDKLDNGECNGTVSDEGHNVLHEILENGLSLVASSDEICVGTASKSKEQAPADEI 298

Query: 59  AVDTGIESYEKT 24
            V+   +S E+T
Sbjct: 299 CVEAVTQSEEQT 310



 Score = 51.6 bits (122), Expect(2) = 4e-07
 Identities = 34/62 (54%), Positives = 38/62 (61%), Gaps = 13/62 (20%)
 Frame = -2

Query: 690 GVLKLKSAENG-------SKEESKG------ENDVFEEAAMDSESFYTPASASRHGASDS 550
           G LKL+S +NG       S EESKG      END FEEA +D ESFYTP  A RH  SDS
Sbjct: 35  GNLKLESTDNGLNGLEEDSVEESKGSVRGSEENDEFEEAELDRESFYTP--AYRHMGSDS 92

Query: 549 QE 544
           Q+
Sbjct: 93  QD 94



 Score = 31.2 bits (69), Expect(2) = 4e-07
 Identities = 31/108 (28%), Positives = 47/108 (43%)
 Frame = -3

Query: 476 EDGDNPDREDGNLAGNSIDXXXXXXXXXXVDAQVIDQNPEEQEAENIQVFDGGEADETKL 297
           EDGDN DRE   +  +S                    N EE  + N +     E  +TKL
Sbjct: 112 EDGDNQDREAKEVVDSS--------------------NVEELGSGNKE-----EVFDTKL 146

Query: 296 NGVEDDCMTEVGLGEPQDDGERSLENGHKSLTEEEPGNGEYNGAVSDE 153
           NGVE D +T V     +D  E+ + +   ++ +EE    + +  VSD+
Sbjct: 147 NGVEVDRVTRVA----EDQEEKEMVDDLCAVEQEEVIPDKTDVQVSDQ 190


>ref|XP_010920185.1| PREDICTED: translocase of chloroplast 120, chloroplastic [Elaeis
           guineensis]
          Length = 1220

 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 27/139 (19%)
 Frame = -3

Query: 386 DAQVIDQNPEEQEAENI-------------QVFDGGEADETKLNGVEDDCMTEVGLGE-- 252
           DAQV D + EEQ A  +             QV D  EA  T+LNGVE D +    +G+  
Sbjct: 202 DAQVNDHSYEEQGATEVEASAESDHSLPLKQVEDRREAMPTELNGVEADDVISENVGDVV 261

Query: 251 -----PQDDGERSLENGHKSLTEEEPGNGEYNGAVSD-------EKVQNGVSLVVTSNEM 108
                P +DGE  LE+  +   +E   +GE +  +SD       EK +NG SL V  ++ 
Sbjct: 262 KVSSIPVNDGEVILEDSKEEFVDENSNDGEPDEVISDGLHVAVYEKTENGGSLEVVFDKN 321

Query: 107 GVNSVTESKKETTDELAVD 51
            V+  T+SK++T  +  VD
Sbjct: 322 SVSCGTDSKEQTPHDDGVD 340