BLASTX nr result

ID: Ophiopogon27_contig00029789 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00029789
         (384 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020246347.1| uncharacterized CRM domain-containing protei...    54   7e-06

>ref|XP_020246347.1| uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic isoform X1 [Asparagus officinalis]
          Length = 487

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 15/92 (16%)
 Frame = +3

Query: 153 QSMAIPSLFLQRLRPRSAIXXXXXXXXXXXXXNQLHPCKNSRLQRNFSCGLGNFTQFERK 332
           +SMAIPSLFLQRLRPR                NQ  PC  S   R+ + G GN T+FER+
Sbjct: 4   RSMAIPSLFLQRLRPRRT-SHHQLLSNFPRLRNQEDPCNKSWALRSVNSGYGNLTKFERE 62

Query: 333 S---------------RLVNGPDCTPFMGFCS 383
           S               R ++G +CT F   C+
Sbjct: 63  SSLAPFCKVLDQISVNRFLSGLECTRFTRICT 94


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