BLASTX nr result

ID: Ophiopogon27_contig00029624 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00029624
         (538 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK62690.1| uncharacterized protein A4U43_C07F6950 [Asparagus...    60   4e-08
ref|XP_020273782.1| RNA pseudouridine synthase 5 [Asparagus offi...    60   3e-07

>gb|ONK62690.1| uncharacterized protein A4U43_C07F6950 [Asparagus officinalis]
          Length = 143

 Score = 59.7 bits (143), Expect = 4e-08
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +2

Query: 2   QLICCHPSTNEMVAITAPLPSILQTRKELAKETF 103
           +LI CHPSTNEMV ITAPLP IL+TRKEL KETF
Sbjct: 110 RLIFCHPSTNEMVEITAPLPPILKTRKELVKETF 143


>ref|XP_020273782.1| RNA pseudouridine synthase 5 [Asparagus officinalis]
          Length = 386

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +2

Query: 2   QLICCHPSTNEMVAITAPLPSILQTRKELAKETF 103
           +LI CHPSTNEMV ITAPLP IL+TRKEL KETF
Sbjct: 353 RLIFCHPSTNEMVEITAPLPPILKTRKELVKETF 386


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