BLASTX nr result

ID: Ophiopogon27_contig00029548 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00029548
         (651 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK71061.1| uncharacterized protein A4U43_C04F4300 [Asparagus...    59   2e-06
ref|XP_020260144.1| nucleolar complex protein 4 homolog isoform ...    59   2e-06
ref|XP_020260143.1| nucleolar complex protein 4 homolog isoform ...    59   2e-06
ref|XP_020260142.1| nucleolar complex protein 4 homolog isoform ...    59   2e-06

>gb|ONK71061.1| uncharacterized protein A4U43_C04F4300 [Asparagus officinalis]
          Length = 578

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
 Frame = +3

Query: 117 RDDEALKDVALDAIMDFAKLGKEGKFQSAIY---LPSVSSHH*CITNQTERMKDCL*SLI 287
           R +EALKDVALDAIMDF KLGK+GKFQSAIY   L S+  +    T+  + + D L S  
Sbjct: 123 RSEEALKDVALDAIMDFVKLGKDGKFQSAIYHRLLHSIVRN----TSSVDSLIDLLASKY 178

Query: 288 QNH-KVRIFGSTQLTKISQVYN 350
             +  VR F  T L K++   N
Sbjct: 179 FKYLDVRYFTYTSLYKVANDSN 200


>ref|XP_020260144.1| nucleolar complex protein 4 homolog isoform X3 [Asparagus
           officinalis]
          Length = 628

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
 Frame = +3

Query: 117 RDDEALKDVALDAIMDFAKLGKEGKFQSAIY---LPSVSSHH*CITNQTERMKDCL*SLI 287
           R +EALKDVALDAIMDF KLGK+GKFQSAIY   L S+  +    T+  + + D L S  
Sbjct: 123 RSEEALKDVALDAIMDFVKLGKDGKFQSAIYHRLLHSIVRN----TSSVDSLIDLLASKY 178

Query: 288 QNH-KVRIFGSTQLTKISQVYN 350
             +  VR F  T L K++   N
Sbjct: 179 FKYLDVRYFTYTSLYKVANDSN 200


>ref|XP_020260143.1| nucleolar complex protein 4 homolog isoform X2 [Asparagus
           officinalis]
          Length = 628

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
 Frame = +3

Query: 117 RDDEALKDVALDAIMDFAKLGKEGKFQSAIY---LPSVSSHH*CITNQTERMKDCL*SLI 287
           R +EALKDVALDAIMDF KLGK+GKFQSAIY   L S+  +    T+  + + D L S  
Sbjct: 123 RSEEALKDVALDAIMDFVKLGKDGKFQSAIYHRLLHSIVRN----TSSVDSLIDLLASKY 178

Query: 288 QNH-KVRIFGSTQLTKISQVYN 350
             +  VR F  T L K++   N
Sbjct: 179 FKYLDVRYFTYTSLYKVANDSN 200


>ref|XP_020260142.1| nucleolar complex protein 4 homolog isoform X1 [Asparagus
           officinalis]
          Length = 629

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
 Frame = +3

Query: 117 RDDEALKDVALDAIMDFAKLGKEGKFQSAIY---LPSVSSHH*CITNQTERMKDCL*SLI 287
           R +EALKDVALDAIMDF KLGK+GKFQSAIY   L S+  +    T+  + + D L S  
Sbjct: 123 RSEEALKDVALDAIMDFVKLGKDGKFQSAIYHRLLHSIVRN----TSSVDSLIDLLASKY 178

Query: 288 QNH-KVRIFGSTQLTKISQVYN 350
             +  VR F  T L K++   N
Sbjct: 179 FKYLDVRYFTYTSLYKVANDSN 200


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