BLASTX nr result
ID: Ophiopogon27_contig00029509
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00029509
(458 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ76355.1| RNA-dependent RNA polymerase, partial [Soybean dw... 213 7e-64
dbj|BAB62835.1| replicase, partial [Soybean dwarf virus] >gi|275... 213 1e-63
dbj|BAB62830.1| replicase, partial [Soybean dwarf virus] 213 1e-63
dbj|BAB62825.1| replicase, partial [Soybean dwarf virus] 210 8e-63
gb|ATY36300.1| RNA dependent RNA polymerase P1-P2 fusion [Apple-... 215 3e-62
dbj|BAB62820.1| replicase, partial [Soybean dwarf virus] 207 8e-62
gb|AII15913.1| RNA-dependent RNA polymerase P1-P2 fusion protein... 213 2e-61
gb|AII15905.1| RNA-dependent RNA polymerase P1-P2 fusion protein... 213 2e-61
ref|YP_001949736.1| RNA-dependent RNA polymerase P1-P2 fusion pr... 212 2e-61
gb|AAA17535.1| RNA-dependent RNA polymerase, partial [Soybean dw... 206 5e-61
gb|AFP55349.1| RNA-dependent RNA polymerase [Soybean dwarf virus] 211 6e-61
gb|AFP55345.1| RNA-dependent RNA polymerase [Soybean dwarf virus] 211 6e-61
gb|AFP55337.1| RNA-dependent RNA polymerase [Soybean dwarf virus... 211 6e-61
gb|AFP55333.1| RNA-dependent RNA polymerase [Soybean dwarf virus] 211 6e-61
gb|AFP55353.1| RNA-dependent RNA polymerase [Soybean dwarf virus] 211 8e-61
ref|NP_150431.3| replicase [Soybean dwarf virus] 207 1e-59
ref|YP_009316228.1| P1-P2 polyprotein [Cherry associated luteovi... 201 4e-57
ref|NP_563609.1| RNA-dependent RNA polymerase P1-P2 fusion [Bean... 199 1e-56
gb|ALX34940.1| RNA-dependent RNA polymerase P1-P2 fusion [Bean l... 199 1e-56
ref|YP_009380510.1| RNA dependent RNA polymerase P1-P2 fusion [P... 197 7e-56
>gb|AAZ76355.1| RNA-dependent RNA polymerase, partial [Soybean dwarf virus]
Length = 516
Score = 213 bits (541), Expect = 7e-64
Identities = 110/151 (72%), Positives = 122/151 (80%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
IN LSQFSLGL Y PNPSLHNALVAVERRVFTVGKG+E+VLP GIF NL+YF ++
Sbjct: 41 INYLSQFSLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVLPYKNIPGIFSNLDYFRKS 100
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I++ VG +TFSP ELA TY SGKR Y AV SL + ++DANVTAFLKMEKHLMCK
Sbjct: 101 IVDKVGCPRTFSPEELAATYHSGKRTLYNAAVQSLKRKAVERSDANVTAFLKMEKHLMCK 160
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 161 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 191
>dbj|BAB62835.1| replicase, partial [Soybean dwarf virus]
dbj|BAC54064.1| replicase, partial [Soybean dwarf virus]
Length = 537
Score = 213 bits (541), Expect = 1e-63
Identities = 110/151 (72%), Positives = 122/151 (80%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
IN LSQFSLGL Y PNPSLHNALVAVERRVFTVGKG+E+VLP GIF NL+YF ++
Sbjct: 41 INYLSQFSLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVLPYKNIPGIFSNLDYFRKS 100
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I++ VG +TFSP ELA TY SGKR Y AV SL + ++DANVTAFLKMEKHLMCK
Sbjct: 101 IVDKVGCPRTFSPEELAATYHSGKRTLYNAAVQSLKRKAVERSDANVTAFLKMEKHLMCK 160
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 161 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 191
>dbj|BAB62830.1| replicase, partial [Soybean dwarf virus]
Length = 537
Score = 213 bits (541), Expect = 1e-63
Identities = 110/151 (72%), Positives = 122/151 (80%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
IN LSQFSLGL Y PNPSLHNALVAVERRVFTVGKG+E+VLP GIF NL+YF ++
Sbjct: 41 INYLSQFSLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVLPYKNIPGIFSNLDYFRKS 100
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I++ VG +TFSP ELA TY SGKR Y AV SL + ++DANVTAFLKMEKHLMCK
Sbjct: 101 IVDKVGCPRTFSPEELAATYHSGKRTLYNAAVQSLKRKAVERSDANVTAFLKMEKHLMCK 160
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 161 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 191
>dbj|BAB62825.1| replicase, partial [Soybean dwarf virus]
Length = 535
Score = 210 bits (535), Expect = 8e-63
Identities = 107/151 (70%), Positives = 123/151 (81%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
I+ LSQF+LGL Y PNPSLHNALVAVERRVFTVGKG+E+VLP + GIF NL+YF ++
Sbjct: 39 ISYLSQFTLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVLPYKNKTGIFSNLDYFRDS 98
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I+N VG +T +P ELA TY SGKR+ Y AV SL + ++DANVTAFLKMEKHLMCK
Sbjct: 99 IVNKVGCPRTHTPEELAATYHSGKRSLYNAAVQSLKKKAVERSDANVTAFLKMEKHLMCK 158
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 159 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 189
>gb|ATY36300.1| RNA dependent RNA polymerase P1-P2 fusion [Apple-associated
luteovirus]
Length = 951
Score = 215 bits (548), Expect = 3e-62
Identities = 109/151 (72%), Positives = 118/151 (78%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
IN LS SLGL Y VPNPSLHNALVAVERRVFTVGKG +IVLPP + +F LNYF +
Sbjct: 460 INFLSDLSLGLSYQVPNPSLHNALVAVERRVFTVGKGQDIVLPPRARREVFDKLNYFRDF 519
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
++ VGY KT SPM LA TY SGKR YI AV L +P C+ DANVTAFLKMEKHLMCK
Sbjct: 520 VVKNVGYCKTHSPMSLAQTYKSGKRLQYIHAVLQLRRKPICRQDANVTAFLKMEKHLMCK 579
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
IAPRLICPRSKRYNV LGRRLKF+EKK MH
Sbjct: 580 DIAPRLICPRSKRYNVELGRRLKFSEKKFMH 610
>dbj|BAB62820.1| replicase, partial [Soybean dwarf virus]
Length = 535
Score = 207 bits (528), Expect = 8e-62
Identities = 107/151 (70%), Positives = 122/151 (80%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
I+ LSQF+LGL Y PNPSLHNALVAVERRVFTVGKG+E+VLP + GIF NLNYF ++
Sbjct: 39 ISFLSQFTLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVLPYKNKPGIFTNLNYFRDS 98
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I+N VG +T +P ELA TY SGKR+ Y AV SL + ++DANVTAFLKMEKHLM K
Sbjct: 99 IVNKVGCPRTHTPEELAATYHSGKRSLYNAAVQSLKKKAVERSDANVTAFLKMEKHLMSK 158
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 159 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 189
>gb|AII15913.1| RNA-dependent RNA polymerase P1-P2 fusion protein [Soybean dwarf
virus]
Length = 894
Score = 213 bits (541), Expect = 2e-61
Identities = 110/151 (72%), Positives = 122/151 (80%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
IN LSQFSLGL Y PNPSLHNALVAVERRVFTVGKG+E+VLP GIF NL+YF ++
Sbjct: 398 INYLSQFSLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVLPYKNIPGIFSNLDYFRKS 457
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I++ VG +TFSP ELA TY SGKR Y AV SL + ++DANVTAFLKMEKHLMCK
Sbjct: 458 IVDKVGCPRTFSPEELAATYHSGKRTLYNAAVQSLKRKAVERSDANVTAFLKMEKHLMCK 517
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 518 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 548
>gb|AII15905.1| RNA-dependent RNA polymerase P1-P2 fusion protein [Soybean dwarf
virus]
Length = 894
Score = 213 bits (541), Expect = 2e-61
Identities = 110/151 (72%), Positives = 122/151 (80%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
IN LSQFSLGL Y PNPSLHNALVAVERRVFTVGKG+E+VLP GIF NL+YF ++
Sbjct: 398 INYLSQFSLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVLPYKNIPGIFSNLDYFRKS 457
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I++ VG +TFSP ELA TY SGKR Y AV SL + ++DANVTAFLKMEKHLMCK
Sbjct: 458 IVDKVGCPRTFSPEELAATYHSGKRTLYNAAVQSLKRKAVERSDANVTAFLKMEKHLMCK 517
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 518 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 548
>ref|YP_001949736.1| RNA-dependent RNA polymerase P1-P2 fusion protein [Rose spring
dwarf-associated virus]
gb|ABV89765.1| RNA-dependent RNA polymerase P1-P2 fusion protein [Rose spring
dwarf-associated virus]
Length = 901
Score = 212 bits (540), Expect = 2e-61
Identities = 106/150 (70%), Positives = 121/150 (80%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
I+ +SQ +LGL Y VPNPSLHNALVAVERRVFTVGKG +I LPP P++ IF L YF+E
Sbjct: 411 ISYVSQVALGLNYQVPNPSLHNALVAVERRVFTVGKGDKIELPPQPKSEIFQRLAYFAEG 470
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
+I GY KT SP+ELA++Y SGKR Y+KAV SL + P NDA VTAFLKMEKHLMCK
Sbjct: 471 VIRHSGYCKTHSPLELAMSYESGKRALYLKAVRSLQSSPVNANDAKVTAFLKMEKHLMCK 530
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVM 455
IAPRLICPRSKRYNV LGRRLKFNEK++M
Sbjct: 531 PIAPRLICPRSKRYNVELGRRLKFNEKRIM 560
>gb|AAA17535.1| RNA-dependent RNA polymerase, partial [Soybean dwarf virus]
Length = 535
Score = 206 bits (523), Expect = 5e-61
Identities = 106/151 (70%), Positives = 122/151 (80%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
I+ LSQF+LGL Y PNPSLHNALVAVERRVFTVGKG+E+VLP + GIF NL+YF ++
Sbjct: 39 ISFLSQFTLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVLPYKNKPGIFSNLDYFRDS 98
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I+N VG +T +P ELA TY SGKR+ Y AV SL + ++DANVTAFLKMEKHLM K
Sbjct: 99 IVNKVGCPRTHTPEELAATYHSGKRSLYNAAVQSLKKKAVERSDANVTAFLKMEKHLMSK 158
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 159 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 189
>gb|AFP55349.1| RNA-dependent RNA polymerase [Soybean dwarf virus]
Length = 894
Score = 211 bits (537), Expect = 6e-61
Identities = 109/151 (72%), Positives = 123/151 (81%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
I+ LSQF+LGL Y PNPSLHNALVAVERRVFTVGKG+EIVLP + GIF NL+YF ++
Sbjct: 398 ISFLSQFTLGLDYQCPNPSLHNALVAVERRVFTVGKGNEIVLPYKNKPGIFSNLDYFRDS 457
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I+N VG +T SP ELA TY SGKR+ Y AV SL + ++DANVTAFLKMEKHLMCK
Sbjct: 458 IVNKVGCPRTHSPEELAATYHSGKRSLYNAAVQSLKKKAVERSDANVTAFLKMEKHLMCK 517
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 518 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 548
>gb|AFP55345.1| RNA-dependent RNA polymerase [Soybean dwarf virus]
Length = 894
Score = 211 bits (537), Expect = 6e-61
Identities = 109/151 (72%), Positives = 123/151 (81%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
I+ LSQF+LGL Y PNPSLHNALVAVERRVFTVGKG+EIVLP + GIF NL+YF ++
Sbjct: 398 ISFLSQFTLGLDYQCPNPSLHNALVAVERRVFTVGKGNEIVLPYKNKPGIFSNLDYFRDS 457
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I+N VG +T SP ELA TY SGKR+ Y AV SL + ++DANVTAFLKMEKHLMCK
Sbjct: 458 IVNKVGCPRTHSPEELAATYHSGKRSLYNAAVQSLKKKAVERSDANVTAFLKMEKHLMCK 517
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 518 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 548
>gb|AFP55337.1| RNA-dependent RNA polymerase [Soybean dwarf virus]
gb|AFP55341.1| RNA-dependent RNA polymerase [Soybean dwarf virus]
Length = 894
Score = 211 bits (537), Expect = 6e-61
Identities = 109/151 (72%), Positives = 123/151 (81%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
I+ LSQF+LGL Y PNPSLHNALVAVERRVFTVGKG+EIVLP + GIF NL+YF ++
Sbjct: 398 ISFLSQFTLGLDYQCPNPSLHNALVAVERRVFTVGKGNEIVLPYKNKPGIFSNLDYFRDS 457
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I+N VG +T SP ELA TY SGKR+ Y AV SL + ++DANVTAFLKMEKHLMCK
Sbjct: 458 IVNKVGCPRTHSPEELAATYHSGKRSLYNAAVQSLKKKAVERSDANVTAFLKMEKHLMCK 517
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 518 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 548
>gb|AFP55333.1| RNA-dependent RNA polymerase [Soybean dwarf virus]
Length = 894
Score = 211 bits (537), Expect = 6e-61
Identities = 109/151 (72%), Positives = 123/151 (81%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
I+ LSQF+LGL Y PNPSLHNALVAVERRVFTVGKG+EIVLP + GIF NL+YF ++
Sbjct: 398 ISFLSQFTLGLDYQCPNPSLHNALVAVERRVFTVGKGNEIVLPYKNKPGIFSNLDYFRDS 457
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I+N VG +T SP ELA TY SGKR+ Y AV SL + ++DANVTAFLKMEKHLMCK
Sbjct: 458 IVNKVGCPRTHSPEELAATYHSGKRSLYNAAVQSLKKKAVERSDANVTAFLKMEKHLMCK 517
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 518 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 548
>gb|AFP55353.1| RNA-dependent RNA polymerase [Soybean dwarf virus]
Length = 894
Score = 211 bits (536), Expect = 8e-61
Identities = 108/151 (71%), Positives = 123/151 (81%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
I+ LSQF+LGL Y PNPSLHNALVAVERRVFTVGKG+E+VLP + GIF NL+YF ++
Sbjct: 398 ISFLSQFTLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVLPYKNKPGIFSNLDYFRDS 457
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I+N VG +T SP ELA TY SGKR+ Y AV SL + ++DANVTAFLKMEKHLMCK
Sbjct: 458 IVNKVGCPRTHSPEELAATYHSGKRSLYNAAVQSLKKKAVERSDANVTAFLKMEKHLMCK 517
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 518 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 548
>ref|NP_150431.3| replicase [Soybean dwarf virus]
Length = 894
Score = 207 bits (528), Expect = 1e-59
Identities = 107/151 (70%), Positives = 122/151 (80%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
I+ LSQF+LGL Y PNPSLHNALVAVERRVFTVGKG+E+VLP + GIF NLNYF ++
Sbjct: 398 ISFLSQFTLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVLPYKNKPGIFTNLNYFRDS 457
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I+N VG +T +P ELA TY SGKR+ Y AV SL + ++DANVTAFLKMEKHLM K
Sbjct: 458 IVNKVGCPRTHTPEELAATYHSGKRSLYNAAVQSLKKKAVERSDANVTAFLKMEKHLMSK 517
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKFNEKK MH
Sbjct: 518 KIAPRLICPRNKRYNVELGRRLKFNEKKFMH 548
>ref|YP_009316228.1| P1-P2 polyprotein [Cherry associated luteovirus]
gb|APA23016.1| P1-P2 polyprotein [Cherry associated luteovirus]
Length = 890
Score = 201 bits (510), Expect = 4e-57
Identities = 106/151 (70%), Positives = 115/151 (76%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
IN LSQFSLGL + VPNPSLHNALVAVERRVFTVGKG +++LP SP IF L YF +A
Sbjct: 401 INYLSQFSLGLDFRVPNPSLHNALVAVERRVFTVGKGEDVILPFSPLPRIFGKLAYFRDA 460
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
II VG+ KT SPM LA+TY S KR YI AV SL P D+ VTAFLKMEKH +CK
Sbjct: 461 IIKEVGFCKTHSPMALAMTYQSQKRTQYIHAVLSLRRSPVQVKDSFVTAFLKMEKHWLCK 520
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
IAPRLICPRSKRYNV LGRRLKF EKK MH
Sbjct: 521 DIAPRLICPRSKRYNVELGRRLKFAEKKFMH 551
>ref|NP_563609.1| RNA-dependent RNA polymerase P1-P2 fusion [Bean leafroll virus]
gb|AAL66234.1|AF441393_2 RNA-dependent RNA polymerase P1-P2 fusion [Bean leafroll virus]
Length = 901
Score = 199 bits (507), Expect = 1e-56
Identities = 102/151 (67%), Positives = 119/151 (78%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
IN LSQF+LGL Y PNPSLHNALVAVERRVFTVGKG+E+V P SP G F +NYF +A
Sbjct: 405 INFLSQFTLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVRPYSPLQGQFEKMNYFRDA 464
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I+ VG KT++P +LA T+ SGKR+ Y AV SL + + D+ VTAFLKMEKH+MCK
Sbjct: 465 IVKDVGCPKTYTPEQLAATFKSGKRSLYNTAVLSLKRKAVEKQDSFVTAFLKMEKHMMCK 524
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKF+EKK MH
Sbjct: 525 KIAPRLICPRNKRYNVELGRRLKFSEKKFMH 555
>gb|ALX34940.1| RNA-dependent RNA polymerase P1-P2 fusion [Bean leafroll virus]
Length = 901
Score = 199 bits (506), Expect = 1e-56
Identities = 102/151 (67%), Positives = 119/151 (78%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
IN LSQF+LGL Y PNPSLHNALVAVERRVFTVGKG+E+V P SP G F +NYF +A
Sbjct: 405 INFLSQFTLGLDYQCPNPSLHNALVAVERRVFTVGKGNEVVRPYSPLRGQFEKMNYFRDA 464
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
I+ VG KT++P +LA T+ SGKR+ Y AV SL + + D+ VTAFLKMEKH+MCK
Sbjct: 465 IVKDVGCPKTYTPEQLASTFKSGKRSLYNTAVLSLKRKAVEKQDSFVTAFLKMEKHMMCK 524
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
KIAPRLICPR+KRYNV LGRRLKF+EKK MH
Sbjct: 525 KIAPRLICPRNKRYNVELGRRLKFSEKKFMH 555
>ref|YP_009380510.1| RNA dependent RNA polymerase P1-P2 fusion [Peach associated
luteovirus]
gb|ARV85981.1| RNA dependent RNA polymerase P1-P2 fusion [Peach associated
luteovirus]
Length = 890
Score = 197 bits (501), Expect = 7e-56
Identities = 103/151 (68%), Positives = 115/151 (76%)
Frame = +3
Query: 6 INNLSQFSLGLRYGVPNPSLHNALVAVERRVFTVGKGSEIVLPPSPQAGIFMNLNYFSEA 185
I+ LSQFSLGL + VPNPSLHNALVAVERRVFTVGKG+++VLP P GIF L YF ++
Sbjct: 401 ISYLSQFSLGLDFRVPNPSLHNALVAVERRVFTVGKGTDVVLPLVPSHGIFNKLAYFRDS 460
Query: 186 IINLVGYAKTFSPMELALTYTSGKRNAYIKAVASLLTRPPCQNDANVTAFLKMEKHLMCK 365
II VG+ K SPM LA+TY + KR YI AV SL P D+ VTAFLKMEKH +CK
Sbjct: 461 IIKEVGFCKVHSPMALAMTYQAQKRTQYIHAVLSLRRSPVQVKDSFVTAFLKMEKHWLCK 520
Query: 366 KIAPRLICPRSKRYNVVLGRRLKFNEKKVMH 458
IAPRLICPRSKRYNV LGRRLKF EKK MH
Sbjct: 521 DIAPRLICPRSKRYNVELGRRLKFAEKKFMH 551