BLASTX nr result
ID: Ophiopogon27_contig00029032
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00029032
(888 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020261206.1| retinoblastoma-related protein isoform X1 [A... 82 1e-13
ref|XP_020261207.1| retinoblastoma-related protein isoform X2 [A... 81 2e-13
gb|PPR91301.1| hypothetical protein GOBAR_AA29382 [Gossypium bar... 64 2e-07
ref|XP_016686249.1| PREDICTED: retinoblastoma-related protein-li... 63 2e-07
ref|XP_016686248.1| PREDICTED: retinoblastoma-related protein-li... 63 2e-07
ref|XP_016686247.1| PREDICTED: retinoblastoma-related protein-li... 63 2e-07
>ref|XP_020261206.1| retinoblastoma-related protein isoform X1 [Asparagus officinalis]
gb|ONK72119.1| uncharacterized protein A4U43_C04F15940 [Asparagus officinalis]
Length = 1002
Score = 82.0 bits (201), Expect = 1e-13
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 28/144 (19%)
Frame = -2
Query: 455 D*NEDPHTLEKHYSESMNVLVERHSFLSPVKEHLLGSSGLILKLPPLHSVFAR------- 297
D N DP T ++H SES +VLVER++F SPVKE LL +SGL +KLPPL S FA
Sbjct: 653 DQNGDPQTPKRHCSESNSVLVERNTFTSPVKERLLSASGLKMKLPPLQSAFASPTRPNPA 712
Query: 296 -------------L*SWLLSESEVYLKGCN--------YLSQVWSVSTVSSNEFLANALY 180
S ++ + + ++ + L +++S+ L+
Sbjct: 713 AGGETCAETGINIFFSKIVKLAAIRIRSLSERLQLSQQILERIYSL----IQRILSQRTA 768
Query: 179 FFFNRHIDQLILCSLYVVAKIKEL 108
FFNRHIDQLILC Y VAKI +L
Sbjct: 769 LFFNRHIDQLILCCFYGVAKISQL 792
>ref|XP_020261207.1| retinoblastoma-related protein isoform X2 [Asparagus officinalis]
Length = 857
Score = 81.3 bits (199), Expect = 2e-13
Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 28/142 (19%)
Frame = -2
Query: 449 NEDPHTLEKHYSESMNVLVERHSFLSPVKEHLLGSSGLILKLPPLHSVFAR--------- 297
N DP T ++H SES +VLVER++F SPVKE LL +SGL +KLPPL S FA
Sbjct: 510 NGDPQTPKRHCSESNSVLVERNTFTSPVKERLLSASGLKMKLPPLQSAFASPTRPNPAAG 569
Query: 296 -----------L*SWLLSESEVYLKGCN--------YLSQVWSVSTVSSNEFLANALYFF 174
S ++ + + ++ + L +++S+ L+ F
Sbjct: 570 GETCAETGINIFFSKIVKLAAIRIRSLSERLQLSQQILERIYSL----IQRILSQRTALF 625
Query: 173 FNRHIDQLILCSLYVVAKIKEL 108
FNRHIDQLILC Y VAKI +L
Sbjct: 626 FNRHIDQLILCCFYGVAKISQL 647
>gb|PPR91301.1| hypothetical protein GOBAR_AA29382 [Gossypium barbadense]
Length = 1317
Score = 63.5 bits (153), Expect = 2e-07
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Frame = -2
Query: 449 NEDPHTLEKHYSESMNVLVERHSFLSPVKEHLLGSSGLILKLPPLHSVFARL*------- 291
N D + ++ ++ +VLVER+SF SP K+ LL S L + PL SVFA
Sbjct: 735 NGDVRSPKRQCTDYRSVLVERNSFTSPAKDRLLAFSNL--RKAPLQSVFASPTRPNPVGG 792
Query: 290 --SWLLSESEVYLKGCNYLSQVW---SVSTVSSNEFLANALYF------------FFNRH 162
+ + ++ N L+ VW V + ++ + ++YF FFN H
Sbjct: 793 GETCAETGINIFFSKINKLAAVWINGMVERLQLSQEIRESVYFLFQQILSQRTSLFFNHH 852
Query: 161 IDQLILCSLYVVAKIKELK 105
IDQ+ILC LYVVAK+ +L+
Sbjct: 853 IDQIILCCLYVVAKLSQLE 871
>ref|XP_016686249.1| PREDICTED: retinoblastoma-related protein-like isoform X3 [Gossypium
hirsutum]
Length = 983
Score = 63.2 bits (152), Expect = 2e-07
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Frame = -2
Query: 449 NEDPHTLEKHYSESMNVLVERHSFLSPVKEHLLGSSGLILKLPPLHSVFARL*------- 291
N D + ++ ++ +VLVER+SF SP K+ LL S L + PL SVFA
Sbjct: 636 NGDVRSPKRQCTDYRSVLVERNSFTSPAKDRLLAFSDL--RKAPLQSVFASPTRPNPVGG 693
Query: 290 --SWLLSESEVYLKGCNYLSQVW---SVSTVSSNEFLANALYF------------FFNRH 162
+ + ++ N L+ VW V + ++ + ++YF FFN H
Sbjct: 694 GETCAETGINIFFSKINKLAAVWINGMVERLQLSQEIRESVYFLFQQILSQRTSLFFNHH 753
Query: 161 IDQLILCSLYVVAKIKELK 105
IDQ+ILC LYVVAK+ +L+
Sbjct: 754 IDQIILCCLYVVAKLSQLE 772
>ref|XP_016686248.1| PREDICTED: retinoblastoma-related protein-like isoform X2 [Gossypium
hirsutum]
Length = 998
Score = 63.2 bits (152), Expect = 2e-07
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Frame = -2
Query: 449 NEDPHTLEKHYSESMNVLVERHSFLSPVKEHLLGSSGLILKLPPLHSVFARL*------- 291
N D + ++ ++ +VLVER+SF SP K+ LL S L + PL SVFA
Sbjct: 651 NGDVRSPKRQCTDYRSVLVERNSFTSPAKDRLLAFSDL--RKAPLQSVFASPTRPNPVGG 708
Query: 290 --SWLLSESEVYLKGCNYLSQVW---SVSTVSSNEFLANALYF------------FFNRH 162
+ + ++ N L+ VW V + ++ + ++YF FFN H
Sbjct: 709 GETCAETGINIFFSKINKLAAVWINGMVERLQLSQEIRESVYFLFQQILSQRTSLFFNHH 768
Query: 161 IDQLILCSLYVVAKIKELK 105
IDQ+ILC LYVVAK+ +L+
Sbjct: 769 IDQIILCCLYVVAKLSQLE 787
>ref|XP_016686247.1| PREDICTED: retinoblastoma-related protein-like isoform X1 [Gossypium
hirsutum]
Length = 1006
Score = 63.2 bits (152), Expect = 2e-07
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Frame = -2
Query: 449 NEDPHTLEKHYSESMNVLVERHSFLSPVKEHLLGSSGLILKLPPLHSVFARL*------- 291
N D + ++ ++ +VLVER+SF SP K+ LL S L + PL SVFA
Sbjct: 659 NGDVRSPKRQCTDYRSVLVERNSFTSPAKDRLLAFSDL--RKAPLQSVFASPTRPNPVGG 716
Query: 290 --SWLLSESEVYLKGCNYLSQVW---SVSTVSSNEFLANALYF------------FFNRH 162
+ + ++ N L+ VW V + ++ + ++YF FFN H
Sbjct: 717 GETCAETGINIFFSKINKLAAVWINGMVERLQLSQEIRESVYFLFQQILSQRTSLFFNHH 776
Query: 161 IDQLILCSLYVVAKIKELK 105
IDQ+ILC LYVVAK+ +L+
Sbjct: 777 IDQIILCCLYVVAKLSQLE 795