BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00028796
         (585 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017702519.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_010905781.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-06

>ref|XP_017702519.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Phoenix dactylifera]
          Length = 849

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
 Frame = -1

Query: 492 KTQNSKPRIETETKGARKTK---------KDL--------NKERKLCSSPLINAHSYLHL 364
           +T N+K   ET+ +GA +T          + L        N++R+L S   I   SY  L
Sbjct: 19  QTGNAKSTRETKLEGAEETNGVSKKVRGGQSLRRAFELFSNEQRELISH--IKPSSYGTL 76

Query: 363 LQSSPGNSSEEPLKGCLQLHAHLIKTDHSQTXXXXXXXXXXXXXXLRFKRLDFACRMLET 184
           L++    S E  L+G LQ+H  ++K   S                ++ + LDFA R+L+T
Sbjct: 77  LRAC---SKEGFLEGGLQVHGRMLK---SGLGSDPFLQSSLLSFYVKCESLDFARRVLDT 130

Query: 183 FTNLQTTLVSWNTIITTYCRYGXXXXXXXXXXXLQKSGLPPDQFTLSLLIGAMGERCELS 4
            + +++ LV WN+IIT Y R G            Q  G+ PD FT S+ I   G++ E S
Sbjct: 131 -SKVRSNLVCWNSIITMYYRIGLVEEALSMFLESQNYGIEPDAFTFSVAIRVAGQQREPS 189

Query: 3   L 1
           L
Sbjct: 190 L 190


>ref|XP_010905781.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Elaeis guineensis]
          Length = 851

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 57/187 (30%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
 Frame = -1

Query: 498 PP--KTQNSKPRIETETKGARKTKKDL-------------------NKERKLCSSPLINA 382
           PP  +T N+K   ET+ KGA +    +                   N +R L S   I  
Sbjct: 15  PPLLETGNTKSTRETKLKGAEEMTNGVPKKVCGDQSLRRRAFELFSNDQRALSSD--IKP 72

Query: 381 HSYLHLLQSSPGNSSEEPLKGCLQLHAHLIKTDHSQTXXXXXXXXXXXXXXLRFKRLDFA 202
            SY  LL++    S E  L+G LQ+HA +IK                     + + LDFA
Sbjct: 73  SSYGALLRAC---SKERFLEGGLQVHARMIKRGLESDQFLQSSLLSLYV---KCESLDFA 126

Query: 201 CRMLETFTNLQTTLVSWNTIITTYCRYGXXXXXXXXXXXLQKSGLPPDQFTLSLLIGAMG 22
            R+ +T + L T L+  N+IIT Y R G            Q  G+ PD FT S++I   G
Sbjct: 127 RRVFDT-SKLGTNLICCNSIITMYYRSGLVEEALSVFLESQSHGIEPDAFTFSVVIRVAG 185

Query: 21  ERCELSL 1
           ++ E SL
Sbjct: 186 QQREPSL 192