BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00028708
         (924 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010923721.1| PREDICTED: RNA polymerase II subunit 5-media...    64   8e-08
ref|XP_008813687.1| PREDICTED: unconventional prefoldin RPB5 int...    59   5e-06
ref|XP_008813686.1| PREDICTED: RNA polymerase II subunit 5-media...    59   5e-06
ref|XP_019702738.1| PREDICTED: uncharacterized protein LOC105035...    55   6e-06

>ref|XP_010923721.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           [Elaeis guineensis]
          Length = 346

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = -1

Query: 777 ISDSNSTFLASDGSIKSSMASSHVKHKPISPPDPKENLHNSSDLKLKDTSDKVTSETDIM 598
           I++ +  F     S +S     H   K   PP+PKENLH +S LKL+D+S+    +T  +
Sbjct: 235 IANLSMQFSGKAASFQSDREQPHSIEKSPLPPEPKENLHQASVLKLEDSSENSARQTFKI 294

Query: 597 NFSGRKAFTGSVIEHTH 547
             S R+AFTGS++EH+H
Sbjct: 295 GSSSRRAFTGSIVEHSH 311


>ref|XP_008813687.1| PREDICTED: unconventional prefoldin RPB5 interactor isoform X2
           [Phoenix dactylifera]
          Length = 343

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 29/77 (37%), Positives = 43/77 (55%)
 Frame = -1

Query: 777 ISDSNSTFLASDGSIKSSMASSHVKHKPISPPDPKENLHNSSDLKLKDTSDKVTSETDIM 598
           I+D +  F    GS +          K   PP+ KENLH +S  KL+D+S+   S+T  +
Sbjct: 232 IADLSMQFSTKAGSFQCDKEQPDSMQKSPLPPERKENLHKASIPKLEDSSENSASQTSKI 291

Query: 597 NFSGRKAFTGSVIEHTH 547
             S  +AFTGS++EH+H
Sbjct: 292 GSSSHRAFTGSIVEHSH 308


>ref|XP_008813686.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X1 [Phoenix dactylifera]
          Length = 346

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 29/77 (37%), Positives = 43/77 (55%)
 Frame = -1

Query: 777 ISDSNSTFLASDGSIKSSMASSHVKHKPISPPDPKENLHNSSDLKLKDTSDKVTSETDIM 598
           I+D +  F    GS +          K   PP+ KENLH +S  KL+D+S+   S+T  +
Sbjct: 235 IADLSMQFSTKAGSFQCDKEQPDSMQKSPLPPERKENLHKASIPKLEDSSENSASQTSKI 294

Query: 597 NFSGRKAFTGSVIEHTH 547
             S  +AFTGS++EH+H
Sbjct: 295 GSSSHRAFTGSIVEHSH 311


>ref|XP_019702738.1| PREDICTED: uncharacterized protein LOC105035017 [Elaeis guineensis]
          Length = 115

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = -1

Query: 738 SIKSSMASSH-VKHKPISPPDPKENLHNSSDLKLKDTSDKVTSETDIMNFSGRKAFTGSV 562
           S +S     H V++ P+ P +PKENLH +S LKL+D+S+    +   +  S R+AFTG +
Sbjct: 5   SFQSDKEQPHRVQNSPL-PSEPKENLHQASVLKLEDSSENYARQASKIGSSSRRAFTGFI 63

Query: 561 IEHTH 547
           +EH+H
Sbjct: 64  VEHSH 68