BLASTX nr result

ID: Ophiopogon27_contig00028690 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00028690
         (804 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020257734.1| helicase-like transcription factor CHR28 iso...   202   2e-55
ref|XP_020257733.1| helicase-like transcription factor CHR28 iso...   202   2e-55

>ref|XP_020257734.1| helicase-like transcription factor CHR28 isoform X2 [Asparagus
           officinalis]
          Length = 1242

 Score =  202 bits (513), Expect = 2e-55
 Identities = 114/215 (53%), Positives = 135/215 (62%), Gaps = 1/215 (0%)
 Frame = +2

Query: 161 MLSADAMDNSSSPMLFDSDG-MYDDDNLNNFSIDIGDLYAILDEDXXXXXXXXXFAATIE 337
           M+SADA  N    MLFDSDG + DDD LN+FS+DIGD++AILDED            T E
Sbjct: 1   MMSADAAGNPQGTMLFDSDGAINDDDYLNDFSMDIGDVFAILDEDPQQPNLN----VTAE 56

Query: 338 GFQLVGQAPSQFIPEKKSQTESTTDLEDSRERGCSQWNLEASGSAGVSGLGFHSESGCNH 517
           GFQ    APSQF  E+KSQ ESTT L + RER   QW+LE +GS    G   H+ES  + 
Sbjct: 57  GFQHGELAPSQFDHEQKSQAESTTGLTEFRERDYFQWSLEDAGSQRSMGFDIHNESERDL 116

Query: 518 NGIADGGGFHALPNFDTSNFCPTPSQNSSNGLRPSCPNNNYQMAPFGGSSGRFLTVNFDQ 697
           NG+   GG HAL  FD ++F P P QNSS  LR   P ++Y    FGGSSG  LT N DQ
Sbjct: 117 NGVNVKGGLHALSRFDQNSFFPVPQQNSSYVLRSLSPYSDYPRTAFGGSSGSSLTFNSDQ 176

Query: 698 PLLQTNMKEYSVPGEGMNGAGFIPFPVATENDFYF 802
             LQTNM+E SV GEG+ G G++ FPVA  N FYF
Sbjct: 177 RQLQTNMQERSVQGEGLRGEGYVSFPVAAGNGFYF 211


>ref|XP_020257733.1| helicase-like transcription factor CHR28 isoform X1 [Asparagus
           officinalis]
 gb|ONK75930.1| uncharacterized protein A4U43_C03F22070 [Asparagus officinalis]
          Length = 1339

 Score =  202 bits (513), Expect = 2e-55
 Identities = 114/215 (53%), Positives = 135/215 (62%), Gaps = 1/215 (0%)
 Frame = +2

Query: 161 MLSADAMDNSSSPMLFDSDG-MYDDDNLNNFSIDIGDLYAILDEDXXXXXXXXXFAATIE 337
           M+SADA  N    MLFDSDG + DDD LN+FS+DIGD++AILDED            T E
Sbjct: 1   MMSADAAGNPQGTMLFDSDGAINDDDYLNDFSMDIGDVFAILDEDPQQPNLN----VTAE 56

Query: 338 GFQLVGQAPSQFIPEKKSQTESTTDLEDSRERGCSQWNLEASGSAGVSGLGFHSESGCNH 517
           GFQ    APSQF  E+KSQ ESTT L + RER   QW+LE +GS    G   H+ES  + 
Sbjct: 57  GFQHGELAPSQFDHEQKSQAESTTGLTEFRERDYFQWSLEDAGSQRSMGFDIHNESERDL 116

Query: 518 NGIADGGGFHALPNFDTSNFCPTPSQNSSNGLRPSCPNNNYQMAPFGGSSGRFLTVNFDQ 697
           NG+   GG HAL  FD ++F P P QNSS  LR   P ++Y    FGGSSG  LT N DQ
Sbjct: 117 NGVNVKGGLHALSRFDQNSFFPVPQQNSSYVLRSLSPYSDYPRTAFGGSSGSSLTFNSDQ 176

Query: 698 PLLQTNMKEYSVPGEGMNGAGFIPFPVATENDFYF 802
             LQTNM+E SV GEG+ G G++ FPVA  N FYF
Sbjct: 177 RQLQTNMQERSVQGEGLRGEGYVSFPVAAGNGFYF 211


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