BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00028448
         (721 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82075.1| hypothetical protein VITISV_016661 [Vitis vinifera]    81   1e-13
gb|KYP48169.1| Retrovirus-related Pol polyprotein from transposo...    78   1e-13
emb|CAN60648.1| hypothetical protein VITISV_033947 [Vitis vinifera]    74   2e-13
emb|CAN70260.1| hypothetical protein VITISV_002223 [Vitis vinifera]    80   2e-13
emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera]    78   3e-13
emb|CAN65005.1| hypothetical protein VITISV_023491 [Vitis vinifera]    79   3e-13
gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposo...    75   6e-13
ref|XP_020218720.1| uncharacterized protein LOC109801952 isoform...    75   6e-13
gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposo...    76   8e-13
gb|KYP71833.1| Retrovirus-related Pol polyprotein from transposo...    76   8e-13
gb|KOM38790.1| hypothetical protein LR48_Vigan03g217200 [Vigna a...    76   1e-12
gb|AFN88207.1| integrase core domain containing protein [Phaseol...    74   2e-12
gb|KYP76941.1| Retrovirus-related Pol polyprotein from transposo...    74   2e-12
gb|KYP37955.1| Retrovirus-related Pol polyprotein from transposo...    74   3e-12
emb|CAN62317.1| hypothetical protein VITISV_026526 [Vitis vinifera]    77   3e-12
emb|CAN62328.1| hypothetical protein VITISV_029806 [Vitis vinifera]    77   3e-12
gb|KYP51543.1| Retrovirus-related Pol polyprotein from transposo...    73   3e-12
gb|KYP45103.1| Retrovirus-related Pol polyprotein from transposo...    71   3e-12
gb|KYP51682.1| Retrovirus-related Pol polyprotein from transposo...    73   5e-12
gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposo...    70   6e-12

>emb|CAN82075.1| hypothetical protein VITISV_016661 [Vitis vinifera]
          Length = 960

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 60/179 (33%), Positives = 75/179 (41%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGNISHV-GVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN  LF+   +T   P V  A+G+ +   G+                             
Sbjct: 373 GNKDLFSSITTTSALPTVTLANGSQTVAKGIGLALPLPSLPLTFVLYTPECPFNLISISK 432

Query: 373 XTRALNCSITF---LIVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            TR LNCSITF    +   +  T + IGIGCE  GLY+F                  H  
Sbjct: 433 LTRTLNCSITFSDKFVTLQDRSTGKTIGIGCESQGLYHFTSDSSAAVCISTDAPLLIHNR 492

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL    K+       S L CES  L KH   S+P R++NRA S F+ VH D WGP
Sbjct: 493 LGHPSLSKFQKMVPRFSTLSSLPCESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGP 551


>gb|KYP48169.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 224

 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 47/118 (39%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
 Frame = +1

Query: 376 TRALNCSITFLI---VF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCHL 546
           T++LNCS+TF +   V  E GT R+IG G E  GLYYF+                H   L
Sbjct: 58  TKSLNCSVTFNVESFVIQERGTGRKIGAGHESSGLYYFETQPPVSCVVVLSPTLLHD-RL 116

Query: 547 GHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           GHPSL  +  +   + +   L CES  L KH   S+P + D R  S+F  +HFD WGP
Sbjct: 117 GHPSLSKLKLLVPSLKNLEELGCESCQLGKHVRPSFPKQTDTRCNSIFTTIHFDIWGP 174


>emb|CAN60648.1| hypothetical protein VITISV_033947 [Vitis vinifera]
          Length = 1257

 Score = 74.3 bits (181), Expect(2) = 2e-13
 Identities = 60/179 (33%), Positives = 75/179 (41%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGNISHV-GVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN   F+ F  T   PLV  ADG+   + G   V                          
Sbjct: 343 GNHKTFSTFR-THSAPLVTVADGSTYEIKGSGTVKPTSSITLSSVLNLPNLAFNLISVGK 401

Query: 373 XTRALNCSITFL---IVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            T+ LNCS++F     VF +L T +  G G    GLY  D               + HC 
Sbjct: 402 LTKNLNCSVSFSPYHCVFQDLMTKQTFGKGHVSDGLYILDDTASPV---------EAHCR 452

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL  + K+    D    L+CES    KHH SS   R++ RA SLF+ VH D WGP
Sbjct: 453 LGHPSLPVLKKLCPQFDTLPSLDCESCHFAKHHHSSLGPRINKRAESLFELVHSDVWGP 511



 Score = 30.0 bits (66), Expect(2) = 2e-13
 Identities = 15/23 (65%), Positives = 15/23 (65%)
 Frame = +2

Query: 128 TCHASSSLTTWIIDSGIFDHMMG 196
           TC  SSS   WIIDSG  DHM G
Sbjct: 322 TCLVSSS-NKWIIDSGATDHMTG 343


>emb|CAN70260.1| hypothetical protein VITISV_002223 [Vitis vinifera]
          Length = 956

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 60/179 (33%), Positives = 75/179 (41%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGNISHV-GVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN  LF+   +T   P VI A+G+ +   G+                             
Sbjct: 347 GNKDLFSSITTTSALPNVILANGSQTVAKGIGLALPLSSLPLTSVLYTPECPFNLISISK 406

Query: 373 XTRALNCSITF---LIVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            TR LNCSITF    +   +  T + IGIGCE  GLY+                   H  
Sbjct: 407 ITRTLNCSITFSDKFVTLQDRSTGKTIGIGCESQGLYHLTSDSSPAVCISTDAPLLIHNR 466

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL    K+       S L CES  L KH   S+P R++NRA S F+ VH D WGP
Sbjct: 467 LGHPSLSKFXKMVPRFSTLSSLPCESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGP 525


>emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera]
          Length = 1248

 Score = 78.2 bits (191), Expect(2) = 3e-13
 Identities = 60/179 (33%), Positives = 75/179 (41%), Gaps = 5/179 (2%)
 Frame = +1

Query: 199 NPSLFTEFNSTLYFPLVIFADGNISHV-GVCNVDXXXXXXXXXXXXXXXXXXXXXXXXXX 375
           NP  F+ F S L    V  ADG+ S+V G   V                           
Sbjct: 303 NPKTFSSFRSHLASSPVTIADGSTSNVVGSRTVKPTSSITLSSVLSLPKLAFNLISVSKL 362

Query: 376 TRALNCSITFLI---VF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXX-DHHCH 543
           T+ LNC I+F +   +F +L T + IG G  + GLY  D                  HC 
Sbjct: 363 TKDLNCCISFFLDHCLFQDLMTKQIIGKGHVYDGLYILDAWVPRSVACSSIASSVKAHCR 422

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL  + K+           CES    KHH SS   RV+ RA S+F+ VHFD WGP
Sbjct: 423 LGHPSLPVLKKLCPQFHSLPSFNCESCHFAKHHYSSLSPRVNKRAESIFELVHFDVWGP 481



 Score = 25.4 bits (54), Expect(2) = 3e-13
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 128 TCHASSSLTTWIIDSGIFDHM 190
           TC  SSS   W+IDSG  +HM
Sbjct: 281 TCLISSS-NKWVIDSGATNHM 300


>emb|CAN65005.1| hypothetical protein VITISV_023491 [Vitis vinifera]
          Length = 1058

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 49/119 (41%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
 Frame = +1

Query: 376 TRALNCSITFL---IVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXX-DHHCH 543
           T+ LNCS++F     VF +L T +  G G    GLY  D                + HC 
Sbjct: 392 TKNLNCSVSFFPDHCVFQDLMTKQTFGKGHVSDGLYILDEWVPRPVACVSTAFPVEAHCR 451

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL  + K+    D+   L+CES    KHH SS   R++ RA SLFK VHFD WGP
Sbjct: 452 LGHPSLPVLKKLCPQFDNLPSLDCESCHFAKHHRSSLGPRINKRAESLFKLVHFDVWGP 510


>gb|KYP63559.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1378

 Score = 75.5 bits (184), Expect(2) = 6e-13
 Identities = 58/179 (32%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGN-ISHVGVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN SLF+  +       +  A+G+ ++  GV  V                          
Sbjct: 335 GNNSLFSSISLPKVPHFITLANGSKVASQGVGQVSLTPSLNLKSVLFVPKCAFNLISLSK 394

Query: 373 XTRALNCSITF---LIVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            T++LNCS+TF     V  E GT R IG G E  GLYYF+                H   
Sbjct: 395 LTKSLNCSVTFDANSFVIQERGTGRLIGGGHESRGLYYFETSPSVSCFASSTPKLLHD-R 453

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHP L  + K+   ++    LECES  L KH  SS+P R + R  S F  +H D WGP
Sbjct: 454 LGHPHLTKLKKMVPSLNKLQALECESCQLGKHVRSSFPKRTETRCNSAFSIIHSDIWGP 512



 Score = 26.9 bits (58), Expect(2) = 6e-13
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 137 ASSSLTTWIIDSGIFDHMMGGTQV 208
           ++ S   WIIDSG  DHM G   +
Sbjct: 316 STESQGPWIIDSGASDHMSGNNSL 339


>ref|XP_020218720.1| uncharacterized protein LOC109801952 isoform X2 [Cajanus cajan]
          Length = 839

 Score = 75.5 bits (184), Expect(2) = 6e-13
 Identities = 58/179 (32%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGN-ISHVGVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN SLF+  +       +  A+G+ ++  GV  V                          
Sbjct: 329 GNNSLFSSISLPKVPHFITLANGSKVASQGVGQVSLTPSLNLKSVLFVPKCAFNLISLSK 388

Query: 373 XTRALNCSITF---LIVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            T++LNCS+TF     V  E GT R IG G E  GLYYF+                H   
Sbjct: 389 LTKSLNCSVTFDANSFVIQERGTGRLIGGGHESRGLYYFETSPSVSCFASSTPKLLHD-R 447

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHP L  + K+   ++    LECES  L KH  SS+P R + R  S F  +H D WGP
Sbjct: 448 LGHPHLTKLKKMVPSLNKLQALECESCQLGKHVRSSFPKRTETRCNSAFSIIHSDIWGP 506



 Score = 26.9 bits (58), Expect(2) = 6e-13
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 137 ASSSLTTWIIDSGIFDHMMGGTQV 208
           ++ S   WIIDSG  DHM G   +
Sbjct: 310 STESQGPWIIDSGASDHMSGNNSL 333


>gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1371

 Score = 75.9 bits (185), Expect(2) = 8e-13
 Identities = 58/179 (32%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGN-ISHVGVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN SLF   +S     L+  ADG+ I+  G+  V                          
Sbjct: 329 GNDSLFLSMSSLKSPHLITLADGSKIAPKGIGQVSLSPMLNLKSVLFVPKCPFNLISLSQ 388

Query: 373 XTRALNCSITF---LIVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            T++LNCS+TF     V  E GT + IG+G E  GLYYF                 H   
Sbjct: 389 LTKSLNCSVTFNAESCVIQERGTGKMIGVGHEFGGLYYFGMQPSVSCVAVLPPKLLHD-R 447

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL  +  +   +     L CES  L KH  SS+P + + R  S+F  +H D WGP
Sbjct: 448 LGHPSLSKLKLLVPSLKTLEELGCESCQLGKHVRSSFPKQTEKRCNSVFTTIHSDIWGP 506



 Score = 26.2 bits (56), Expect(2) = 8e-13
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 140 SSSLTTWIIDSGIFDHMMG 196
           ++S + WIIDSG  DH+ G
Sbjct: 311 TASQSPWIIDSGASDHIAG 329


>gb|KYP71833.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 612

 Score = 75.9 bits (185), Expect(2) = 8e-13
 Identities = 58/179 (32%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGN-ISHVGVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN SLF   +S     L+  ADG+ I+  G+  V                          
Sbjct: 205 GNDSLFLSMSSLKSPHLITLADGSKIAPKGIGQVSLSPMLNLKSVLFVPKCPFNLISLSQ 264

Query: 373 XTRALNCSITF---LIVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            T++LNCS+TF     V  E GT + IG+G E  GLYYF                 H   
Sbjct: 265 LTKSLNCSVTFNAESCVIQERGTGKMIGVGHEFGGLYYFGMQPSVSCVAVLPPKLLHD-R 323

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL  +  +   +     L CES  L KH  SS+P + + R  S+F  +H D WGP
Sbjct: 324 LGHPSLSKLKLLVPSLKTLEELGCESCQLGKHVRSSFPKQTEKRCNSVFTTIHSDIWGP 382



 Score = 26.2 bits (56), Expect(2) = 8e-13
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 140 SSSLTTWIIDSGIFDHMMG 196
           ++S + WIIDSG  DH+ G
Sbjct: 187 TASQSPWIIDSGASDHIAG 205


>gb|KOM38790.1| hypothetical protein LR48_Vigan03g217200 [Vigna angularis]
          Length = 1119

 Score = 75.9 bits (185), Expect(2) = 1e-12
 Identities = 58/179 (32%), Positives = 75/179 (41%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGN-ISHVGVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN  LF+   S     LV  A+G+ ++  G+  V                          
Sbjct: 88  GNTRLFSSITSQKDPQLVTIANGSKLTSQGIDKVSLSPSLNLNSILYIPHCPYNLMSVSQ 147

Query: 373 XTRALNCSITFL---IVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            TR+LNCSITF     V  E GT R IG G E  GLY+                  H   
Sbjct: 148 LTRSLNCSITFTATSFVIQEHGTGRRIGEGYESGGLYFLKPTSFVSCISTSSPKILHD-R 206

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHP+L  +  +   + H   L+CES  L KH  SSYP + + R  S+F  +H D WGP
Sbjct: 207 LGHPNLSKLKLMVPSLKHIPVLDCESCQLGKHVRSSYPKKSETRCKSIFSTIHSDIWGP 265



 Score = 25.4 bits (54), Expect(2) = 1e-12
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 155 TWIIDSGIFDHMMGGTQV 208
           +WI+DSG  +H+ G T++
Sbjct: 75  SWILDSGASNHLSGNTRL 92


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score = 73.6 bits (179), Expect(2) = 2e-12
 Identities = 56/179 (31%), Positives = 74/179 (41%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADG-NISHVGVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN S F+  ++T Y P V  A+G  +   GV  ++                         
Sbjct: 369 GNQSFFSSLSTTGYLPSVTMANGYKVPSHGVGTINLFPSLSIDNVLYVPGSPFNLLSISR 428

Query: 373 XTRALNCSITFL---IVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            TR+L+C I+F    +   +  + R IG GCE  GLY                    H  
Sbjct: 429 LTRSLDCVISFTKDSVSLQDRCSGRMIGTGCESHGLYQLQISAHVGAIMDSPSLI--HAR 486

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL  M ++   + + S L CES    KH  SS+P  V  RA S F  VH D WGP
Sbjct: 487 LGHPSLAKMQQLVPSLSNVSSLSCESCQFGKHIRSSFPSSVSQRASSPFALVHSDIWGP 545



 Score = 27.3 bits (59), Expect(2) = 2e-12
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 140 SSSLTTWIIDSGIFDHMMG 196
           S+SL  W++DSG  DH+ G
Sbjct: 351 STSLGPWVLDSGATDHITG 369


>gb|KYP76941.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 441

 Score = 73.6 bits (179), Expect(2) = 2e-12
 Identities = 56/179 (31%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGN-ISHVGVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN SLF+  ++  Y P +   +G+ ++  GV  V                          
Sbjct: 218 GNRSLFSSLSTFAYLPSITMTNGSRVTSHGVGTVHLSPSLSIDNVFYVLESPFNLLSLSR 277

Query: 373 XTRALNCSITFL---IVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            TR+L+C I+F    +   +  + R IG GCE  GLY+                   H  
Sbjct: 278 LTRSLDCLISFTKDSVFLQDRSSGRMIGTGCESHGLYHLRTSAPVGLVADSPSLI--HAQ 335

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL  + ++   +   S L CES  L KH  SS+ L V NRA S F  VH D WGP
Sbjct: 336 LGHPSLVKLQQLVPRLSKLSHLSCESCQLGKHSRSSFSLSVPNRALSPFALVHSDIWGP 394



 Score = 27.3 bits (59), Expect(2) = 2e-12
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 140 SSSLTTWIIDSGIFDHMMG 196
           S+SL  W++DSG  DH+ G
Sbjct: 200 STSLGPWVLDSGATDHISG 218


>gb|KYP37955.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 193

 Score = 73.6 bits (179), Expect = 3e-12
 Identities = 46/118 (38%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
 Frame = +1

Query: 376 TRALNCSITFL---IVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCHL 546
           T++LNC +TF     V  E GT R+IG G E  GLYYF+                H   L
Sbjct: 58  TKSLNCLVTFSAGSFVIQERGTSRKIGAGHESGGLYYFEMQPPVSCVAVLSPKLLHD-RL 116

Query: 547 GHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           GHPSL  +  +   +   + L CES  L KH  SS+P + D R  S+F  +H D WGP
Sbjct: 117 GHPSLSKLKLLVPSLQKLAELGCESCQLGKHVRSSFPKQTDKRCNSIFTTIHSDIWGP 174


>emb|CAN62317.1| hypothetical protein VITISV_026526 [Vitis vinifera]
          Length = 768

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 58/179 (32%), Positives = 74/179 (41%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGNISHV-GVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN  LF+   +T   P V  A+G+ +   G+                             
Sbjct: 282 GNKHLFSSITTTSTLPTVTLANGSQTMAKGIGLTHPLPSLPFHSVLYAPECPFNLISISK 341

Query: 373 XTRALNCSITFL---IVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            TR LNCSITF    ++  +  T + IGIG E  GLY+                   H  
Sbjct: 342 ITRTLNCSITFSNKSVILQDRSTGKTIGIGRESQGLYHLTSPSSPAACISTDAPLLIHSR 401

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL    K+       S L CES  L KH   S+P R++NRA S F+ VH D WGP
Sbjct: 402 LGHPSLSKFQKMVPHFSTLSSLTCESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGP 460


>emb|CAN62328.1| hypothetical protein VITISV_029806 [Vitis vinifera]
          Length = 996

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 59/179 (32%), Positives = 74/179 (41%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGNISHV-GVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN  LF+   +T   P VI A+G+ +   G+                             
Sbjct: 56  GNKDLFSSITTTSALPTVILANGSQTVAKGIGLALPLPSLPLTSVLYTPECPFNLISISK 115

Query: 373 XTRALNCSITF---LIVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            TR LNCSITF    +   +  T + IGIG E  GLY+                   H  
Sbjct: 116 LTRTLNCSITFSDKFVTLQDRSTGKTIGIGRESQGLYHLTSDSSAAVCISTDAPLLIHNR 175

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL    K+       S L CES  L KH   S+P R++NRA S F+ VH D WGP
Sbjct: 176 LGHPSLSKFQKMVPRFSTLSLLPCESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGP 234


>gb|KYP51543.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 439

 Score = 72.8 bits (177), Expect(2) = 3e-12
 Identities = 57/180 (31%), Positives = 76/180 (42%), Gaps = 5/180 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGN--ISHVGVCNVDXXXXXXXXXXXXXXXXXXXXXXXX 369
           GN S F+  +++ Y P +  A+G+   SH GV  V                         
Sbjct: 218 GNRSFFSSLSTSTYLPSITMANGSRATSH-GVGTVHLSPSLSIDNVLNVPESPFNLLPLS 276

Query: 370 XXTRALNCSITFL---IVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHC 540
             TR+L+C I+F    +   +  + R IG GCE  GLY+                   H 
Sbjct: 277 RLTRSLDCLISFTKDSVFLQDRSSGRMIGTGCESHGLYHLRTSAPVGLVADSPSLI--HA 334

Query: 541 HLGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
            LGHPSL  +  +   +   S L CES  L KH  SS+   V NRA S F  VH+D WGP
Sbjct: 335 QLGHPSLAKLQHLVPRLSKLSHLSCESCQLGKHSRSSFSPSVHNRALSPFALVHYDIWGP 394



 Score = 27.3 bits (59), Expect(2) = 3e-12
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 140 SSSLTTWIIDSGIFDHMMG 196
           S+SL  W++DSG  DH+ G
Sbjct: 200 STSLGPWVLDSGATDHIYG 218


>gb|KYP45103.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 326

 Score = 71.2 bits (173), Expect(2) = 3e-12
 Identities = 53/179 (29%), Positives = 73/179 (40%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGN-ISHVGVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN SLF   +S      +   DG+ +   G+  +                          
Sbjct: 77  GNVSLFHSLSSPKTSHHITLVDGSKVQATGIGQISPTPSLPLKSVLLVPGCPFNLISISK 136

Query: 373 XTRALNCSITFL---IVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            TR+LNC+ITF     +  +  T + IG+G E  GLYY                  H   
Sbjct: 137 LTRSLNCAITFTSDSFLIQDRSTGQTIGVGYESHGLYYLQSSTSTICASVESPSLIHR-R 195

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL  + K+   +     LECES  L KH  +S+P  + +RA S F  +H D WGP
Sbjct: 196 LGHPSLNKLKKMVPHLSRLESLECESCQLGKHVRTSFPKSIKSRAVSPFDVIHSDVWGP 254



 Score = 28.9 bits (63), Expect(2) = 3e-12
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 113 TYNPSTCHA-SSSLTTWIIDSGIFDHMMGGTQV 208
           T N + C + S+S+  W++DSG  DH+ G   +
Sbjct: 49  TSNSTVCLSHSTSIGPWVLDSGASDHLTGNVSL 81


>gb|KYP51682.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 221

 Score = 73.2 bits (178), Expect(2) = 5e-12
 Identities = 57/178 (32%), Positives = 75/178 (42%), Gaps = 4/178 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGN-ISHVGVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN SLF   +S     L+  ADG+ I+  G+  V                          
Sbjct: 20  GNDSLFLSMSSLKSPHLITLADGSKIAPKGIGQVSLSPMLNLKSVLFVPNCPFNLISLSQ 79

Query: 373 XTRALNCSITF---LIVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            T++LNC +TF     V  E GT R IG+G E  GLYYF                 H   
Sbjct: 80  LTKSLNCLVTFNAESCVIQERGTGRMIGVGHEFGGLYYFGMQPSASCVVVLPPKLLHD-R 138

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWG 717
           LGHPSL  +  +   +     L CES  L KH  SS+P +++ R  S+F  +H D WG
Sbjct: 139 LGHPSLSKLKLLVPSLKTLEELGCESCQLGKHVRSSFPKQIEKRCNSVFTTIHSDIWG 196



 Score = 26.2 bits (56), Expect(2) = 5e-12
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 140 SSSLTTWIIDSGIFDHMMG 196
           ++S + WIIDSG  DH+ G
Sbjct: 2   TASQSPWIIDSGASDHIAG 20


>gb|KYP58728.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1402

 Score = 70.5 bits (171), Expect(2) = 6e-12
 Identities = 54/179 (30%), Positives = 73/179 (40%), Gaps = 4/179 (2%)
 Frame = +1

Query: 196 GNPSLFTEFNSTLYFPLVIFADGN-ISHVGVCNVDXXXXXXXXXXXXXXXXXXXXXXXXX 372
           GN SLF   +S      +  ADG+ +   G+  +                          
Sbjct: 356 GNVSLFPNLSSPRTPHHITLADGSKVQATGIGQISPLPSLPLKSVLLVPGCPFNLISISK 415

Query: 373 XTRALNCSITFL---IVF*ELGT*REIGIGCEH*GLYYFDXXXXXXXXXXXXXXXDHHCH 543
            TR+LNC ITF     +  +  T + IG G E  GLYY                  H   
Sbjct: 416 LTRSLNCVITFTSDSFLIQDRSTGQTIGAGSESHGLYYLQPSTSTICASIESPGLIHR-R 474

Query: 544 LGHPSLENMVKISFWIDHASFLECESY*LCKHHCSSYPLRVDNRAGSLFKPVHFDAWGP 720
           LGHPSL  + K+   +     LECES  L KH  +S+P  +++RA S F  +H D WGP
Sbjct: 475 LGHPSLNKLKKMVPHLSRLESLECESCQLGKHVRASFPNSINSRAMSPFDVIHSDVWGP 533



 Score = 28.5 bits (62), Expect(2) = 6e-12
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 113 TYNPSTCHA-SSSLTTWIIDSGIFDHMMGGTQV 208
           T N + C + S+S+  W++DSG  DH+ G   +
Sbjct: 328 TGNSTVCLSHSTSIGPWVLDSGASDHLTGNVSL 360