BLASTX nr result
ID: Ophiopogon27_contig00028445
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon27_contig00028445 (828 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo... 86 5e-31 emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 78 2e-27 gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 75 6e-27 emb|CAJ86151.1| H0413E07.4 [Oryza sativa] 75 7e-27 gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 75 2e-26 gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 75 8e-26 gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 75 8e-26 emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 82 1e-25 emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 88 2e-25 gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 81 5e-25 gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum] 90 6e-25 gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 72 2e-24 dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 72 2e-24 gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 70 1e-23 gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 72 2e-23 gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 75 2e-23 gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro... 69 3e-23 emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 75 4e-23 dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] 72 1e-22 gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposo... 81 1e-22 >gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Apostasia shenzhenica] Length = 365 Score = 85.5 bits (210), Expect(2) = 5e-31 Identities = 40/73 (54%), Positives = 51/73 (69%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WFS+Y DGG V+M NN C+ VGIG +I++ G RTLT VRHVPDL+K L Sbjct: 179 MCPFRDWFSTYSIHDGGRVIMGNNSECKSVGIGTIKIKMFDGVIRTLTEVRHVPDLRKGL 238 Query: 738 LSLGALEAQGCKF 776 +SLG L+A GC F Sbjct: 239 ISLGTLDASGCTF 251 Score = 78.2 bits (191), Expect(2) = 5e-31 Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 5/155 (3%) Frame = +2 Query: 125 SLPSSYDHLVTTIMYGK*ILEL*DI*QVF*NNEPMKRANSKEASDLVVRVNKGKPKNKEF 304 SLP SYDHLVTTI+YGK L++ ++ +NE + ++ E+ + ++G+ KNK F Sbjct: 40 SLPKSYDHLVTTILYGKDTLKVEEVNATLLSNEVRNKQSTGESLTVKTSQDRGRSKNK-F 98 Query: 305 G-----KSSGGSSRPTCNF*MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIED 469 G +S + C + +GH+K++ + + K+ G+ A V Sbjct: 99 GNQYRYRSISKENDNRCYYCKKEGHWKRDCPK---------KSKQQQQKKSGEEASVASR 149 Query: 470 LKDSRDVLTAESGRGMYADTWLLDSGCTYHMCPRR 574 L+ + L S +D+W+LDS C+YHMCP R Sbjct: 150 LEKDSETLCTFSCMDS-SDSWILDSDCSYHMCPFR 183 >emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] Length = 1181 Score = 77.8 bits (190), Expect(2) = 2e-27 Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 17/195 (8%) Frame = +2 Query: 41 HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL*DI*QVF* 214 HL F I DL +M CSLPSSY + TI+Y + L L ++ Sbjct: 120 HLSAFKEIVADLESMEVKYDEKDLALILLCSLPSSYANFRDTILYSRDTLTLKEVYDALH 179 Query: 215 NNEPMKR-----ANSKEASDLVVRV--------NKGKPKNKEF--GKSSGGSSRPTCNF* 349 E MK+ ++ +A LVVR NK + K+ G+S +C + Sbjct: 180 AKEKMKKMVPSEGSNSQAEGLVVRGSQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYC 239 Query: 350 MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKDSRDVLTAESGRGMYADT 529 GH + ++ K+ G K + A V+ D K ++L A +G +D Sbjct: 240 KRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQ 299 Query: 530 WLLDSGCTYHMCPRR 574 W+LD+ CTYHMCP R Sbjct: 300 WILDTACTYHMCPNR 314 Score = 73.9 bits (180), Expect(2) = 2e-27 Identities = 32/74 (43%), Positives = 52/74 (70%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF++Y V GG+VLM ++ C + GIG +I++ G RTL+ VRH+P+LK++L Sbjct: 310 MCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSL 369 Query: 738 LSLGALEAQGCKFS 779 +SL L+ +G K+S Sbjct: 370 ISLCTLDRKGYKYS 383 >gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1241 Score = 75.5 bits (184), Expect(2) = 6e-27 Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 17/195 (8%) Frame = +2 Query: 41 HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL*DI*QVF* 214 HL F I DL +M CSLPSSY + TI+Y + L L ++ Sbjct: 29 HLSAFKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALH 88 Query: 215 NNEPMKR-----ANSKEASDLVVRV--------NKGKPKNKEF--GKSSGGSSRPTCNF* 349 E MK+ ++ +A LVVR NK + K+ G+S +C + Sbjct: 89 AKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTNNKSRDKSSSIYRGRSKSRGRYKSCKYC 148 Query: 350 MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKDSRDVLTAESGRGMYADT 529 GH + ++ K+ K + A V+ D K ++L A +G +D Sbjct: 149 KRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQ 208 Query: 530 WLLDSGCTYHMCPRR 574 W+LD+ CTYHMCP R Sbjct: 209 WILDTACTYHMCPNR 223 Score = 74.7 bits (182), Expect(2) = 6e-27 Identities = 33/74 (44%), Positives = 52/74 (70%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF++Y AV GG+VLM ++ C + GIG +I++ G RTL VRH+P+LK++L Sbjct: 219 MCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSL 278 Query: 738 LSLGALEAQGCKFS 779 +SL L+ +G K+S Sbjct: 279 ISLCTLDRKGYKYS 292 >emb|CAJ86151.1| H0413E07.4 [Oryza sativa] Length = 1205 Score = 75.5 bits (184), Expect(2) = 7e-27 Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 17/195 (8%) Frame = +2 Query: 41 HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL*DI*QVF* 214 HL F I DL +M CSLPSSY + TI+Y + L L ++ Sbjct: 105 HLSVFKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALH 164 Query: 215 NNEPMKR-----ANSKEASDLVVRV--------NKGKPKNKEF--GKSSGGSSRPTCNF* 349 E MK+ ++ +A LVV+ NK + K+ G+S +C + Sbjct: 165 AKEKMKKMVPSEGSNSQAEGLVVQGSQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYC 224 Query: 350 MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKDSRDVLTAESGRGMYADT 529 GH + ++ K+ G K A V+ D K ++L A +G +D Sbjct: 225 KRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQTSDQ 284 Query: 530 WLLDSGCTYHMCPRR 574 W+LD+ CTYHMCP R Sbjct: 285 WILDTACTYHMCPNR 299 Score = 74.3 bits (181), Expect(2) = 7e-27 Identities = 32/74 (43%), Positives = 52/74 (70%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF++Y V GG+VLM ++ C + GIG +I++ G RTL+ VRH+P+LK++L Sbjct: 295 MCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSL 354 Query: 738 LSLGALEAQGCKFS 779 +SL L+ +G K+S Sbjct: 355 ISLCTLDCKGYKYS 368 >gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1138 Score = 75.5 bits (184), Expect(2) = 2e-26 Identities = 54/195 (27%), Positives = 81/195 (41%), Gaps = 17/195 (8%) Frame = +2 Query: 41 HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL*DI*QVF* 214 HL F I DL +M CSLPSSY + TI+Y + L L ++ Sbjct: 62 HLSAFKEIVADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALH 121 Query: 215 NNEPMKR-----ANSKEASDLVVRVNKGKPKNKEFGKSSGGSSR----------PTCNF* 349 E MK+ ++ +A LVVR + K K + SS +C + Sbjct: 122 TKEKMKKMVPSEGSNSQAEGLVVRGRQQKKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYC 181 Query: 350 MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKDSRDVLTAESGRGMYADT 529 GH + ++ K+ K + A ++ D K ++L A +G +D Sbjct: 182 KRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAIVTDEKSDAELLVAYAGCAQTSDQ 241 Query: 530 WLLDSGCTYHMCPRR 574 W+LD+ CTYHMCP R Sbjct: 242 WILDTACTYHMCPNR 256 Score = 73.2 bits (178), Expect(2) = 2e-26 Identities = 33/74 (44%), Positives = 52/74 (70%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF++Y AV GG+VLM ++ C + GIG +I++ G RTL+ VRH P+LK++L Sbjct: 252 MCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCIRTLSDVRHFPNLKRSL 311 Query: 738 LSLGALEAQGCKFS 779 +SL L+ +G K+S Sbjct: 312 ISLRTLDRKGYKYS 325 >gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1312 Score = 75.1 bits (183), Expect(2) = 8e-26 Identities = 32/74 (43%), Positives = 53/74 (71%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF++Y A+ GG+VLM ++ C + GIG +I++ G RTL+ VRH+P+LK++L Sbjct: 345 MCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSL 404 Query: 738 LSLGALEAQGCKFS 779 +SL L+ +G K+S Sbjct: 405 ISLCTLDRKGYKYS 418 Score = 71.2 bits (173), Expect(2) = 8e-26 Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 17/195 (8%) Frame = +2 Query: 41 HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL*DI*QVF* 214 HL TF I DL ++ CSLPSSY + TI+Y L L ++ Sbjct: 155 HLSTFKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYSHDTLILKEVYDALH 214 Query: 215 NNEPMKR-----ANSKEASDLVVR----------VNKGKPKNKEFGKSSGGSSRPTCNF* 349 E MK+ ++ +A LVVR ++ K + G+S +C + Sbjct: 215 AKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYC 274 Query: 350 MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKDSRDVLTAESGRGMYADT 529 GH + ++ K+ G K + A V+ D K ++L A +G +D Sbjct: 275 KRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQ 334 Query: 530 WLLDSGCTYHMCPRR 574 W+LD+ TYHMCP R Sbjct: 335 WILDTAWTYHMCPNR 349 >gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1280 Score = 75.1 bits (183), Expect(2) = 8e-26 Identities = 32/74 (43%), Positives = 53/74 (71%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF++Y A+ GG+VLM ++ C + GIG +I++ G RTL+ VRH+P+LK++L Sbjct: 345 MCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSL 404 Query: 738 LSLGALEAQGCKFS 779 +SL L+ +G K+S Sbjct: 405 ISLCTLDRKGYKYS 418 Score = 71.2 bits (173), Expect(2) = 8e-26 Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 17/195 (8%) Frame = +2 Query: 41 HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL*DI*QVF* 214 HL TF I DL ++ CSLPSSY + TI+Y L L ++ Sbjct: 155 HLSTFKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYSHDTLILKEVYDALH 214 Query: 215 NNEPMKR-----ANSKEASDLVVR----------VNKGKPKNKEFGKSSGGSSRPTCNF* 349 E MK+ ++ +A LVVR ++ K + G+S +C + Sbjct: 215 AKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYC 274 Query: 350 MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKDSRDVLTAESGRGMYADT 529 GH + ++ K+ G K + A V+ D K ++L A +G +D Sbjct: 275 KRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQ 334 Query: 530 WLLDSGCTYHMCPRR 574 W+LD+ TYHMCP R Sbjct: 335 WILDTAWTYHMCPNR 349 >emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] Length = 344 Score = 82.4 bits (202), Expect(2) = 1e-25 Identities = 36/67 (53%), Positives = 48/67 (71%) Frame = +3 Query: 570 GEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNLLSLG 749 G+WFS+Y+ +DGG VLM N C++VGI +I++H G RTLT VRHVP L KNL+ L Sbjct: 249 GDWFSTYQPIDGGKVLMGNKVACKVVGIHXIQIKMHGGIIRTLTNVRHVPKLNKNLIFLR 308 Query: 750 ALEAQGC 770 L++ GC Sbjct: 309 TLDSNGC 315 Score = 63.5 bits (153), Expect(2) = 1e-25 Identities = 51/155 (32%), Positives = 69/155 (44%), Gaps = 6/155 (3%) Frame = +2 Query: 122 CSLPSSYDHLVTTIMYGK*ILEL*DI*QVF*NNEPMKRANSKE-----ASDLVVRVNKGK 286 CSLP+SY+H V +MYG+ L + D+ +V N+ +K+ K LV R K Sbjct: 104 CSLPNSYEHFVDIMMYGRGTLFIKDV-RVALNSRELKKMVFKSRKYDSGEGLVARGRTRK 162 Query: 287 PKNKEFGKSSGGS-SRPTCNF*MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVI 463 N G+S S C +GH+ KN K K NS D T K + Sbjct: 163 KNNGRRGRSRSKSRGNNKCFKCKKEGHYVKNXPDRKGKENKRNYNSGDATFAKEN----- 217 Query: 464 EDLKDSRDVLTAESGRGMYADTWLLDSGCTYHMCP 568 ++ DVL D W+LDSGC+YHM P Sbjct: 218 ---SNTTDVLLVXVTNS--DDEWILDSGCSYHMSP 247 >emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] Length = 777 Score = 88.2 bits (217), Expect(2) = 2e-25 Identities = 39/73 (53%), Positives = 52/73 (71%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C + +WFSSY+ V+GG +L+ NN C +VGIG I +H G+ RTL VRHVPDLK+NL Sbjct: 188 MCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGIGTMAINMHDGKTRTLKEVRHVPDLKRNL 247 Query: 738 LSLGALEAQGCKF 776 +SLG L+ G F Sbjct: 248 ISLGTLDKSGYNF 260 Score = 56.6 bits (135), Expect(2) = 2e-25 Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 2/152 (1%) Frame = +2 Query: 125 SLPSSYDHLVTTIMYGK*ILEL*DI*QVF*NNEPMKRANSKEASDLVVRVNKGKPKNKEF 304 SLP S H T+ YGK + D+ N + ++SD + N GK ++K Sbjct: 63 SLPKSLKHFKETLKYGKDDITFDDV-----QNALNAKVLDMKSSD---KTNGGKSRSKSK 114 Query: 305 GKSSGGSSRPTCNF*MNKGHFKKNY--KQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKD 478 K C G ++ +Q +E + GS A +I+D D Sbjct: 115 SKGKKDYRNVKCYHCNKIGQIRRICPDRQQEEKTQAQGS------------AAIIDDGYD 162 Query: 479 SRDVLTAESGRGMYADTWLLDSGCTYHMCPRR 574 S +VLT + W+LDSGCTYHMCPRR Sbjct: 163 STEVLTIRLNPNH--EEWVLDSGCTYHMCPRR 192 >gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gb|ABO36636.1| copia LTR rider [Solanum lycopersicum] Length = 1307 Score = 81.3 bits (199), Expect(2) = 5e-25 Identities = 37/74 (50%), Positives = 52/74 (70%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 IC + EWF++Y VDGGS+ M N+ VC++VG G+ +IR H G TL VRHVP + KNL Sbjct: 289 ICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNL 348 Query: 738 LSLGALEAQGCKFS 779 +SL L+++G +S Sbjct: 349 ISLSLLDSKGFSWS 362 Score = 62.4 bits (150), Expect(2) = 5e-25 Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 6/156 (3%) Frame = +2 Query: 125 SLPSSYDHLVTTIMYGK*ILEL*DI*QVF*NNEPMKRANSK----EASDLVVRVNKGKPK 292 SLP S+++ V + + GK + L ++ + E +AN + S L KG+ Sbjct: 148 SLPMSFENFVQSFIVGKDTVSLEEVRSALHSRELRHKANGTSTDIQPSGLFTSSRKGRKN 207 Query: 293 NKEFGKSSGGSSRP--TCNF*MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIE 466 + K ++P CN+ KGH+K + + K+ +K ++ A E Sbjct: 208 GGKKNKPMSKGAKPDDVCNYCKEKGHWKFDCPKKKKQSEKQSVSA----------AVAEE 257 Query: 467 DLKDSRDVLTAESGRGMYADTWLLDSGCTYHMCPRR 574 D D+ ++D W+LDSG +YH+CPRR Sbjct: 258 DTNSEEDIALVADEHTHHSDVWVLDSGASYHICPRR 293 >gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum] Length = 707 Score = 90.1 bits (222), Expect(2) = 6e-25 Identities = 39/69 (56%), Positives = 54/69 (78%) Frame = +3 Query: 573 EWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNLLSLGA 752 +WF++Y + +GG VLM N+ C++VG G +I+ H G RTLT VRHVPDLK+NL+SLG Sbjct: 300 DWFTTYESFNGGLVLMGNDAQCKVVGKGTIKIKTHDGVVRTLTSVRHVPDLKRNLISLGT 359 Query: 753 LEAQGCKFS 779 LE+QGC++S Sbjct: 360 LESQGCRYS 368 Score = 53.1 bits (126), Expect(2) = 6e-25 Identities = 58/193 (30%), Positives = 75/193 (38%), Gaps = 8/193 (4%) Frame = +2 Query: 20 EGTPSL*HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*I-LEL 190 EGTP HL FN I DL + SLP SY H ++YG + L Sbjct: 113 EGTPIQSHLGEFNSIIIDLENLDVEIDDEDKAVLLIVSLPPSYRHFKEIMLYGNNVTLSF 172 Query: 191 *DI*QVF*NNEPMKRANSKEASD--LVVRVNKGKPKNKEFGKSSGGSSRPTCNF*MNKGH 364 D+ + E E+S LVVR +N E G S S+ + Sbjct: 173 DDVKSNLLSKEKFDTQIHSESSGEGLVVR-----GRNHEVGASGKNQSKSKGKNSKYCRY 227 Query: 365 FKKNYKQYKEWLK-KNGSNSTDDTKR--KGDHAGVIEDLKDSRDVLTAESGRGMYADTWL 535 KK + E K KN N D K+ K A +E D + A + W+ Sbjct: 228 CKKRNHEISECYKLKNKQNREDKGKQPEKSAEASFVETESDG-ECFIASGTEQRSKNEWV 286 Query: 536 LDSGCTYHMCPRR 574 LDSGCT+HM P R Sbjct: 287 LDSGCTFHMSPNR 299 >gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 2340 Score = 72.0 bits (175), Expect(2) = 2e-24 Identities = 32/74 (43%), Positives = 52/74 (70%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF++Y AV G+VLM ++ C + GIG +I++ G RTL+ VRH+P+LK++L Sbjct: 517 MCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSL 576 Query: 738 LSLGALEAQGCKFS 779 +SL L+ +G K+S Sbjct: 577 ISLCTLDRKGYKYS 590 Score = 69.7 bits (169), Expect(2) = 2e-24 Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 17/195 (8%) Frame = +2 Query: 41 HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL*DI*QVF* 214 HL F I DL +M CSLPSSY + TI+Y + L L ++ Sbjct: 327 HLSAFKEIIADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALH 386 Query: 215 NNEPMKR-----ANSKEASDLVV--RVNKGKPKNKEFGKSSG---GSSRP-----TCNF* 349 E MK+ ++ +A L+V R + KN+ KSS G S+ +C + Sbjct: 387 VKEKMKKMVPSEGSNSQAEGLIVWGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYC 446 Query: 350 MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKDSRDVLTAESGRGMYADT 529 GH + + K+ G K + A V+ D K ++L A +G +D Sbjct: 447 KRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQ 506 Query: 530 WLLDSGCTYHMCPRR 574 W+L++ C YHMCP R Sbjct: 507 WILNTACIYHMCPNR 521 >dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] Length = 1601 Score = 72.0 bits (175), Expect(2) = 2e-24 Identities = 32/74 (43%), Positives = 52/74 (70%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF++Y AV G+VLM ++ C + GIG +I++ G RTL+ VRH+P+LK++L Sbjct: 310 MCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSL 369 Query: 738 LSLGALEAQGCKFS 779 +SL L+ +G K+S Sbjct: 370 ISLCTLDRKGYKYS 383 Score = 69.7 bits (169), Expect(2) = 2e-24 Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 17/195 (8%) Frame = +2 Query: 41 HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL*DI*QVF* 214 HL F I DL +M CSLPSSY + TI+Y + L L ++ Sbjct: 120 HLSAFKEIIADLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALH 179 Query: 215 NNEPMKR-----ANSKEASDLVV--RVNKGKPKNKEFGKSSG---GSSRP-----TCNF* 349 E MK+ ++ +A L+V R + KN+ KSS G S+ +C + Sbjct: 180 VKEKMKKMVPSEGSNSQAEGLIVWGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYC 239 Query: 350 MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKDSRDVLTAESGRGMYADT 529 GH + + K+ G K + A V+ D K ++L A +G +D Sbjct: 240 KRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQ 299 Query: 530 WLLDSGCTYHMCPRR 574 W+L++ C YHMCP R Sbjct: 300 WILNTACIYHMCPNR 314 >gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1211 Score = 70.5 bits (171), Expect(2) = 1e-23 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 17/195 (8%) Frame = +2 Query: 41 HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL*DI*QVF* 214 HL F +I DL +M CSLPSSY + TI+Y L L ++ Sbjct: 120 HLSAFKKIVADLESMEVKYDEEDLCLILLCSLPSSYANFRDTILYSCDTLTLKEVYDALH 179 Query: 215 NNEPMKR-----ANSKEASDLVVR----------VNKGKPKNKEFGKSSGGSSRPTCNF* 349 E +K+ ++ +A LVVR ++ K + G+S +C + Sbjct: 180 AKEKIKKMVPSEGSNSQAEGLVVRGRQQEKNTNSKSRDKSSSSYRGRSKSRGRYKSCKYY 239 Query: 350 MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKDSRDVLTAESGRGMYADT 529 GH + ++ K+ G K + A V+ D K ++L A +G +D Sbjct: 240 KRDGHDISECWKLQDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQ 299 Query: 530 WLLDSGCTYHMCPRR 574 W+LD+ CTYHMC R Sbjct: 300 WILDTACTYHMCLNR 314 Score = 68.6 bits (166), Expect(2) = 1e-23 Identities = 30/74 (40%), Positives = 51/74 (68%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF++Y AV GG+VLM ++ C + G+ +I++ G RTL+ VRH+P+LK++L Sbjct: 310 MCLNRDWFATYEAVQGGTVLMGDDTPCEVAGVETVQIKMFDGCIRTLSDVRHIPNLKRSL 369 Query: 738 LSLGALEAQGCKFS 779 +SL L+ + K+S Sbjct: 370 ISLCTLDRKVYKYS 383 >gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 983 Score = 71.6 bits (174), Expect(2) = 2e-23 Identities = 62/198 (31%), Positives = 86/198 (43%), Gaps = 20/198 (10%) Frame = +2 Query: 41 HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL*DI*QVF* 214 HL F I DL +M CSLPSSY + TI+Y + L L ++ Sbjct: 120 HLSAFKEIVTDLESMEVKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDTLH 179 Query: 215 NNEPMKR-----ANSKEASDLVVRVNKGKPKNKEFGKSSGGSSRPTCNF*MNKGHFKKNY 379 E MK+ ++ +A LVVR + + KN KS SS ++G +K +Y Sbjct: 180 AKEKMKKMVPSEGSNSQAEGLVVR-GRQQEKNTN-SKSRDKSSSSYRGRSKSRGKYK-SY 236 Query: 380 KQYKE--------WL-----KKNGSNSTDDTKRKGDHAGVIEDLKDSRDVLTAESGRGMY 520 K YK W K+ G K K A V+ D K ++L A +G Sbjct: 237 KYYKRDRHDISECWKLQDKDKRTGKYVPKGKKEKEGKAVVVTDGKSDAELLVAYAGCAQT 296 Query: 521 ADTWLLDSGCTYHMCPRR 574 +D W+LD+ CT HMCP R Sbjct: 297 SDQWILDTACTNHMCPNR 314 Score = 67.0 bits (162), Expect(2) = 2e-23 Identities = 29/74 (39%), Positives = 50/74 (67%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF++Y A+ GG+V M ++ C + IG +I++ G RTL+ V H+P+LK++L Sbjct: 310 MCPNRDWFATYEALQGGTVFMGDDTPCEVADIGTVQIKMFDGCIRTLSDVWHIPNLKRSL 369 Query: 738 LSLGALEAQGCKFS 779 +SL L+ +G K+S Sbjct: 370 ISLCTLDRKGYKYS 383 >gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris] Length = 867 Score = 75.1 bits (183), Expect(2) = 2e-23 Identities = 35/70 (50%), Positives = 49/70 (70%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF ++ +DGG V M N+ C+ VGIG+ ++R H G R L VR+VP LKKNL Sbjct: 235 MCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNL 294 Query: 738 LSLGALEAQG 767 +SLGALE++G Sbjct: 295 ISLGALESKG 304 Score = 63.2 bits (152), Expect(2) = 2e-23 Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 8/158 (5%) Frame = +2 Query: 125 SLPSSYDHLVTTIMYGK*ILEL*DI*QVF*NNEPMKRANSKEAS----DLVVRVNKGKPK 292 SLP ++HL TT+++GK + L + ++E K+ K S + +V + + + Sbjct: 92 SLPDEFEHLETTLLHGKENVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVARGRQQSQ 151 Query: 293 NKE---FGKSSGGS-SRPTCNF*MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGV 460 KE KS G + ++ C F KGH+KK+ + ++ K+ + + K D V Sbjct: 152 TKERRGMSKSKGRAVAKDECAFCHEKGHWKKDCPKLQK--KEKVLQDANVAECKSD---V 206 Query: 461 IEDLKDSRDVLTAESGRGMYADTWLLDSGCTYHMCPRR 574 D+ L +Y D W+LDSGCTYHMCP R Sbjct: 207 ESDIS-----LIVSLSASLYLDEWILDSGCTYHMCPIR 239 >gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum] Length = 1309 Score = 69.3 bits (168), Expect(2) = 3e-23 Identities = 30/70 (42%), Positives = 49/70 (70%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C WF + + G VL+ NN C+++GIG+ +++H G RT+T VR+VPDL++NL Sbjct: 293 MCPIKSWFQNLVEEESGHVLLGNNRECKVMGIGSVLLKMHDGCVRTITEVRYVPDLRRNL 352 Query: 738 LSLGALEAQG 767 LS+G L+++G Sbjct: 353 LSIGMLDSKG 362 Score = 68.6 bits (166), Expect(2) = 3e-23 Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 10/194 (5%) Frame = +2 Query: 17 DEGTPSL*HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL 190 +EG H+ FN+I DL + SLP SY+H V T++YGK L + Sbjct: 112 EEGKDLKKHMDEFNKIILDLKNVDIKITDEDCAILMLSSLPRSYEHFVDTMLYGKETLTM 171 Query: 191 *DI*QVF*NNEPMKRANSK-----EASDLVVRVNKGKPKNKEFGKSSGGS---SRPTCNF 346 ++ + E K+ +K E ++ R K + +N++ GK S + C Sbjct: 172 AEVKSALNSKELHKKNETKMESTGEGLNVRGRTYKRESRNEKGGKHRSQSRTRGKLKCFV 231 Query: 347 *MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKDSRDVLTAESGRGMYAD 526 +GHFKK+ + + + + K GD A V+ D +S +VL R D Sbjct: 232 CHKEGHFKKDCPDRR-------ARNPERRKDPGD-AAVVSDGYESAEVLVVS--RTNKQD 281 Query: 527 TWLLDSGCTYHMCP 568 W++DSGC++HMCP Sbjct: 282 CWVMDSGCSFHMCP 295 >emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris] Length = 813 Score = 75.1 bits (183), Expect(2) = 4e-23 Identities = 35/70 (50%), Positives = 49/70 (70%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF ++ +DGG V M N+ C+ VGIG+ ++R H G R L VR+VP LKKNL Sbjct: 234 MCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNL 293 Query: 738 LSLGALEAQG 767 +SLGALE++G Sbjct: 294 ISLGALESKG 303 Score = 62.0 bits (149), Expect(2) = 4e-23 Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 8/158 (5%) Frame = +2 Query: 125 SLPSSYDHLVTTIMYGK*ILEL*DI*QVF*NNEPMK----RANSKEASDLVVRVNKGKPK 292 SLP ++HL TT+++GK + L + ++E K R S + + +V + + + Sbjct: 91 SLPDEFEHLETTLLHGKENVSLDAVCSALYSHELRKQDKMRTKSTTSEEALVIRGRQQSQ 150 Query: 293 NKE---FGKSSGGS-SRPTCNF*MNKGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGV 460 KE KS G ++ C F KGH+KK+ + ++ K+ + + K D V Sbjct: 151 TKERRGMSKSKGRVVAKDECAFCHEKGHWKKDCPKLQK--KEKVPQDANVAECKSD---V 205 Query: 461 IEDLKDSRDVLTAESGRGMYADTWLLDSGCTYHMCPRR 574 D+ L Y D W+LDSGCTYHMCP R Sbjct: 206 ESDIS-----LIVSLSASSYPDEWILDSGCTYHMCPIR 238 >dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] Length = 778 Score = 72.4 bits (176), Expect(2) = 1e-22 Identities = 31/74 (41%), Positives = 51/74 (68%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C +WF++Y V GG+VLM ++ C + GIG +I++ G RTL+ VRH+P+LK++L Sbjct: 276 MCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSL 335 Query: 738 LSLGALEAQGCKFS 779 +S L+ +G K+S Sbjct: 336 ISFCTLDRKGYKYS 349 Score = 63.5 bits (153), Expect(2) = 1e-22 Identities = 51/186 (27%), Positives = 76/186 (40%), Gaps = 8/186 (4%) Frame = +2 Query: 41 HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL*DI*QVF* 214 HL F I DL +M CSLPSSY + TI+Y + L L ++ Sbjct: 120 HLSAFKEIVADLESMEVKHDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALH 179 Query: 215 NNEPMKR-----ANSKEASDLVVRVNKGKPKNKEFGKSSGGSSRPTCNF*MNKGHFKKNY 379 E MK+ ++ +A LVV V N+ + Sbjct: 180 AKEKMKKMVPSEGSNSQAESLVVGVG-------------------------NRRRTQTTN 214 Query: 380 KQYKEWLKKNGSNSTDDTKRKGD-HAGVIEDLKDSRDVLTAESGRGMYADTWLLDSGCTY 556 ++ K + G S + K++ + A V+ D K ++L A G +D W+LD+ CTY Sbjct: 215 QEIKAQVATVGDQSPEAGKKEEEGKAAVVTDEKSDAELLVAYVGCAQTSDQWILDTACTY 274 Query: 557 HMCPRR 574 HMCP R Sbjct: 275 HMCPNR 280 >gb|KYP46255.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 507 Score = 80.9 bits (198), Expect(2) = 1e-22 Identities = 37/78 (47%), Positives = 50/78 (64%) Frame = +3 Query: 558 ICAQGEWFSSYRAVDGGSVLMENNFVCRIVGIGNTRIRIHAGQGRTLTGVRHVPDLKKNL 737 +C WF +Y GG V M N+ C+ +GIG +I++H G RTLT VRHVPDLKKNL Sbjct: 197 MCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPDLKKNL 256 Query: 738 LSLGALEAQGCKFSRALK 791 +S+G L +G K + +K Sbjct: 257 ISVGVLHTKGFKCNVEVK 274 Score = 55.1 bits (131), Expect(2) = 1e-22 Identities = 53/194 (27%), Positives = 78/194 (40%), Gaps = 9/194 (4%) Frame = +2 Query: 20 EGTPSL*HLITFNRI--DLLAMXXXXXXXXXXXXXXCSLPSSYDHLVTTIMYGK*ILEL* 193 E TP HL N I +L + SLP SY+ V ++ GK + + Sbjct: 22 EDTPLQDHLDELNSILMELRYIDVKIEDEDAAMILLASLPPSYESFVNSLTVGKECITME 81 Query: 194 DI*QVF*NNEPMKRANSKE-----ASDLVVRVNKGKPKNKEFGKSSGG-SSRPTCNF*MN 355 ++ + E +A++ A L K K KE GK + R CN+ Sbjct: 82 EVKSSLHSRELWFKASANSEGVNGAGLLAFNSTKNGKKKKEQGKKKTKVNPRDICNYCKE 141 Query: 356 KGHFKKNYKQYKEWLKKNGSNSTDDTKRKGDHAGVIEDLKDSRD-VLTAESGRGMYADTW 532 GH+KK+ + K+N +K ED + VL+ A+ W Sbjct: 142 PGHWKKDCPK-----KRN---------QKSVAVAAQEDSSFENELVLSIVDNHQHSAEQW 187 Query: 533 LLDSGCTYHMCPRR 574 +LDSGC+YHMCP R Sbjct: 188 VLDSGCSYHMCPNR 201