BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00028397
         (445 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_070420556.1| (Fe-S)-binding protein [Corynebacterium sp. ...    56   4e-06
ref|WP_016362261.1| ATP-dependent helicase [Paenibacillus mucila...    55   7e-06

>ref|WP_070420556.1| (Fe-S)-binding protein [Corynebacterium sp. HMSC06C06]
 gb|OFT51479.1| hypothetical protein HMPREF3153_08330 [Corynebacterium sp. HMSC06C06]
          Length = 870

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 41/114 (35%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
 Frame = +3

Query: 114  STPDPLGPTLTAASAPPRCCLAPIRRSLSMSPLPAGPQR----SAPQHPCTAGLPPSAAS 281
            +T DP  PT T ASAP     AP   + +  P PA P      S PQ P     PP+ A+
Sbjct: 723  TTADPAAPTETTASAPTTKAAAPAAPAPAAPPAPAAPAAPAAPSTPQAPSAPTAPPAPAA 782

Query: 282  LIRCPGAPSCRSPIPTRARPRYASSSLSRPTPAGRLRLQLQPRA*PIAAPSSYA 443
                P AP+  +P PT   P  AS +   P PA        P+A   A PS+ A
Sbjct: 783  -PAAPAAPAPAAPAPTPPAPPAASGATPPPAPAA-------PKAPTPAPPSAPA 828


>ref|WP_016362261.1| ATP-dependent helicase [Paenibacillus mucilaginosus]
 gb|AFH59547.2| RNA helicase [Paenibacillus mucilaginosus K02]
          Length = 590

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 45/123 (36%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
 Frame = -1

Query: 370 GRESEELAYRGLARVGIGERHEGAPGQRIRLAALGGRPAVHGC*GAERWGPAGSGDMESD 191
           GR  E     G    G   R   APG R R AA    PA  G   AERWG A SG  +S 
Sbjct: 390 GRRGEARTAGGRGARGAAARGAAAPGGRGRAAA----PAPRGGESAERWGAAASGGRDSA 445

Query: 190 RRIGARQHRGGAEAAVRVGPSGSGVEPRWGDEGGPVALAEGL-----ADGGSRRRATEAV 26
            R   R   GG ++A R    G+      G  GG  A AEG        GG+R  A    
Sbjct: 446 ARGAGRGTAGGRDSAARGAGRGTA-----GGRGGAAARAEGALPWSGTQGGTRDSAAPRG 500

Query: 25  GAG 17
           G G
Sbjct: 501 GRG 503