BLASTX nr result
ID: Ophiopogon27_contig00028004
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00028004
(415 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008802326.1| PREDICTED: protein Rf1, mitochondrial-like [... 79 2e-14
ref|XP_010935655.1| PREDICTED: protein Rf1, mitochondrial-like [... 76 3e-13
ref|XP_019710038.1| PREDICTED: protein Rf1, mitochondrial-like [... 73 3e-12
ref|XP_019709674.1| PREDICTED: protein Rf1, mitochondrial-like [... 73 3e-12
ref|XP_020241490.1| protein Rf1, mitochondrial-like isoform X2 [... 73 3e-12
ref|XP_010935656.1| PREDICTED: protein Rf1, mitochondrial-like [... 73 3e-12
ref|XP_010935563.1| PREDICTED: protein Rf1, mitochondrial-like [... 73 3e-12
ref|XP_020241481.1| protein Rf1, mitochondrial-like isoform X1 [... 73 3e-12
ref|XP_010935652.1| PREDICTED: protein Rf1, mitochondrial-like [... 72 6e-12
ref|XP_019709584.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 72 7e-12
ref|XP_010935557.1| PREDICTED: protein Rf1, mitochondrial [Elaei... 69 8e-11
ref|XP_020243455.1| pentatricopeptide repeat-containing protein ... 67 1e-10
gb|ONK76255.1| uncharacterized protein A4U43_C03F25650 [Asparagu... 68 1e-10
ref|XP_020257989.1| protein Rf1, mitochondrial-like [Asparagus o... 68 1e-10
ref|XP_020692405.1| pentatricopeptide repeat-containing protein ... 62 2e-08
ref|XP_010933049.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 60 9e-08
ref|XP_019709165.1| PREDICTED: protein Rf1, mitochondrial-like [... 60 1e-07
ref|XP_010933042.1| PREDICTED: protein Rf1, mitochondrial-like [... 59 2e-07
gb|PKA51019.1| Pentatricopeptide repeat-containing protein [Apos... 59 3e-07
ref|XP_020240881.1| putative pentatricopeptide repeat-containing... 58 6e-07
>ref|XP_008802326.1| PREDICTED: protein Rf1, mitochondrial-like [Phoenix dactylifera]
Length = 765
Score = 79.3 bits (194), Expect = 2e-14
Identities = 39/72 (54%), Positives = 49/72 (68%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
+EDAL LFD GA+PKPSI +LN IL K HYPT+LSLY+ +N++ GI+P
Sbjct: 74 IEDALDLFDTAAGASPKPSISVINVVLNAILRRK---HYPTVLSLYNKLNQMQGITPTIH 130
Query: 317 TYGVVIKCCTSM 352
TYGV+I CC M
Sbjct: 131 TYGVLINCCCRM 142
>ref|XP_010935655.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
Length = 793
Score = 75.9 bits (185), Expect = 3e-13
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
+EDA+ LFD A+PKPSI + +LN I K HYPT+LSLY+ +N++ GI P
Sbjct: 74 IEDAIDLFDTAASASPKPSIYAINVLLNAICRMK---HYPTVLSLYNKLNQMQGIPPSMP 130
Query: 317 TYGVVIKCCTSM 352
TYGV+IKCC M
Sbjct: 131 TYGVLIKCCCRM 142
>ref|XP_019710038.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
Length = 793
Score = 73.2 bits (178), Expect = 3e-12
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
+EDAL LF+ +PKPSI + +LN I K HYPT+LSLY+ +N++ GI P
Sbjct: 74 IEDALDLFETAANVSPKPSIYAINVLLNAICRMK---HYPTVLSLYNKLNQMQGIPPSIH 130
Query: 317 TYGVVIKCCTSM 352
TYGV+IKCC M
Sbjct: 131 TYGVLIKCCCRM 142
>ref|XP_019709674.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
ref|XP_019709675.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
Length = 794
Score = 73.2 bits (178), Expect = 3e-12
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
+EDA+ LF A+PKPSI + +LN I TK HYPT+LSLY+ +N++ GI P
Sbjct: 74 IEDAIDLFGTAASASPKPSIYAINVLLNAIRRTK---HYPTVLSLYNKLNQLQGIPPNVY 130
Query: 317 TYGVVIKCCTSM 352
TYGV+I CC M
Sbjct: 131 TYGVLINCCCRM 142
>ref|XP_020241490.1| protein Rf1, mitochondrial-like isoform X2 [Asparagus officinalis]
Length = 595
Score = 72.8 bits (177), Expect = 3e-12
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Frame = +2
Query: 134 KVEDALHLFDKMLGANPKPSIDSFTTMLNRILT----TKDPSHYPTILSLYSNMNRVGGI 301
+ E+AL LFD++L A+PKP + SF +LN IL T+ + ++SL++ MNRVGGI
Sbjct: 54 ETEEALVLFDQLLEADPKPPVYSFNLLLNSILRNMKKTRHQKNPALVISLHNKMNRVGGI 113
Query: 302 SPIDVTYGVVIKCCTSM 352
SP TYGV+I CC+S+
Sbjct: 114 SPDGYTYGVLIGCCSSI 130
>ref|XP_010935656.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
Length = 793
Score = 72.8 bits (177), Expect = 3e-12
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
+EDA+ LFD A+PKPSI + +LN I K HYPT+LSLY+ +N++ GI P
Sbjct: 74 IEDAIDLFDTAASASPKPSIFAINVLLNAIRRMK---HYPTVLSLYNKLNQLQGIPPDIH 130
Query: 317 TYGVVIKCCTSM 352
TYGV+I CC M
Sbjct: 131 TYGVLINCCCRM 142
>ref|XP_010935563.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
ref|XP_019709459.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
ref|XP_019709460.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
ref|XP_019709461.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
ref|XP_019709462.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
ref|XP_019709463.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
Length = 794
Score = 72.8 bits (177), Expect = 3e-12
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
+EDA+ LFD A+PKPSI + +LN I K HYPT+LSLY+ +N++ GI P
Sbjct: 74 IEDAIDLFDTAASASPKPSIYAINVLLNAIRRMK---HYPTVLSLYNKLNQLQGIPPNIH 130
Query: 317 TYGVVIKCCTSM 352
TYGV+I CC M
Sbjct: 131 TYGVLINCCCRM 142
>ref|XP_020241481.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
ref|XP_020241482.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
ref|XP_020241483.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
ref|XP_020241484.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
ref|XP_020241485.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
ref|XP_020241486.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
ref|XP_020241487.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
ref|XP_020241488.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
ref|XP_020241489.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
Length = 846
Score = 72.8 bits (177), Expect = 3e-12
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Frame = +2
Query: 134 KVEDALHLFDKMLGANPKPSIDSFTTMLNRILT----TKDPSHYPTILSLYSNMNRVGGI 301
+ E+AL LFD++L A+PKP + SF +LN IL T+ + ++SL++ MNRVGGI
Sbjct: 54 ETEEALVLFDQLLEADPKPPVYSFNLLLNSILRNMKKTRHQKNPALVISLHNKMNRVGGI 113
Query: 302 SPIDVTYGVVIKCCTSM 352
SP TYGV+I CC+S+
Sbjct: 114 SPDGYTYGVLIGCCSSI 130
>ref|XP_010935652.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
Length = 796
Score = 72.0 bits (175), Expect = 6e-12
Identities = 37/72 (51%), Positives = 46/72 (63%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
+EDA+ LFD A+PK SI +LN IL K HYPT+LSLYS +N++ GI P
Sbjct: 77 IEDAIDLFDTAASASPKSSIYVINALLNAILRMK---HYPTVLSLYSKLNQMQGIPPNIH 133
Query: 317 TYGVVIKCCTSM 352
TYGV+I CC M
Sbjct: 134 TYGVLINCCCRM 145
>ref|XP_019709584.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g27270-like [Elaeis guineensis]
Length = 1668
Score = 72.0 bits (175), Expect = 7e-12
Identities = 37/72 (51%), Positives = 46/72 (63%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
+EDA+ LFD A+PK SI +LN IL K HYPT+LSLYS +N++ GI P
Sbjct: 949 IEDAIDLFDTAASASPKSSIYVINVLLNAILRMK---HYPTVLSLYSKLNQMQGIPPNIH 1005
Query: 317 TYGVVIKCCTSM 352
TYGV+I CC M
Sbjct: 1006 TYGVLINCCCRM 1017
Score = 59.3 bits (142), Expect = 2e-07
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
++DAL LF+ A+PKPSI + +L +L K HYPT +SLY+ +NR GIS
Sbjct: 21 MDDALDLFETAASASPKPSIKAINLLLKTVLRMK---HYPTAISLYNKLNRTQGISHGVH 77
Query: 317 TYGVVIKC 340
T G++IKC
Sbjct: 78 TDGLLIKC 85
>ref|XP_010935557.1| PREDICTED: protein Rf1, mitochondrial [Elaeis guineensis]
Length = 800
Score = 68.9 bits (167), Expect = 8e-11
Identities = 34/72 (47%), Positives = 45/72 (62%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
+EDAL LFD + A+PKP I + +LN I K HYP + SLY+ +N++ GI P
Sbjct: 74 IEDALDLFDTAVSASPKPLIYAINVLLNAICRMK---HYPIVFSLYNKLNQMQGIPPSIH 130
Query: 317 TYGVVIKCCTSM 352
TYGV+I CC M
Sbjct: 131 TYGVLINCCCRM 142
>ref|XP_020243455.1| pentatricopeptide repeat-containing protein At1g62680,
mitochondrial-like [Asparagus officinalis]
gb|ONK61263.1| uncharacterized protein A4U43_C08F27890 [Asparagus officinalis]
Length = 206
Score = 66.6 bits (161), Expect = 1e-10
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Frame = +2
Query: 134 KVEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPT---ILSLYSNMNRVGGIS 304
++ +AL +FD++L +NPKP + SF ++L +L T +H+ I+SL++ MN VGGIS
Sbjct: 51 EIGEALGVFDQVLDSNPKPPVSSFNSLLISVLGTIKKTHHQNPNLIISLFNKMNWVGGIS 110
Query: 305 PIDVTYGVVIKCCTSM 352
P D T ++I CC+ M
Sbjct: 111 PDDHTCSILIDCCSGM 126
>gb|ONK76255.1| uncharacterized protein A4U43_C03F25650 [Asparagus officinalis]
Length = 778
Score = 68.2 bits (165), Expect = 1e-10
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Frame = +2
Query: 134 KVEDALHLFDKMLGANPKPSIDSFTTMLNRILTT---KDPSHYPTILSLYSNMNRVGGIS 304
+++++L LFD++L A+PKPS+ SF + IL T + I+SL++ M RVGGIS
Sbjct: 38 EIQESLSLFDQLLEADPKPSVSSFNRLFASILKTIKKTQNKNLALIVSLFNKMKRVGGIS 97
Query: 305 PIDVTYGVVIKCCTSM 352
P + TYG+VI C+SM
Sbjct: 98 PNEFTYGIVIGFCSSM 113
>ref|XP_020257989.1| protein Rf1, mitochondrial-like [Asparagus officinalis]
Length = 781
Score = 68.2 bits (165), Expect = 1e-10
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Frame = +2
Query: 134 KVEDALHLFDKMLGANPKPSIDSFTTMLNRILTT---KDPSHYPTILSLYSNMNRVGGIS 304
+++++L LFD++L A+PKPS+ SF + IL T + I+SL++ M RVGGIS
Sbjct: 38 EIQESLSLFDQLLEADPKPSVSSFNRLFASILKTIKKTQNKNLALIVSLFNKMKRVGGIS 97
Query: 305 PIDVTYGVVIKCCTSM 352
P + TYG+VI C+SM
Sbjct: 98 PNEFTYGIVIGFCSSM 113
>ref|XP_020692405.1| pentatricopeptide repeat-containing protein At1g63330-like
[Dendrobium catenatum]
ref|XP_020692406.1| pentatricopeptide repeat-containing protein At1g63330-like
[Dendrobium catenatum]
ref|XP_020692407.1| pentatricopeptide repeat-containing protein At1g63330-like
[Dendrobium catenatum]
ref|XP_020692408.1| pentatricopeptide repeat-containing protein At1g63330-like
[Dendrobium catenatum]
ref|XP_020692409.1| pentatricopeptide repeat-containing protein At1g63330-like
[Dendrobium catenatum]
gb|PKU67666.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 648
Score = 62.0 bits (149), Expect = 2e-08
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +2
Query: 134 KVEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPID 313
K+ AL LF +L +PKP I SF T+L I K +P +SL+++MNR GGI P
Sbjct: 40 KLSYALDLFQNLLDTDPKPPIYSFNTILISISRMKQ---FPAAISLFNSMNRAGGICPNS 96
Query: 314 VTYGVVIKCCTSM 352
T+G+++ CC M
Sbjct: 97 HTFGILVDCCCRM 109
>ref|XP_010933049.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g63330-like [Elaeis guineensis]
Length = 764
Score = 60.1 bits (144), Expect = 9e-08
Identities = 32/72 (44%), Positives = 43/72 (59%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
VEDAL LFD + A+PKPSI + +L+ I K HYP ++SL + +N + GI P
Sbjct: 51 VEDALDLFDAAVAADPKPSIYAINLLLDAIAGMK---HYPIVISLCNKLNVLSGIQPNIH 107
Query: 317 TYGVVIKCCTSM 352
TY +VI C M
Sbjct: 108 TYSIVINSCRRM 119
>ref|XP_019709165.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
Length = 716
Score = 59.7 bits (143), Expect = 1e-07
Identities = 32/72 (44%), Positives = 42/72 (58%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
VEDAL LFD + A+PKPSI + +L I K HYP ++SL + +N + GI P
Sbjct: 51 VEDALDLFDAAVAADPKPSIYAINLLLGAIAGMK---HYPIVISLCNKLNVLSGIQPNIH 107
Query: 317 TYGVVIKCCTSM 352
TY +VI C M
Sbjct: 108 TYSIVINSCCRM 119
>ref|XP_010933042.1| PREDICTED: protein Rf1, mitochondrial-like [Elaeis guineensis]
Length = 769
Score = 59.3 bits (142), Expect = 2e-07
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
VEDAL LF+ + A+P PSI S +L+ I K HYP ++SL +N + GI P
Sbjct: 50 VEDALDLFNAAVSADPMPSIYSINLLLSAIARMK---HYPVVISLCKKLNLLSGIQPNTC 106
Query: 317 TYGVVIKCCTSM 352
TY +VI C M
Sbjct: 107 TYSIVISSCCRM 118
>gb|PKA51019.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 649
Score = 58.5 bits (140), Expect = 3e-07
Identities = 32/73 (43%), Positives = 42/73 (57%)
Frame = +2
Query: 134 KVEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPID 313
K+ AL LF +L PKP I SF T+L I K +P +SL+++MN GISP
Sbjct: 41 KLSHALDLFQSLLETEPKPPIYSFNTILIGISRMKQ---FPVAISLFNSMNSADGISPNC 97
Query: 314 VTYGVVIKCCTSM 352
T+GV+I CC M
Sbjct: 98 HTFGVLIDCCCKM 110
>ref|XP_020240881.1| putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial [Asparagus officinalis]
Length = 564
Score = 57.8 bits (138), Expect = 6e-07
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +2
Query: 137 VEDALHLFDKMLGANPKPSIDSFTTMLNRILTTKDPSHYPTILSLYSNMNRVGGISPIDV 316
+++AL+LF +ML A+PKP I SF + I K H P +SL+ M RV ISP
Sbjct: 37 IKEALNLFHQMLEADPKPPIYSFNLLFISIKRMKRHLHVP--ISLFDTMRRVASISPDTF 94
Query: 317 TYGVVIKCCTSM 352
TYG++I C+ M
Sbjct: 95 TYGILIDVCSRM 106