BLASTX nr result

ID: Ophiopogon27_contig00027923 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00027923
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK77375.1| uncharacterized protein A4U43_C02F5870 [Asparagus...    59   4e-07
ref|XP_020253770.1| zinc finger CCCH domain-containing protein 1...    59   4e-07

>gb|ONK77375.1| uncharacterized protein A4U43_C02F5870 [Asparagus officinalis]
          Length = 700

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/63 (50%), Positives = 40/63 (63%)
 Frame = -1

Query: 457 SVREEIDGHVVKGRSSSHREASKSYEKLKHYREKRKHEVNNSDSDEMYDRRARNKFSRKQ 278
           S REE +     G SSSHR+ SKS  KLKH R+KR+H  N+S SDE  DR+ R K S  Q
Sbjct: 626 SGREETEESSYNGSSSSHRKPSKSGGKLKHCRKKRRHVDNSSGSDEELDRKPRKKHSHGQ 685

Query: 277 AST 269
            ++
Sbjct: 686 RTS 688


>ref|XP_020253770.1| zinc finger CCCH domain-containing protein 16 [Asparagus
           officinalis]
          Length = 725

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/63 (50%), Positives = 40/63 (63%)
 Frame = -1

Query: 457 SVREEIDGHVVKGRSSSHREASKSYEKLKHYREKRKHEVNNSDSDEMYDRRARNKFSRKQ 278
           S REE +     G SSSHR+ SKS  KLKH R+KR+H  N+S SDE  DR+ R K S  Q
Sbjct: 651 SGREETEESSYNGSSSSHRKPSKSGGKLKHCRKKRRHVDNSSGSDEELDRKPRKKHSHGQ 710

Query: 277 AST 269
            ++
Sbjct: 711 RTS 713


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