BLASTX nr result
ID: Ophiopogon27_contig00027726
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00027726
(402 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PRQ50961.1| putative RNA-directed DNA polymerase [Rosa chinen... 68 1e-10
gb|PRQ31173.1| putative RNA-directed DNA polymerase [Rosa chinen... 67 4e-10
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 64 3e-09
gb|PRQ49673.1| putative RNA-directed DNA polymerase [Rosa chinen... 63 7e-09
gb|PRQ55598.1| putative RNA-directed DNA polymerase [Rosa chinen... 61 4e-08
gb|PON31885.1| hypothetical protein PanWU01x14_366100 [Parasponi... 60 5e-08
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 59 2e-07
gb|PKU74822.1| Retrovirus-related Pol polyprotein from transposo... 59 2e-07
gb|OMO89784.1| Integrase, catalytic core [Corchorus capsularis] 59 3e-07
ref|XP_017179487.1| PREDICTED: uncharacterized protein LOC108169... 58 4e-07
gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc... 58 4e-07
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc... 58 4e-07
ref|XP_015388473.1| PREDICTED: uncharacterized protein LOC107178... 57 6e-07
ref|XP_016559299.1| PREDICTED: uncharacterized protein LOC107858... 57 7e-07
gb|AAF69172.1|AC007915_24 F27F5.11 [Arabidopsis thaliana] 57 1e-06
gb|PRQ16309.1| putative RNA-directed DNA polymerase [Rosa chinen... 57 1e-06
ref|XP_020114563.1| uncharacterized protein LOC109728471 isoform... 57 1e-06
ref|XP_020114543.1| uncharacterized protein LOC109728471 isoform... 57 1e-06
gb|PRQ42184.1| putative RNA-directed DNA polymerase [Rosa chinen... 57 1e-06
ref|XP_020114487.1| uncharacterized protein LOC109728471 isoform... 57 1e-06
>gb|PRQ50961.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 811
Score = 68.2 bits (165), Expect = 1e-10
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Frame = -3
Query: 400 QHKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEP------------SSNASSVFRMQ 257
QHKGYRC+DP SGK+YISRHV+FDE++FPF S +P S++ S+ +
Sbjct: 99 QHKGYRCLDPVSGKVYISRHVTFDENTFPFQEPSLQPPFHNPISHSQPTSTSVPSILPLP 158
Query: 256 SFPDQTLHYLMAAPPQDNSGSSPTISNEQRPN 161
P T + +PP + ++PT+ P+
Sbjct: 159 PLPLPT-PIITPSPPLPSLPTTPTVHTPSPPS 189
>gb|PRQ31173.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1468
Score = 66.6 bits (161), Expect = 4e-10
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = -3
Query: 400 QHKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASSVFRMQSFPDQTLHYLMA 221
+HKGYRC+DP SG++Y+SRHV FDE+SFP+ RK Q+PS S + L +
Sbjct: 722 KHKGYRCLDPKSGRVYVSRHVLFDETSFPY-RKLQDPSVQVSKALELTQLTGPVLIHDAH 780
Query: 220 APPQDNSGSSPTISNE 173
P N+ + ++ ++
Sbjct: 781 LPSGPNARPTSSVQHQ 796
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 64.3 bits (155), Expect = 3e-09
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 15/93 (16%)
Frame = -3
Query: 397 HKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASS-------VFRMQSFPDQT 239
H+GYRC DPSSG++Y+SRHV FDESSFPF + +S+ S +F S P +
Sbjct: 658 HQGYRCFDPSSGRVYLSRHVLFDESSFPFTEPALTSNSSIDSSTDQSILIFGPLSGPSPS 717
Query: 238 L--------HYLMAAPPQDNSGSSPTISNEQRP 164
L ++ PP+ + SSP+ +N P
Sbjct: 718 LSPSPSPSPSPCISDPPRQSHPSSPSAANVAPP 750
>gb|PRQ49673.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 2185
Score = 63.2 bits (152), Expect = 7e-09
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = -3
Query: 400 QHKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASSVFRMQSFPDQTLHYLMA 221
+HKGYRC+DP+S ++Y+SRHV FDE+SFP+ RK Q+PS S + L +
Sbjct: 1331 KHKGYRCLDPTSDRVYVSRHVLFDETSFPY-RKLQDPSVQVSKALELTQLIGPVLIHDAH 1389
Query: 220 APPQDNSGSSPTISNE 173
P N+ + ++ +
Sbjct: 1390 LPSGPNARPTSSVQRQ 1405
>gb|PRQ55598.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 733
Score = 60.8 bits (146), Expect = 4e-08
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 18/97 (18%)
Frame = -3
Query: 397 HKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSN-----------------ASSV 269
HKGY C+DP SG+IY SRHV FDE+SFPF + SS+ +S
Sbjct: 506 HKGYDCLDPISGRIYTSRHVQFDETSFPFKTHTAHTSSSTHSDLPIFLHPYSPPIPTTSP 565
Query: 268 FRMQSFPD-QTLHYLMAAPPQDNSGSSPTISNEQRPN 161
QSFP T H ++P ++ +SPT+ R N
Sbjct: 566 LSSQSFPSIPTPH--TSSPTHHSTSTSPTLIPSPRSN 600
>gb|PON31885.1| hypothetical protein PanWU01x14_366100 [Parasponia andersonii]
Length = 233
Score = 59.7 bits (143), Expect = 5e-08
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = -3
Query: 400 QHKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEP-SSNASSVFRMQSFPDQTLHYLM 224
QHK Y C+DP++G IYISRHV FDESS F S +S ++++ + S P +L
Sbjct: 84 QHKSYLCLDPTTGPIYISRHVVFDESSLLFINHSSSSIASPSNTIVHILSAPLSSLSPST 143
Query: 223 AAPPQDNSGSSPTISN 176
P DN+ +P++++
Sbjct: 144 TPTPTDNTNFTPSLTH 159
>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
Length = 1501
Score = 59.3 bits (142), Expect = 2e-07
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = -3
Query: 397 HKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASSVFRMQSFPDQTLHYLMAA 218
HKG+RC+DP++ ++YI+RH FDE+ FP SQ + S + +F + LH++ +
Sbjct: 667 HKGFRCLDPTTSRLYITRHAQFDETHFPTVPSSQ---AQPLSSLHISNFLEPRLHHIDPS 723
Query: 217 PPQDNSGSS 191
PP S SS
Sbjct: 724 PPSPPSPSS 732
>gb|PKU74822.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 766
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = -3
Query: 394 KGYRCMDPSSGKIYISRHVSFDESSFPF-ARKSQEPSSNASSVFRMQSFPDQTLHYLMAA 218
KGYRC+DP SG++Y+SRHV F+E+SFP+ + Q+ + + ++ ++SFPD
Sbjct: 150 KGYRCLDPKSGRVYVSRHVVFNEASFPYQSTTPQQTTISVAAPTSIESFPD--------- 200
Query: 217 PPQDNSGSSPTISNEQR 167
+GS+P I+ R
Sbjct: 201 ---SQTGSTPAITPPPR 214
>gb|OMO89784.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1048
Score = 58.5 bits (140), Expect = 3e-07
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = -3
Query: 400 QHKGYRCMDPSSGKIYISRHVSFDESSFPFA-RKSQEPSSNASSVFRMQSFPDQT 239
QHKGY+C+DP S +IYISR+V+FDE+ FPFA +K ++ + + + FP +T
Sbjct: 651 QHKGYKCLDPQSRRIYISRNVAFDENLFPFAGQKKASVTTTHTPIILLWLFPSET 705
>ref|XP_017179487.1| PREDICTED: uncharacterized protein LOC108169827 [Malus domestica]
Length = 738
Score = 58.2 bits (139), Expect = 4e-07
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = -3
Query: 400 QHKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASSVFRMQSFPDQT--LHYL 227
Q+KGYRC+ PS+G++Y+SRHV F+E FPF PS+ S + + P T LH
Sbjct: 532 QYKGYRCLHPSTGRVYLSRHVKFNEHDFPFHSSMASPSAPESDLVFVPIHPVPTPLLHQP 591
Query: 226 MAAPPQDNSGSSPTIS 179
PQ+ + T S
Sbjct: 592 PVPMPQNQDLTHTTTS 607
>gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 976
Score = 58.2 bits (139), Expect = 4e-07
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = -3
Query: 397 HKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASSVFRMQSFPDQTLHYLMAA 218
HKGYRC DP ++YISRHV FDE SFPFA K S A+ F D +L AA
Sbjct: 445 HKGYRCFDPIYNRVYISRHVVFDEHSFPFAEKPFVDSCAANLDF----LEDFSLQDQPAA 500
Query: 217 PP 212
PP
Sbjct: 501 PP 502
>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1597
Score = 58.2 bits (139), Expect = 4e-07
Identities = 31/71 (43%), Positives = 39/71 (54%)
Frame = -3
Query: 397 HKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASSVFRMQSFPDQTLHYLMAA 218
HKGYRC+DPS+ ++ ISRHV FDE SFP+A S S++ S P Q A
Sbjct: 871 HKGYRCLDPSTNRVIISRHVVFDEHSFPYANISSPSSADELEFLEDFSAPTQAPIGRRHA 930
Query: 217 PPQDNSGSSPT 185
P +GS T
Sbjct: 931 IPGAGAGSPAT 941
>ref|XP_015388473.1| PREDICTED: uncharacterized protein LOC107178150 [Citrus sinensis]
Length = 407
Score = 57.4 bits (137), Expect = 6e-07
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Frame = -3
Query: 397 HKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASSVFRMQSFPDQTLHYLMAA 218
HKGY+C+ + GKIYI+RHV FDES+FP+ S +AS S Q +H+L
Sbjct: 286 HKGYKCLH-ALGKIYIARHVVFDESTFPYTTDSSFLKHSASDSQSSHSITSQQVHHLSTL 344
Query: 217 P-----PQDNSGSSPTISNE 173
P DNS + ++S+E
Sbjct: 345 PIIPIFLNDNSNNPISVSSE 364
>ref|XP_016559299.1| PREDICTED: uncharacterized protein LOC107858972 [Capsicum annuum]
Length = 1084
Score = 57.4 bits (137), Expect = 7e-07
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Frame = -3
Query: 397 HKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASSVFRMQSFP-----DQTLH 233
H GY+C+D S+G++YI+RHV F+E++FPFA KS + S S P Q
Sbjct: 464 HHGYKCLDTSTGRLYIARHVQFNETTFPFASKSILGPPPSVSTQPWASSPTTLSNSQYFR 523
Query: 232 YLMAAPPQDNSGSSPTISN 176
L+++PP N SSP +++
Sbjct: 524 SLISSPPM-NPNSSPILTS 541
>gb|AAF69172.1|AC007915_24 F27F5.11 [Arabidopsis thaliana]
Length = 1313
Score = 57.0 bits (136), Expect = 1e-06
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -3
Query: 400 QHKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNA 278
++KGYRC PS+G++YISRHV FDE+ FPFA+ P+S +
Sbjct: 661 KYKGYRCFLPSTGRVYISRHVIFDETVFPFAQSHSRPNSGS 701
>gb|PRQ16309.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 461
Score = 56.6 bits (135), Expect = 1e-06
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -3
Query: 394 KGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEP 290
KGYRC+DP++G++Y+SRHV FDE++FPF K P
Sbjct: 352 KGYRCLDPTNGRVYVSRHVIFDENTFPFKEKLSAP 386
>ref|XP_020114563.1| uncharacterized protein LOC109728471 isoform X15 [Ananas comosus]
Length = 890
Score = 56.6 bits (135), Expect = 1e-06
Identities = 29/70 (41%), Positives = 44/70 (62%)
Frame = -3
Query: 400 QHKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASSVFRMQSFPDQTLHYLMA 221
+HKG+RC+ PS+GK++ISRHV+F E+ FP++ S+ SS++ + Q F H+L
Sbjct: 222 KHKGFRCLYPSTGKVFISRHVTFVETVFPYSCLSKFSSSSSPTTSNFQMFQ----HFLSN 277
Query: 220 APPQDNSGSS 191
P S SS
Sbjct: 278 PPLLGESPSS 287
>ref|XP_020114543.1| uncharacterized protein LOC109728471 isoform X12 [Ananas comosus]
Length = 1013
Score = 56.6 bits (135), Expect = 1e-06
Identities = 29/70 (41%), Positives = 44/70 (62%)
Frame = -3
Query: 400 QHKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASSVFRMQSFPDQTLHYLMA 221
+HKG+RC+ PS+GK++ISRHV+F E+ FP++ S+ SS++ + Q F H+L
Sbjct: 345 KHKGFRCLYPSTGKVFISRHVTFVETVFPYSCLSKFSSSSSPTTSNFQMFQ----HFLSN 400
Query: 220 APPQDNSGSS 191
P S SS
Sbjct: 401 PPLLGESPSS 410
>gb|PRQ42184.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1024
Score = 56.6 bits (135), Expect = 1e-06
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -3
Query: 394 KGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEP 290
KGYRC+DP++G++Y+SRHV FDE++FPF K P
Sbjct: 352 KGYRCLDPTNGRVYVSRHVIFDENTFPFKEKLSAP 386
>ref|XP_020114487.1| uncharacterized protein LOC109728471 isoform X3 [Ananas comosus]
Length = 1483
Score = 56.6 bits (135), Expect = 1e-06
Identities = 29/70 (41%), Positives = 44/70 (62%)
Frame = -3
Query: 400 QHKGYRCMDPSSGKIYISRHVSFDESSFPFARKSQEPSSNASSVFRMQSFPDQTLHYLMA 221
+HKG+RC+ PS+GK++ISRHV+F E+ FP++ S+ SS++ + Q F H+L
Sbjct: 815 KHKGFRCLYPSTGKVFISRHVTFVETVFPYSCLSKFSSSSSPTTSNFQMFQ----HFLSN 870
Query: 220 APPQDNSGSS 191
P S SS
Sbjct: 871 PPLLGESPSS 880