BLASTX nr result

ID: Ophiopogon27_contig00027493 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00027493
         (384 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019240594.1| PREDICTED: ribonuclease H-like [Nicotiana at...    53   5e-06
ref|XP_019236957.1| PREDICTED: uncharacterized protein LOC109217...    52   7e-06
ref|XP_019248399.1| PREDICTED: ribonuclease H-like [Nicotiana at...    53   7e-06

>ref|XP_019240594.1| PREDICTED: ribonuclease H-like [Nicotiana attenuata]
          Length = 164

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = +3

Query: 78  YVVFVDRHPGLYFDWHECAVPVIGYKEAIYKQYTTFEVTEIAFLEFLGHSR 230
           YVVF  + PGLY  WH+CA+ VIG K +I+K + T++    AF EF   S+
Sbjct: 13  YVVFRGKRPGLYNSWHQCALMVIGVKGSIFKAFKTYDEAIAAFNEFRNGSQ 63


>ref|XP_019236957.1| PREDICTED: uncharacterized protein LOC109217187 [Nicotiana
           attenuata]
          Length = 121

 Score = 52.0 bits (123), Expect = 7e-06
 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = +3

Query: 78  YVVFVDRHPGLYFDWHECAVPVIGYKEAIYKQYTTFEVTEIAFLEFLGHSRL-NVSGQR 251
           YVVF  + PGLY  WH CA  VIG K +I+K + T++    AF EF   S+  N+S  +
Sbjct: 13  YVVFRGKRPGLYNSWHRCAPMVIGVKGSIFKAFKTYDEAIAAFNEFRNGSQTDNISASK 71


>ref|XP_019248399.1| PREDICTED: ribonuclease H-like [Nicotiana attenuata]
          Length = 163

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
 Frame = +3

Query: 78  YVVFVDRHPGLYFDWHECAVPVIGYKEAIYKQYTTFEVTEIAFLEFLGHSRL-NVSGQR 251
           YVVF  + PGLY  WH+CA  VIG K +I+K + T++    AF EF   S+  N+S  +
Sbjct: 13  YVVFRGKRPGLYNSWHQCAPMVIGVKGSIFKAFKTYDEAIAAFNEFRNGSQADNISASK 71


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