BLASTX nr result

ID: Ophiopogon27_contig00027306 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00027306
         (476 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY06851.1| Uncharacterized protein TCM_021451 isoform 2, par...    52   9e-06

>gb|EOY06851.1| Uncharacterized protein TCM_021451 isoform 2, partial [Theobroma
           cacao]
          Length = 87

 Score = 51.6 bits (122), Expect = 9e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = +1

Query: 217 EEKGKMPSLQTALPHELANNTIRLFRECLRR 309
           + K +MPSLQTALP ELANN IRL+RECLRR
Sbjct: 10  KRKKEMPSLQTALPPELANNVIRLYRECLRR 40


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