BLASTX nr result
ID: Ophiopogon27_contig00027255
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00027255
(999 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus... 75 3e-11
ref|XP_020273292.1| probable RNA polymerase II transcription fac... 75 3e-11
gb|ACF81346.1| unknown [Zea mays] 64 6e-08
gb|AQK50814.1| putative RNA polymerase II transcription factor B... 64 9e-08
gb|AQK50816.1| putative RNA polymerase II transcription factor B... 64 2e-07
ref|NP_001304164.1| uncharacterized protein LOC100193949 [Zea mays] 64 2e-07
gb|AQK50813.1| putative RNA polymerase II transcription factor B... 64 2e-07
gb|AQK50812.1| putative RNA polymerase II transcription factor B... 64 2e-07
gb|AQK50815.1| putative RNA polymerase II transcription factor B... 64 2e-07
gb|ACG24327.1| BSD domain containing protein [Zea mays] 64 2e-07
ref|NP_001304165.1| uncharacterized protein LOC100193949 [Zea ma... 64 2e-07
gb|AQK50811.1| putative RNA polymerase II transcription factor B... 64 2e-07
gb|AQK50809.1| putative RNA polymerase II transcription factor B... 64 2e-07
gb|OAY75989.1| putative RNA polymerase II transcription factor B... 63 2e-07
gb|OAY75981.1| putative RNA polymerase II transcription factor B... 63 3e-07
ref|XP_020679857.1| probable RNA polymerase II transcription fac... 63 4e-07
ref|XP_020679858.1| probable RNA polymerase II transcription fac... 63 4e-07
ref|XP_020586849.1| probable RNA polymerase II transcription fac... 63 4e-07
ref|XP_008789680.1| PREDICTED: probable RNA polymerase II transc... 63 4e-07
ref|XP_020679856.1| probable RNA polymerase II transcription fac... 63 4e-07
>gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus officinalis]
Length = 596
Score = 75.5 bits (184), Expect = 3e-11
Identities = 39/46 (84%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = +3
Query: 21 LRRKDHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
L DHGILRDGT+EVVD D ELSKRSI+QDLNRHAAVVLEGRPLD
Sbjct: 296 LHLPDHGILRDGTKEVVDTDNELSKRSISQDLNRHAAVVLEGRPLD 341
>ref|XP_020273292.1| probable RNA polymerase II transcription factor B subunit 1-1
[Asparagus officinalis]
Length = 605
Score = 75.5 bits (184), Expect = 3e-11
Identities = 39/46 (84%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = +3
Query: 21 LRRKDHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
L DHGILRDGT+EVVD D ELSKRSI+QDLNRHAAVVLEGRPLD
Sbjct: 305 LHLPDHGILRDGTKEVVDTDNELSKRSISQDLNRHAAVVLEGRPLD 350
>gb|ACF81346.1| unknown [Zea mays]
Length = 245
Score = 63.5 bits (153), Expect = 6e-08
Identities = 31/42 (73%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGI RDG++E VDAD EL++R+++QDLNRHAAVVLEGR LD
Sbjct: 75 DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLD 116
>gb|AQK50814.1| putative RNA polymerase II transcription factor B subunit 1-1 [Zea
mays]
Length = 283
Score = 63.5 bits (153), Expect = 9e-08
Identities = 31/42 (73%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGI RDG++E VDAD EL++R+++QDLNRHAAVVLEGR LD
Sbjct: 113 DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLD 154
>gb|AQK50816.1| putative RNA polymerase II transcription factor B subunit 1-1 [Zea
mays]
Length = 392
Score = 63.5 bits (153), Expect = 2e-07
Identities = 31/42 (73%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGI RDG++E VDAD EL++R+++QDLNRHAAVVLEGR LD
Sbjct: 98 DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLD 139
>ref|NP_001304164.1| uncharacterized protein LOC100193949 [Zea mays]
Length = 476
Score = 63.5 bits (153), Expect = 2e-07
Identities = 31/42 (73%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGI RDG++E VDAD EL++R+++QDLNRHAAVVLEGR LD
Sbjct: 306 DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLD 347
>gb|AQK50813.1| putative RNA polymerase II transcription factor B subunit 1-1 [Zea
mays]
Length = 477
Score = 63.5 bits (153), Expect = 2e-07
Identities = 31/42 (73%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGI RDG++E VDAD EL++R+++QDLNRHAAVVLEGR LD
Sbjct: 306 DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLD 347
>gb|AQK50812.1| putative RNA polymerase II transcription factor B subunit 1-1 [Zea
mays]
Length = 481
Score = 63.5 bits (153), Expect = 2e-07
Identities = 31/42 (73%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGI RDG++E VDAD EL++R+++QDLNRHAAVVLEGR LD
Sbjct: 306 DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLD 347
>gb|AQK50815.1| putative RNA polymerase II transcription factor B subunit 1-1 [Zea
mays]
Length = 481
Score = 63.5 bits (153), Expect = 2e-07
Identities = 31/42 (73%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGI RDG++E VDAD EL++R+++QDLNRHAAVVLEGR LD
Sbjct: 306 DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLD 347
>gb|ACG24327.1| BSD domain containing protein [Zea mays]
Length = 600
Score = 63.5 bits (153), Expect = 2e-07
Identities = 31/42 (73%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGI RDG++E VDAD EL++R+++QDLNRHAAVVLEGR LD
Sbjct: 306 DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLD 347
>ref|NP_001304165.1| uncharacterized protein LOC100193949 [Zea mays]
gb|AIB05913.1| BSD transcription factor, partial [Zea mays]
gb|AQK50810.1| putative RNA polymerase II transcription factor B subunit 1-1 [Zea
mays]
Length = 600
Score = 63.5 bits (153), Expect = 2e-07
Identities = 31/42 (73%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGI RDG++E VDAD EL++R+++QDLNRHAAVVLEGR LD
Sbjct: 306 DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLD 347
>gb|AQK50811.1| putative RNA polymerase II transcription factor B subunit 1-1 [Zea
mays]
Length = 607
Score = 63.5 bits (153), Expect = 2e-07
Identities = 31/42 (73%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGI RDG++E VDAD EL++R+++QDLNRHAAVVLEGR LD
Sbjct: 293 DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLD 334
>gb|AQK50809.1| putative RNA polymerase II transcription factor B subunit 1-1 [Zea
mays]
Length = 610
Score = 63.5 bits (153), Expect = 2e-07
Identities = 31/42 (73%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGI RDG++E VDAD EL++R+++QDLNRHAAVVLEGR LD
Sbjct: 316 DHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLD 357
>gb|OAY75989.1| putative RNA polymerase II transcription factor B subunit 1-1
[Ananas comosus]
Length = 416
Score = 63.2 bits (152), Expect = 2e-07
Identities = 29/48 (60%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Frame = +3
Query: 15 MKLRRKDHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
+ + DHGI RDG++E +DAD E+++R+++QDLNRHAAVVLEGR LD
Sbjct: 114 LDMEADDHGIFRDGSKETMDADYEIARRTLSQDLNRHAAVVLEGRALD 161
>gb|OAY75981.1| putative RNA polymerase II transcription factor B subunit 1-1
[Ananas comosus]
Length = 586
Score = 63.2 bits (152), Expect = 3e-07
Identities = 29/48 (60%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Frame = +3
Query: 15 MKLRRKDHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
+ + DHGI RDG++E +DAD E+++R+++QDLNRHAAVVLEGR LD
Sbjct: 284 LDMEADDHGIFRDGSKETMDADYEIARRTLSQDLNRHAAVVLEGRALD 331
>ref|XP_020679857.1| probable RNA polymerase II transcription factor B subunit 1-1
isoform X4 [Dendrobium catenatum]
Length = 476
Score = 62.8 bits (151), Expect = 4e-07
Identities = 30/43 (69%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
Frame = +3
Query: 30 KDHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
+DHG+LRDG +E VDA+ ELS+R+++QDLNRHAAVVLEGR D
Sbjct: 179 QDHGLLRDGGKETVDAESELSRRTLSQDLNRHAAVVLEGRAFD 221
>ref|XP_020679858.1| probable RNA polymerase II transcription factor B subunit 1-1
isoform X5 [Dendrobium catenatum]
gb|PKU66078.1| putative RNA polymerase II transcription factor B subunit 1-1
[Dendrobium catenatum]
Length = 476
Score = 62.8 bits (151), Expect = 4e-07
Identities = 30/43 (69%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
Frame = +3
Query: 30 KDHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
+DHG+LRDG +E VDA+ ELS+R+++QDLNRHAAVVLEGR D
Sbjct: 303 QDHGLLRDGGKETVDAESELSRRTLSQDLNRHAAVVLEGRAFD 345
>ref|XP_020586849.1| probable RNA polymerase II transcription factor B subunit 1-1
isoform X2 [Phalaenopsis equestris]
Length = 477
Score = 62.8 bits (151), Expect = 4e-07
Identities = 30/42 (71%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
+HGILRDG +E +DA+ ELS+R+++QDLNRHAAVVLEGR LD
Sbjct: 305 NHGILRDGIKETIDAENELSRRTLSQDLNRHAAVVLEGRALD 346
>ref|XP_008789680.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X3 [Phoenix dactylifera]
Length = 542
Score = 62.8 bits (151), Expect = 4e-07
Identities = 29/42 (69%), Positives = 39/42 (92%), Gaps = 1/42 (2%)
Frame = +3
Query: 33 DHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
DHGILRDG++E VDA+ ++++R+++QDLNRHAAVVLEGR LD
Sbjct: 244 DHGILRDGSKETVDAENDIARRTLSQDLNRHAAVVLEGRALD 285
>ref|XP_020679856.1| probable RNA polymerase II transcription factor B subunit 1-1
isoform X3 [Dendrobium catenatum]
Length = 556
Score = 62.8 bits (151), Expect = 4e-07
Identities = 30/43 (69%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
Frame = +3
Query: 30 KDHGILRDGTEEVVDAD-ELSKRSIAQDLNRHAAVVLEGRPLD 155
+DHG+LRDG +E VDA+ ELS+R+++QDLNRHAAVVLEGR D
Sbjct: 303 QDHGLLRDGGKETVDAESELSRRTLSQDLNRHAAVVLEGRAFD 345