BLASTX nr result

ID: Ophiopogon27_contig00027224 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00027224
         (445 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK76779.1| uncharacterized protein A4U43_C03F32060 [Asparagu...    77   2e-13
ref|XP_020259177.1| nuclear-pore anchor [Asparagus officinalis]        77   2e-13

>gb|ONK76779.1| uncharacterized protein A4U43_C03F32060 [Asparagus officinalis]
          Length = 2000

 Score = 77.0 bits (188), Expect = 2e-13
 Identities = 50/102 (49%), Positives = 60/102 (58%)
 Frame = -2

Query: 444  DSSQSPQRSTGLKVNDQAAPDSAQSHQKNAAAQERLLASLXXXXXXXXXXXXXXXXXVAT 265
            DSSQSPQ+ T L  +DQ+AP   QS Q++ A +E   AS+                 V T
Sbjct: 1880 DSSQSPQKPTVLNSSDQSAP---QSPQRSVAVREGSPASVPQSSVSERRSPSPNRSVVPT 1936

Query: 264  EMDEPAATRGGGRTITIADRAIENARVRQQSQQARMTATTPP 139
            E DE A TR GGRTI+I +RA ENAR+RQ  QQARM   TPP
Sbjct: 1937 ETDEHAQTRSGGRTISITERARENARLRQ--QQARMNTPTPP 1976


>ref|XP_020259177.1| nuclear-pore anchor [Asparagus officinalis]
          Length = 2046

 Score = 77.0 bits (188), Expect = 2e-13
 Identities = 50/102 (49%), Positives = 60/102 (58%)
 Frame = -2

Query: 444  DSSQSPQRSTGLKVNDQAAPDSAQSHQKNAAAQERLLASLXXXXXXXXXXXXXXXXXVAT 265
            DSSQSPQ+ T L  +DQ+AP   QS Q++ A +E   AS+                 V T
Sbjct: 1926 DSSQSPQKPTVLNSSDQSAP---QSPQRSVAVREGSPASVPQSSVSERRSPSPNRSVVPT 1982

Query: 264  EMDEPAATRGGGRTITIADRAIENARVRQQSQQARMTATTPP 139
            E DE A TR GGRTI+I +RA ENAR+RQ  QQARM   TPP
Sbjct: 1983 ETDEHAQTRSGGRTISITERARENARLRQ--QQARMNTPTPP 2022


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