BLASTX nr result

ID: Ophiopogon27_contig00026735 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00026735
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020682924.1| serine/arginine-rich splicing factor SR45a-l...    53   9e-06

>ref|XP_020682924.1| serine/arginine-rich splicing factor SR45a-like isoform X2
           [Dendrobium catenatum]
          Length = 230

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 8/60 (13%)
 Frame = +3

Query: 39  YELHPCQHENCIDISKSPIQIRLLETIARRSRGRTSTPGKYCGAREK--------RDCGP 194
           YE   C+HE+ I+IS +     +LE IA+R RGRT TPGKY GARE+        R C P
Sbjct: 124 YEPPSCRHEHRINISVTNSNPTILERIAKRRRGRTPTPGKYRGARERSVRRRKLSRSCSP 183


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