BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00026498
         (356 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020264087.1| LOW QUALITY PROTEIN: RNA polymerase II-assoc...    66   5e-14
gb|ONK67596.1| uncharacterized protein A4U43_C05F1730 [Asparagus...    64   3e-13
ref|XP_017701552.1| PREDICTED: RNA polymerase II-associated prot...    60   6e-08
ref|XP_008808674.1| PREDICTED: RNA polymerase II-associated prot...    60   6e-08
ref|XP_010921488.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    50   3e-07

>ref|XP_020264087.1| LOW QUALITY PROTEIN: RNA polymerase II-associated protein 3
           [Asparagus officinalis]
          Length = 471

 Score = 66.2 bits (160), Expect(2) = 5e-14
 Identities = 35/65 (53%), Positives = 44/65 (67%)
 Frame = +2

Query: 161 DGKGANTRAETRELMDGSRGNGSLSSDDNIVMVHQAVGHRKQDLDTSVQDLASRAASRVM 340
           D KG +   E+R+LM+GS G  + SS D  V V + V  RKQDLD S+Q+LASRAASRVM
Sbjct: 266 DSKGTSKEIESRDLMNGSHGTVASSSIDGGVNVQEGVIRRKQDLDASIQNLASRAASRVM 325

Query: 341 ATAIK 355
              +K
Sbjct: 326 XATVK 330



 Score = 38.9 bits (89), Expect(2) = 5e-14
 Identities = 21/52 (40%), Positives = 34/52 (65%)
 Frame = +3

Query: 3   EIAKKNSRASKISSQAKRGTDNSDSAMRGGRKVHSVLGNGSTAAATSLKTGS 158
           EI+KK+S  SK S Q  +  +  D+AM+G + + SV    + A+ATS++TG+
Sbjct: 195 EISKKHSGPSKSSGQGIKRANILDAAMKGVQDLPSVSSTAAMASATSVQTGN 246


>gb|ONK67596.1| uncharacterized protein A4U43_C05F1730 [Asparagus officinalis]
          Length = 251

 Score = 63.5 bits (153), Expect(2) = 3e-13
 Identities = 34/60 (56%), Positives = 42/60 (70%)
 Frame = +2

Query: 161 DGKGANTRAETRELMDGSRGNGSLSSDDNIVMVHQAVGHRKQDLDTSVQDLASRAASRVM 340
           D KG +   E+R+LM+GS G  + SS D  V V + V  RKQDLD S+Q+LASRAASRVM
Sbjct: 189 DSKGTSKEIESRDLMNGSHGTVASSSIDGGVNVQEGVIRRKQDLDASIQNLASRAASRVM 248



 Score = 38.9 bits (89), Expect(2) = 3e-13
 Identities = 21/52 (40%), Positives = 34/52 (65%)
 Frame = +3

Query: 3   EIAKKNSRASKISSQAKRGTDNSDSAMRGGRKVHSVLGNGSTAAATSLKTGS 158
           EI+KK+S  SK S Q  +  +  D+AM+G + + SV    + A+ATS++TG+
Sbjct: 118 EISKKHSGPSKSSGQGIKRANILDAAMKGVQDLPSVSSTAAMASATSVQTGN 169


>ref|XP_017701552.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Phoenix dactylifera]
          Length = 407

 Score = 59.7 bits (143), Expect = 6e-08
 Identities = 38/66 (57%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = +2

Query: 161 DGKGANTRAETRE-LMDGSRGNGSLSSDDNIVMVHQAVGHRKQDLDTSVQDLASRAASRV 337
           D    +T  ETRE L+D SR    LSS + I    Q VGH KQ+L  S+QDLASRAASRV
Sbjct: 211 DTDSESTEKETRERLLDESREGAGLSSSNAITKKDQVVGH-KQELKASMQDLASRAASRV 269

Query: 338 MATAIK 355
           MATA K
Sbjct: 270 MATADK 275


>ref|XP_008808674.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Phoenix dactylifera]
 ref|XP_008808675.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Phoenix dactylifera]
          Length = 416

 Score = 59.7 bits (143), Expect = 6e-08
 Identities = 38/66 (57%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = +2

Query: 161 DGKGANTRAETRE-LMDGSRGNGSLSSDDNIVMVHQAVGHRKQDLDTSVQDLASRAASRV 337
           D    +T  ETRE L+D SR    LSS + I    Q VGH KQ+L  S+QDLASRAASRV
Sbjct: 211 DTDSESTEKETRERLLDESREGAGLSSSNAITKKDQVVGH-KQELKASMQDLASRAASRV 269

Query: 338 MATAIK 355
           MATA K
Sbjct: 270 MATADK 275


>ref|XP_010921488.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated
           protein 3 [Elaeis guineensis]
          Length = 471

 Score = 50.4 bits (119), Expect(2) = 3e-07
 Identities = 37/69 (53%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = +2

Query: 152 RQCDGKGANTRAETRE-LMDGSRGNGSLSSDDNIVMVHQAVGHRKQDLDTSVQDLASRAA 328
           +  D K  +   ETRE L+DGSR   +LSS  N     Q VG  KQ L  S++DLASRAA
Sbjct: 278 KDTDSKSTDVGKETREYLLDGSREGAALSS--NNAKKDQDVGC-KQVLKASMKDLASRAA 334

Query: 329 SRVMATAIK 355
           SRVMATA K
Sbjct: 335 SRVMATAGK 343



 Score = 31.6 bits (70), Expect(2) = 3e-07
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 3   EIAKKNSRASKISSQAKRGTDNSDSAMRGGRKVHSVLGNGSTAAATS 143
           EI+KK     K   Q  +G  NS+   +  R  HSVL N   AAA +
Sbjct: 212 EISKKIRGPLKNPFQGIQGVSNSEMGTKNARGDHSVLSNAQNAAAAA 258