BLASTX nr result

ID: Ophiopogon27_contig00026423 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00026423
         (351 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK55254.1| uncharacterized protein A4U43_UnF5820, partial [A...    79   1e-14
ref|XP_020250210.1| zinc finger CCCH domain-containing protein 1...    79   1e-14

>gb|ONK55254.1| uncharacterized protein A4U43_UnF5820, partial [Asparagus
            officinalis]
          Length = 1474

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
 Frame = +1

Query: 55   PIGGMGGWGLNSASMSNIPNQ---TNASQVPRNPIGGTGG-WGSNSVSAPNIANH----N 210
            P G  GGW  +S SM N+ NQ   +NA+ + RN +   GG WGSNS    N+ N      
Sbjct: 1006 PTGINGGWHTHSTSMPNVENQMSGSNAAHIQRNSVDVPGGGWGSNSSLTLNVTNQIIGFT 1065

Query: 211  AAHGPRSQHIDSLSGMENRSAVFPRNEIISPSNPAVLGCSVPSEQNR 351
            A H  R+Q  D+   M+  SAVFP   +ISPSNPAVLG S  SEQ+R
Sbjct: 1066 APHVQRNQQSDASHVMQAPSAVFPVKGVISPSNPAVLGSS-SSEQSR 1111


>ref|XP_020250210.1| zinc finger CCCH domain-containing protein 19-like [Asparagus
            officinalis]
          Length = 1531

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 50/107 (46%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
 Frame = +1

Query: 55   PIGGMGGWGLNSASMSNIPNQ---TNASQVPRNPIGGTGG-WGSNSVSAPNIANH----N 210
            P G  GGW  +S SM N+ NQ   +NA+ + RN +   GG WGSNS    N+ N      
Sbjct: 1063 PTGINGGWHTHSTSMPNVENQMSGSNAAHIQRNSVDVPGGGWGSNSSLTLNVTNQIIGFT 1122

Query: 211  AAHGPRSQHIDSLSGMENRSAVFPRNEIISPSNPAVLGCSVPSEQNR 351
            A H  R+Q  D+   M+  SAVFP   +ISPSNPAVLG S  SEQ+R
Sbjct: 1123 APHVQRNQQSDASHVMQAPSAVFPVKGVISPSNPAVLGSS-SSEQSR 1168


Top