BLASTX nr result

ID: Ophiopogon27_contig00026297 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00026297
         (666 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP46173.1| Putative ribonuclease H protein At1g65750 family,...    43   2e-06
gb|KYP58774.1| Putative ribonuclease H protein At1g65750 family,...    43   3e-06
ref|XP_020253791.1| uncharacterized protein LOC109830842 [Aspara...    58   4e-06
gb|KYP46318.1| Transposon TX1 uncharacterized [Cajanus cajan]          40   4e-06

>gb|KYP46173.1| Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 353

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = -1

Query: 411 IYGDGKTVRFWMDLWIGKVSLAHSFPRLK 325
           I GDG+T+RFW+D W+G   LA  FPRL+
Sbjct: 93  ILGDGRTIRFWIDKWLGDEILADVFPRLE 121



 Score = 36.6 bits (83), Expect(2) = 2e-06
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -2

Query: 635 LGIINIKWKNIAL*GK*LWKLLSNGDSRWTQLIEHRF 525
           LG+ NI+W N +L GK +W+ L+   S W Q+++ R+
Sbjct: 16  LGVKNIEWFNWSLLGKWVWRGLTQSKSLWVQVVKARY 52


>gb|KYP58774.1| Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 212

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = -1

Query: 411 IYGDGKTVRFWMDLWIGKVSLAHSFPRLKS 322
           I GDG+T+RFW+D W+G   LA  FPRL S
Sbjct: 100 ILGDGRTIRFWIDKWLGDEILADVFPRLFS 129



 Score = 36.6 bits (83), Expect(2) = 3e-06
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -2

Query: 635 LGIINIKWKNIAL*GK*LWKLLSNGDSRWTQLIEHRF 525
           LG+ NI+W N +L GK +W+ L++  S W Q++  R+
Sbjct: 23  LGVKNIEWFNWSLLGKWVWRGLTHSKSLWVQVVRARY 59


>ref|XP_020253791.1| uncharacterized protein LOC109830842 [Asparagus officinalis]
          Length = 1301

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
 Frame = -1

Query: 405  GDGKTVRFWMDLWIGKVSLAHSFPRLKSKRWISIVK------FSLNIG*FKVI**WTLDL 244
            G G+ +RFW D WIG  SL+  FP L      S V       F  N   + ++    +  
Sbjct: 1022 GSGERIRFWEDKWIGHNSLSSLFPSLYQLALSSNVNVRSQGFFRDNAWHWSLLLRRCIPH 1081

Query: 243  TELSMSLNLLILMRIFTFLTLSYDETWMSTFGDGMVREIFFCQVILQFS**RGIGLPFLQ 64
               +   NLL L+  +   T S    W  T  +GM     F Q +L F   RGI  PF +
Sbjct: 1082 MSRTDKSNLLNLIGSYQISTHSDIPIWSLTT-NGMYSVKSFYQ-LLNF---RGIKSPFYK 1136

Query: 63   IIWQNSAPTKVSIIIWL 13
            +IW+N+ P+KVS+ IWL
Sbjct: 1137 VIWKNAIPSKVSVFIWL 1153


>gb|KYP46318.1| Transposon TX1 uncharacterized [Cajanus cajan]
          Length = 863

 Score = 40.4 bits (93), Expect(2) = 4e-06
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = -1

Query: 411 IYGDGKTVRFWMDLWIGKVSLAHSFPRLKS 322
           + GDG +V FW D W+G+V L+ +FPRL S
Sbjct: 716 VIGDGGSVLFWHDRWVGEVILSETFPRLYS 745



 Score = 38.5 bits (88), Expect(2) = 4e-06
 Identities = 16/37 (43%), Positives = 26/37 (70%)
 Frame = -2

Query: 635 LGIINIKWKNIAL*GK*LWKLLSNGDSRWTQLIEHRF 525
           LG+ NI+W NI+L GK +W+ L +  S W+Q++  R+
Sbjct: 639 LGVKNIEWFNISLLGKWVWRGLKSPKSLWSQILSARY 675


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