BLASTX nr result
ID: Ophiopogon27_contig00026268
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00026268
(955 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74302.1| hypothetical protein VITISV_031363 [Vitis vinifera] 363 e-119
ref|XP_024024455.1| uncharacterized protein LOC112092461 [Morus ... 382 e-119
emb|CAN74718.1| hypothetical protein VITISV_006955 [Vitis vinifera] 363 e-116
gb|KYP32635.1| Retrovirus-related Pol polyprotein from transposo... 345 e-114
gb|KYP58030.1| Retrovirus-related Pol polyprotein from transposo... 346 e-114
emb|CAN60490.1| hypothetical protein VITISV_030841 [Vitis vinifera] 356 e-112
gb|KYP59264.1| Retrovirus-related Pol polyprotein from transposo... 339 e-111
gb|KYP34804.1| Retrovirus-related Pol polyprotein from transposo... 336 e-111
ref|XP_011656225.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r... 349 e-111
emb|CAN70893.1| hypothetical protein VITISV_039826 [Vitis vinifera] 343 e-111
emb|CAN65575.1| hypothetical protein VITISV_001033 [Vitis vinifera] 337 e-110
emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera] 358 e-110
emb|CAN79075.1| hypothetical protein VITISV_007707 [Vitis vinifera] 347 e-110
gb|KYP59539.1| Retrovirus-related Pol polyprotein from transposo... 337 e-109
gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposo... 356 e-109
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera] 358 e-109
gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposo... 356 e-109
gb|KYP31883.1| Retrovirus-related Pol polyprotein from transposo... 348 e-109
gb|KYP53827.1| Retrovirus-related Pol polyprotein from transposo... 338 e-108
gb|KYP77343.1| Retrovirus-related Pol polyprotein from transposo... 343 e-108
>emb|CAN74302.1| hypothetical protein VITISV_031363 [Vitis vinifera]
Length = 556
Score = 363 bits (933), Expect = e-119
Identities = 177/307 (57%), Positives = 221/307 (71%), Gaps = 1/307 (0%)
Frame = -3
Query: 920 EDRRKARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSPL 741
E +K +W+LDSGCSRHMT D + F L+++ GG VTFGD+ KG+IIG N+ G S L
Sbjct: 124 EGSKKVKWFLDSGCSRHMTGDESKFXFLTKRK-GGYVTFGDNEKGRIIGQDNIGNGTSSL 182
Query: 740 IEDVALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFD-EVDNCIFIGNRDNNVYTIDML 564
IE V LVDGLKHNLLSISQLCDKGFKVIF S C + D + D IF+G R +NVY I++
Sbjct: 183 IESVLLVDGLKHNLLSISQLCDKGFKVIFEASHCIIKDIQNDKTIFMGXRCDNVYAINIS 242
Query: 563 NLSSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFG 384
C S++++ WLWHRRLGHA+ D +S++ ++++G+PK+ F+KDKVC+ CQ G
Sbjct: 243 KYDGHDRCFSSMHDQSWLWHRRLGHANMDLISQLNKDELVRGLPKINFQKDKVCEXCQMG 302
Query: 383 KQHKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNK 204
KQ K SFK I+TTRPL+L+HMDLFGP++T SL G YAF +VDDF+R+TWVFFL K
Sbjct: 303 KQIKNSFKNKXFISTTRPLELLHMDLFGPSRTPSLGGKSYAFFIVDDFSRYTWVFFLSQK 362
Query: 203 DEAFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQN 24
+EAF S FC +V+ EK F I IRS G EF N DF +C EHGI H S PRTPQQN
Sbjct: 363 NEAFYEVSKFCNKVQNEKGFTITCIRSYHGREFQNIDFEDYCNEHGINHNFSAPRTPQQN 422
Query: 23 GVVERKN 3
GVVERKN
Sbjct: 423 GVVERKN 429
>ref|XP_024024455.1| uncharacterized protein LOC112092461 [Morus notabilis]
Length = 1385
Score = 382 bits (982), Expect = e-119
Identities = 181/303 (59%), Positives = 230/303 (75%), Gaps = 1/303 (0%)
Frame = -3
Query: 908 KARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSPLIEDV 729
K +W+LDSGCS+HMT D++ + +RK+ GG VTFGD++KGKI+G G+V SPLIE+V
Sbjct: 446 KVKWFLDSGCSKHMTGDLSLLKNFTRKN-GGRVTFGDNTKGKILGVGDVGNSASPLIENV 504
Query: 728 ALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDN-CIFIGNRDNNVYTIDMLNLSS 552
LVD LKHNLLSISQLCDKG++V+F S C + + +N +FIG+R NVYTID+ LS
Sbjct: 505 FLVDNLKHNLLSISQLCDKGYRVVFESSKCLIENVCNNEVVFIGDRSENVYTIDIEKLSY 564
Query: 551 SISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQHK 372
CLS +N+D WLWHRRLGHAS LS++ K++++G+P L F+KDK+CDACQFGKQ +
Sbjct: 565 KNQCLSVLNDDSWLWHRRLGHASMHLLSKLSRKEVVRGLPNLPFQKDKICDACQFGKQVR 624
Query: 371 VSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDEAF 192
SFK++ +I+TTRPL L+HMDLFGP++T SL G YAFV+VDDF+R+TWV FL KDEA
Sbjct: 625 TSFKSILEISTTRPLQLLHMDLFGPSRTTSLGGKHYAFVIVDDFSRYTWVIFLATKDEAL 684
Query: 191 SRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQNGVVE 12
F FCKRV+ E+ + I I+SD GGEF N F T C E+G KH S PRTPQQNGVVE
Sbjct: 685 KTFLYFCKRVQNEQGYLITTIKSDHGGEFDNDAFETLCNENGYKHNFSTPRTPQQNGVVE 744
Query: 11 RKN 3
RKN
Sbjct: 745 RKN 747
>emb|CAN74718.1| hypothetical protein VITISV_006955 [Vitis vinifera]
Length = 855
Score = 363 bits (932), Expect = e-116
Identities = 177/313 (56%), Positives = 225/313 (71%), Gaps = 1/313 (0%)
Frame = -3
Query: 938 IQVQNKEDRRKARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVK 759
+ V+ + +K +W+LDSG SRHMT D + F L+++ GG V FGD+SKG+I+G GN+
Sbjct: 364 VWVEKSKGSKKDKWFLDSGWSRHMTGDESKFAFLTKRK-GGYVAFGDNSKGRIVGQGNIS 422
Query: 758 IGNSPLIEDVALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFD-EVDNCIFIGNRDNNV 582
S LIE V LVDGLKHNLLSISQLCDKGFKVIF S C + D + D IFIG+R +NV
Sbjct: 423 NDTSSLIESVLLVDGLKHNLLSISQLCDKGFKVIFEASHCIIKDIQNDKTIFIGHRCDNV 482
Query: 581 YTIDMLNLSSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVC 402
Y I++ C S++++ WLWHRRLGHA+ D +S++ ++++G+PK+ F+KDKVC
Sbjct: 483 YAINISKYDGHDRCFSSMHDQSWLWHRRLGHANMDLISQLNKDELVRGLPKINFQKDKVC 542
Query: 401 DACQFGKQHKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWV 222
+ACQ GKQ K SFK I+TTRPL+L+H DLFGP++T SL G YAFV+VDDF+R+TWV
Sbjct: 543 EACQMGKQIKNSFKNKNFISTTRPLELLHXDLFGPSRTPSLGGKSYAFVIVDDFSRYTWV 602
Query: 221 FFLKNKDEAFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCP 42
FL K+EAF FS FC +V+ EK F I IRSD G EF N DF +C EHGI H S P
Sbjct: 603 LFLSQKNEAFYEFSKFCNKVQNEKGFTITCIRSDHGREFENIDFEDYCNEHGINHNFSXP 662
Query: 41 RTPQQNGVVERKN 3
RT QQNGVVERKN
Sbjct: 663 RTLQQNGVVERKN 675
>gb|KYP32635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 375
Score = 345 bits (884), Expect = e-114
Identities = 176/305 (57%), Positives = 218/305 (71%), Gaps = 6/305 (1%)
Frame = -3
Query: 899 WYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSP---LIEDV 729
WYLDSGCSRHMT D + F +L K++G VT+GD++KG+I+G GN IGNS LIE+V
Sbjct: 1 WYLDSGCSRHMTGDPSKFSSLKLKNEGN-VTYGDNNKGRILGHGN--IGNSSSLTLIENV 57
Query: 728 ALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDNCI-FIGNRDNNVYTIDMLN--L 558
LV+GLKHNLLSISQL DKGFK+ F +CC + D+ I FIG R +N+Y +D+ +
Sbjct: 58 LLVEGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKTKEIRFIGKRIDNIYMLDLEHSIA 117
Query: 557 SSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQ 378
S+ CL ++ WLWHRR H DHL+++ K+++ G+PKL+F KDK+CDACQ GKQ
Sbjct: 118 ISNTKCLITKEDNIWLWHRRAAHIHMDHLNKLSRKELVIGLPKLKFSKDKLCDACQKGKQ 177
Query: 377 HKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDE 198
K SFK I+TTRPL LIHMDLFG ++T+SL GN Y V+VDD++RFTWV FL NK+E
Sbjct: 178 VKASFKRKNQISTTRPLQLIHMDLFGFSRTRSLGGNYYGLVIVDDYSRFTWVMFLVNKNE 237
Query: 197 AFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQNGV 18
AF+ F F K V+ EKN I IRSD GGEF F FCEEHGI H S PRTPQQNGV
Sbjct: 238 AFNAFKKFSKLVQNEKNLNITSIRSDHGGEFQKILFQKFCEEHGISHNFSAPRTPQQNGV 297
Query: 17 VERKN 3
VERKN
Sbjct: 298 VERKN 302
>gb|KYP58030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 446
Score = 346 bits (888), Expect = e-114
Identities = 176/305 (57%), Positives = 219/305 (71%), Gaps = 6/305 (1%)
Frame = -3
Query: 899 WYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSP---LIEDV 729
WYLDSGCSRHMT D + F +L K++G VT+GD++KG+I+G GNV GNS LIE+V
Sbjct: 1 WYLDSGCSRHMTEDPSKFSSLKLKNEGH-VTYGDNNKGRILGHGNV--GNSSSQTLIENV 57
Query: 728 ALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDNCI-FIGNRDNNVYTIDMLN--L 558
LVDGLKHNLLSISQL DKGFK+ F +CC + D+ I FIG R +N+Y +D+ N
Sbjct: 58 LLVDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKTKEIRFIGKRIDNIYMLDLENSIA 117
Query: 557 SSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQ 378
S+ CL ++ WLWHRR H DHL+++ K+++ +PKL+F KDK+CDACQ GKQ
Sbjct: 118 ISNTKCLITQEDNIWLWHRRAAHIHMDHLNKLSRKELVVELPKLKFSKDKLCDACQKGKQ 177
Query: 377 HKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDE 198
K SFK+ I+TTRPL LIHMDLFGP++T SL GN Y V+VDD++R+TWV FL NK++
Sbjct: 178 VKASFKSKNQISTTRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMFLANKND 237
Query: 197 AFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQNGV 18
AF+ F F K V+ EK+ I IRSD GGEF N F FCEEHGI H S PRTPQQNGV
Sbjct: 238 AFNAFRKFAKLVQNEKSSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTPQQNGV 297
Query: 17 VERKN 3
VERKN
Sbjct: 298 VERKN 302
>emb|CAN60490.1| hypothetical protein VITISV_030841 [Vitis vinifera]
Length = 1000
Score = 356 bits (913), Expect = e-112
Identities = 173/310 (55%), Positives = 223/310 (71%), Gaps = 1/310 (0%)
Frame = -3
Query: 929 QNKEDRRKARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGN 750
Q + ++ +W+LDSGCSRHMT D + F L+++ GG VTFGD++KG+IIG GN+ G
Sbjct: 523 QKNSNAKEDKWFLDSGCSRHMTGDESKFAFLTKRK-GGYVTFGDNAKGRIIGQGNIGNGT 581
Query: 749 SPLIEDVALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDN-CIFIGNRDNNVYTI 573
S LIE V LVDGLKHNLLSISQLCDKGFKVIF S C + D +N IF+G+R NVY I
Sbjct: 582 SSLIESVLLVDGLKHNLLSISQLCDKGFKVIFEASHCIIKDIQNNKTIFMGHRCENVYGI 641
Query: 572 DMLNLSSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDAC 393
++ C S++++ WLWHRRLGHA+ D +S++ ++++G+PK F+KDKV +AC
Sbjct: 642 NISKYDGHDRCFSSMHDQSWLWHRRLGHANMDLISQLNKDELVRGLPKTNFQKDKVYEAC 701
Query: 392 QFGKQHKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFL 213
Q GKQ K +FK I+T+RPL+L+HMDLFGP++T SL G YA+V+VDDF+R+TWV FL
Sbjct: 702 QMGKQIKNTFKNKNFISTSRPLELLHMDLFGPSRTPSLRGKSYAYVIVDDFSRYTWVLFL 761
Query: 212 KNKDEAFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTP 33
K EAF FS FC +V+ +K F I IRSD G EF N DF +C +HGI H S RTP
Sbjct: 762 SQKSEAFYEFSKFCNKVQNKKGFTITCIRSDHGREFENFDFEEYCNKHGINHNFSALRTP 821
Query: 32 QQNGVVERKN 3
QQNGVVERKN
Sbjct: 822 QQNGVVERKN 831
>gb|KYP59264.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 438
Score = 339 bits (869), Expect = e-111
Identities = 169/303 (55%), Positives = 215/303 (70%), Gaps = 4/303 (1%)
Frame = -3
Query: 899 WYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNV-KIGNSPLIEDVAL 723
WYLDS CSRHMT D + F +L K++G VT+GD++KGKI+G GN+ +S LIE+V L
Sbjct: 134 WYLDSSCSRHMTGDPSKFSSLKLKNEG-FVTYGDNNKGKILGHGNIGNSSSSTLIENVLL 192
Query: 722 VDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDNCI-FIGNRDNNVYTIDMLN--LSS 552
V+GLKHNLLSISQL DKGFK+ F +CC + D++ I FIG R +N+Y +D+ + S
Sbjct: 193 VEGLKHNLLSISQLSDKGFKIKFDNTCCLICDKLTKEIRFIGKRIDNIYMLDLEHSITIS 252
Query: 551 SISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQHK 372
+ CL ++ WLWHRR H DHL+++ K+++ G+PKL+F KDK+CDACQ GKQ K
Sbjct: 253 NTKCLITKEDNIWLWHRRAAHIHMDHLNKLSRKELVIGLPKLKFSKDKLCDACQKGKQVK 312
Query: 371 VSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDEAF 192
SFK+ I+T+RPL LIHMD FGP++T SL GN Y V+VDD++RFTWV FL NK EAF
Sbjct: 313 ASFKSKNMISTSRPLQLIHMDFFGPSRTMSLGGNYYGLVMVDDYSRFTWVMFLANKSEAF 372
Query: 191 SRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQNGVVE 12
+ F F K V+ EKN I IRSD GGEF N F FCEEH I H + P+ PQQNGVVE
Sbjct: 373 NAFKKFAKLVQNEKNINITSIRSDHGGEFQNVLFQKFCEEHDINHNILAPKIPQQNGVVE 432
Query: 11 RKN 3
RKN
Sbjct: 433 RKN 435
>gb|KYP34804.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 364
Score = 336 bits (861), Expect = e-111
Identities = 172/305 (56%), Positives = 216/305 (70%), Gaps = 6/305 (1%)
Frame = -3
Query: 899 WYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSP---LIEDV 729
WYLDSGCSRHMT D + F +L K++G VT+GD++KG+I+G GN IGNS LIE+V
Sbjct: 1 WYLDSGCSRHMTGDPSKFSSLKLKNEG-FVTYGDNNKGRILGHGN--IGNSSSLTLIENV 57
Query: 728 ALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDNCI-FIGNRDNNVYTIDMLN--L 558
LV+GLKHNLLSISQL DKGFK+ F +CC + D+ I F G R +N+Y +D+ +
Sbjct: 58 LLVEGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKTKEIRFNGKRIDNIYMLDLEHSIA 117
Query: 557 SSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQ 378
S+ CL ++ WLWHRR H DHL+++ K+++ G+PKL+F KDK+CDACQ GKQ
Sbjct: 118 ISNTMCLITKEDNIWLWHRRAAHIHMDHLNKLSRKELVIGLPKLKFSKDKLCDACQKGKQ 177
Query: 377 HKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDE 198
K FK+ I+TTRPL LIHMDLFGP++T SL+GN Y V+VDD++RFTWV FL +K+E
Sbjct: 178 VKARFKSKNHISTTRPLQLIHMDLFGPSRTMSLSGNYYGLVIVDDYSRFTWVMFLASKNE 237
Query: 197 AFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQNGV 18
AF+ F K + EKN I IRSD G EF N F FCEEHGI H S PRTPQQNGV
Sbjct: 238 AFNAIKKFSKLFQNEKNTNITSIRSDHGDEFQNILFQKFCEEHGINHNFSAPRTPQQNGV 297
Query: 17 VERKN 3
VERKN
Sbjct: 298 VERKN 302
>ref|XP_011656225.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Cucumis sativus]
Length = 794
Score = 349 bits (895), Expect = e-111
Identities = 172/297 (57%), Positives = 211/297 (71%), Gaps = 1/297 (0%)
Frame = -3
Query: 911 RKARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSPLIED 732
+K +WYLDSGCSRH T D + S+K+ GG VTFGD+ KGKIIG GN+ +S LIE+
Sbjct: 22 KKNKWYLDSGCSRHXTGDRSKLIPFSKKN-GGMVTFGDNKKGKIIGKGNIGNDSSTLIEN 80
Query: 731 VALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDN-CIFIGNRDNNVYTIDMLNLS 555
V LVDGLKH+LLSISQLCDKGF+VIF C + + D +F+GNRD NVYT+D+ +
Sbjct: 81 VHLVDGLKHDLLSISQLCDKGFRVIFDKRNCIIENVSDRKVLFVGNRDENVYTLDLNDYP 140
Query: 554 SSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQH 375
CLS ++ D WLWHRRLGHAS +S I +++G+P +FEKDKVCDACQ GKQ
Sbjct: 141 IIDKCLSVLHNDSWLWHRRLGHASMHLISNISKNCLVRGLPSFKFEKDKVCDACQMGKQT 200
Query: 374 KVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDEA 195
K SFK+ I+T RPL L+HMDLFGP++ S GN YAFV+VDDF+RFTWV +K+KD+A
Sbjct: 201 KSSFKSKNVISTARPLQLLHMDLFGPSRIASYGGNYYAFVIVDDFSRFTWVLMIKHKDDA 260
Query: 194 FSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQN 24
F F KRV+ EK F I +IRSD GGEF N F FCEE+G H S PRTPQQN
Sbjct: 261 LKSFISFAKRVQNEKGFFISKIRSDHGGEFDNDAFKAFCEENGFSHNFSSPRTPQQN 317
>emb|CAN70893.1| hypothetical protein VITISV_039826 [Vitis vinifera]
Length = 594
Score = 343 bits (879), Expect = e-111
Identities = 167/301 (55%), Positives = 214/301 (71%), Gaps = 1/301 (0%)
Frame = -3
Query: 920 EDRRKARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSPL 741
E +K +W+LDSGCSRHMT D + F L+++ GG VTFGD++KG+IIG GN+ G S L
Sbjct: 103 EGSKKDKWFLDSGCSRHMTGDESKFAFLTKRK-GGYVTFGDNAKGRIIGQGNIGNGTSSL 161
Query: 740 IEDVALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFD-EVDNCIFIGNRDNNVYTIDML 564
IE V LVDGLKHNLLSISQLCDKGFKVIF S C + D + D IF+G+R +NV I++
Sbjct: 162 IESVLLVDGLKHNLLSISQLCDKGFKVIFEASHCIIKDIQNDKTIFMGHRCDNVDAINIS 221
Query: 563 NLSSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFG 384
C S++++ WLWHRRLG+A+ D +S++ ++KG+ K+ F+KD VC+ACQ G
Sbjct: 222 KYDGHDRCFSSMHDQSWLWHRRLGYANMDLISQLNKDKLVKGLSKVNFQKDNVCEACQMG 281
Query: 383 KQHKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNK 204
KQ K SFK I+TTRPL+L+HMDLFGP++T SL G YA+ +VDDF+R+TWV FL K
Sbjct: 282 KQIKNSFKNKNFISTTRPLELLHMDLFGPSRTPSLGGKSYAYDIVDDFSRYTWVLFLSQK 341
Query: 203 DEAFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQN 24
+E F F FC +V+ EK F I IRSD G EF N DF +C +HGI H S PRTPQQN
Sbjct: 342 NETFYEFLKFCNKVQNEKGFTITCIRSDHGREFENIDFEDYCNKHGINHNFSAPRTPQQN 401
Query: 23 G 21
G
Sbjct: 402 G 402
>emb|CAN65575.1| hypothetical protein VITISV_001033 [Vitis vinifera]
Length = 440
Score = 337 bits (864), Expect = e-110
Identities = 169/310 (54%), Positives = 218/310 (70%), Gaps = 1/310 (0%)
Frame = -3
Query: 929 QNKEDRRKARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGN 750
Q +E +K +W+LDSGCSR+MT D + F L +K GG VTFGD++KG+IIG GN+
Sbjct: 51 QLEEGSKKDKWFLDSGCSRYMTGDESKFSXLIKKX-GGYVTFGDNAKGRIIGQGNIGNDT 109
Query: 749 SPLIEDVALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFD-EVDNCIFIGNRDNNVYTI 573
S LIE V LVDGLKH LLSISQLC+KGFKVIF S C + D + D IF+G+R +NVY I
Sbjct: 110 SSLIESVLLVDGLKHILLSISQLCEKGFKVIFEASHCIIKDIQNDKTIFMGHRCDNVYAI 169
Query: 572 DMLNLSSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDAC 393
++ C S++++ WLWH RLGHA+ D +S++ ++++G+PKL F+KDKVC+A
Sbjct: 170 NISKYDGYDRCFSSMHDQSWLWHXRLGHANMDLISQLNKYELVRGLPKLNFKKDKVCEAY 229
Query: 392 QFGKQHKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFL 213
GK K SFK I+ +RPL+L+HMDLFGP++T SL G +A+V+VDD +R+TWV FL
Sbjct: 230 XVGKXIKNSFKNKNFISXSRPLELLHMDLFGPSRTPSLGGKSHAYVIVDDXSRYTWVLFL 289
Query: 212 KNKDEAFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTP 33
K+EAF FS FC V+ EK+F I IRSD G EF N DF +C EHGI H S RT
Sbjct: 290 SQKNEAFYEFSKFCNNVQNEKDFTITCIRSDHGREFENIDFEEYCNEHGINHNFSASRTL 349
Query: 32 QQNGVVERKN 3
QQNGVVERKN
Sbjct: 350 QQNGVVERKN 359
>emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]
Length = 1409
Score = 358 bits (920), Expect = e-110
Identities = 176/313 (56%), Positives = 224/313 (71%), Gaps = 1/313 (0%)
Frame = -3
Query: 938 IQVQNKEDRRKARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVK 759
+ V+ + K +W+LDSGCSRHM + + F L+++ GG VTFG++SKG IIG GN+
Sbjct: 451 VWVEKSKGSMKDKWFLDSGCSRHMIGNESKFAFLTKRK-GGYVTFGENSKGMIIGQGNIG 509
Query: 758 IGNSPLIEDVALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFD-EVDNCIFIGNRDNNV 582
G S LIE V LVDGLK+N+LSISQLCDKGFKVIF S C + D + D IF+G+R +NV
Sbjct: 510 NGTSSLIESVLLVDGLKYNILSISQLCDKGFKVIFEASHCIIKDIQNDKTIFMGHRCDNV 569
Query: 581 YTIDMLNLSSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVC 402
Y I++ C S+ ++ WLWHRRLGHA+ D +S++ ++++G+PK+ F+KDKVC
Sbjct: 570 YAINISKYDGHDRCFSSKHDQSWLWHRRLGHANMDLISQLNKDELVRGLPKINFQKDKVC 629
Query: 401 DACQFGKQHKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWV 222
+ACQ GKQ K SFK I TTRPL+L+HMDLFG ++T SL G YAFV+VDDF+R+TWV
Sbjct: 630 EACQMGKQIKNSFKNKNFILTTRPLELLHMDLFGLSRTPSLGGKSYAFVIVDDFSRYTWV 689
Query: 221 FFLKNKDEAFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCP 42
FL K+EAF FS FC +V+ EK F I IRSD G EF N DF +C EHGI H S P
Sbjct: 690 LFLSQKNEAFYEFSKFCNKVQNEKGFTITCIRSDHGREFENIDFEGYCNEHGINHNFSAP 749
Query: 41 RTPQQNGVVERKN 3
RTPQQNGVVERKN
Sbjct: 750 RTPQQNGVVERKN 762
>emb|CAN79075.1| hypothetical protein VITISV_007707 [Vitis vinifera]
Length = 836
Score = 347 bits (891), Expect = e-110
Identities = 169/313 (53%), Positives = 219/313 (69%), Gaps = 1/313 (0%)
Frame = -3
Query: 938 IQVQNKEDRRKARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVK 759
+ V+ + +W+LDSGCSRH+ D + F L+++ G VTFG+++KG+IIG GN+
Sbjct: 522 VWVEKSKGSNNDKWFLDSGCSRHIIGDESKFAFLTKRKXG-YVTFGBNAKGRIIGQGNIG 580
Query: 758 IGNSPLIEDVALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFD-EVDNCIFIGNRDNNV 582
G S LIE V LVD LKHNLLSISQLCDKGFKVIF S C + D + D IF+G+ + V
Sbjct: 581 NGTSSLIESVLLVDDLKHNLLSISQLCDKGFKVIFEASHCIIKDIQNDQTIFMGHXCDYV 640
Query: 581 YTIDMLNLSSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVC 402
Y I++ C S +++ WLWHRRLGHA+ + +S++ ++++G+PK+ F+KDKVC
Sbjct: 641 YAINISKYDGHDRCFSRMHDQSWLWHRRLGHANMNLISQLNKDELVRGLPKINFQKDKVC 700
Query: 401 DACQFGKQHKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWV 222
++CQ KQ K SFK I+TT+PL+L+HMDLFGP +T SL G YAFV+VDDF R+TWV
Sbjct: 701 ESCQMKKQIKNSFKNKNFISTTKPLELLHMDLFGPFRTPSLGGKSYAFVIVDDFFRYTWV 760
Query: 221 FFLKNKDEAFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCP 42
FL K+EAF FS FC +V+ EK F I IRSD G EF N DF +C EHGI H S P
Sbjct: 761 LFLSQKNEAFYEFSKFCNKVQNEKGFTITCIRSDHGREFENIDFEDYCNEHGINHNFSAP 820
Query: 41 RTPQQNGVVERKN 3
RTPQQNGVVERKN
Sbjct: 821 RTPQQNGVVERKN 833
>gb|KYP59539.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
gb|KYP59550.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 540
Score = 337 bits (865), Expect = e-109
Identities = 172/303 (56%), Positives = 215/303 (70%), Gaps = 4/303 (1%)
Frame = -3
Query: 899 WYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNV-KIGNSPLIEDVAL 723
WYLDSGCSRHMT D + F +L K++G VT+GD++KGKI+G GNV +S IE+V L
Sbjct: 208 WYLDSGCSRHMTGDPSKFSSLKLKNEG-FVTYGDNNKGKILGCGNVGNSSSSTFIENVLL 266
Query: 722 VDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDNCI-FIGNRDNNVYTIDMLN--LSS 552
V+GLKHNLLSISQL DKGFK+ F S C +F ++ I FIG R NN+Y +D+ + S
Sbjct: 267 VEGLKHNLLSISQLSDKGFKIEFDNSYCLIFHKLTKEIRFIGKRINNIYMLDLEHSITIS 326
Query: 551 SISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQHK 372
S CL ++ WLWHRR GH +HL+++ K+++ G+PKL+F KDK+CDACQ GKQ K
Sbjct: 327 STKCLITKEDNVWLWHRRAGHIHMNHLNKLSRKELVIGLPKLKFSKDKLCDACQKGKQVK 386
Query: 371 VSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDEAF 192
SFK+ I+T+RPL LIHM+LFGP++T SL GN Y V+VDD++RFTWV FL K +AF
Sbjct: 387 ASFKSKNLISTSRPLQLIHMNLFGPSRTMSLGGNYYGLVMVDDYSRFTWVMFLATKSDAF 446
Query: 191 SRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQNGVVE 12
+ F K V+ EKN I IRSD GGEF N F F EEHGI H S PRTPQQNGVVE
Sbjct: 447 NAFKKLAKLVQNEKNINITSIRSDHGGEFQNVLFQKFYEEHGIDHNFSAPRTPQQNGVVE 506
Query: 11 RKN 3
RKN
Sbjct: 507 RKN 509
>gb|KYP35691.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
gb|KYP38474.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1482
Score = 356 bits (914), Expect = e-109
Identities = 169/304 (55%), Positives = 226/304 (74%), Gaps = 1/304 (0%)
Frame = -3
Query: 911 RKARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSPLIED 732
+++ WYLDSGCSRHMT D + F +L K +GG+VT+GD++KG+I+G G+V ++ LIE+
Sbjct: 470 KQSMWYLDSGCSRHMTGDKSKFISLQEK-EGGSVTYGDNNKGRILGSGSVGNNSNTLIEN 528
Query: 731 VALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDN-CIFIGNRDNNVYTIDMLNLS 555
V V+GLK+NLLSISQLCDK + + F CC V D+ N + IG R NN+Y +D L S
Sbjct: 529 VLYVEGLKYNLLSISQLCDKNYNISFNNQCCMVCDKESNEVLLIGKRVNNIYILD-LEHS 587
Query: 554 SSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQH 375
SS SCL++ + WLWHRR+ H + D L+R+ SKD++ G+PK++F K +CDACQ GKQ
Sbjct: 588 SSNSCLTSHDNVTWLWHRRIAHINADQLNRLASKDLVSGLPKIKFSKQGLCDACQKGKQT 647
Query: 374 KVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDEA 195
+ SFK+ K ++T+RPL+L+HMDLFGP++TKSL GN YA VL+DD++RFTWV F+ +KD A
Sbjct: 648 RASFKSKKVMSTSRPLELLHMDLFGPSRTKSLGGNTYALVLIDDYSRFTWVAFISHKDNA 707
Query: 194 FSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQNGVV 15
F F + KR++ EK+ I +RSD GGEF N F TFCEE+GI H S PRTPQQNGVV
Sbjct: 708 FKAFRIISKRIQNEKDLKIKSLRSDHGGEFQNESFQTFCEENGINHNFSVPRTPQQNGVV 767
Query: 14 ERKN 3
ERKN
Sbjct: 768 ERKN 771
>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
Length = 1885
Score = 358 bits (919), Expect = e-109
Identities = 174/309 (56%), Positives = 224/309 (72%), Gaps = 1/309 (0%)
Frame = -3
Query: 926 NKEDRRKARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNS 747
+KED+ W+LDSGCSRHMT D + F L+++ GG VTFGD++KG+IIG GN+ G S
Sbjct: 469 SKEDK----WFLDSGCSRHMTGDESKFAFLTKRK-GGYVTFGDNAKGRIIGQGNIGNGTS 523
Query: 746 PLIEDVALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFD-EVDNCIFIGNRDNNVYTID 570
LIE V LVDGLKHNLLSISQLC+KGFKVIF S C + D + D IF+G+R NVY I+
Sbjct: 524 SLIESVLLVDGLKHNLLSISQLCNKGFKVIFEASHCIIKDIQNDKTIFMGHRCENVYAIN 583
Query: 569 MLNLSSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQ 390
+ C S++++ WLWHRRLGHA+ D +S++ ++++G+PK+ F+KDK+C+ACQ
Sbjct: 584 ISKYDGHDRCFSSMHDQSWLWHRRLGHANMDLISQLNKDELVRGLPKINFQKDKICEACQ 643
Query: 389 FGKQHKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLK 210
GKQ K SFK I+T+RPL+L+HMDLFGP++T SL G YA+V+VDDF+R+TWV FL
Sbjct: 644 MGKQIKNSFKNKNFISTSRPLELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWVLFLS 703
Query: 209 NKDEAFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQ 30
K EAF FS FC +V+ EK F I IRSD G EF N DF +C ++GI H PRT Q
Sbjct: 704 QKSEAFYEFSKFCNKVQNEKGFSITCIRSDHGREFENFDFEEYCNKYGINHNFLAPRTSQ 763
Query: 29 QNGVVERKN 3
QNGVVERKN
Sbjct: 764 QNGVVERKN 772
>gb|KYP37030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
gb|KYP55193.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1530
Score = 356 bits (914), Expect = e-109
Identities = 169/304 (55%), Positives = 226/304 (74%), Gaps = 1/304 (0%)
Frame = -3
Query: 911 RKARWYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSPLIED 732
+++ WYLDSGCSRHMT D + F +L K +GG+VT+GD++KG+I+G G+V ++ LIE+
Sbjct: 518 KQSMWYLDSGCSRHMTGDKSKFISLQEK-EGGSVTYGDNNKGRILGSGSVGNNSNTLIEN 576
Query: 731 VALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDN-CIFIGNRDNNVYTIDMLNLS 555
V V+GLK+NLLSISQLCDK + + F CC V D+ N + IG R NN+Y +D L S
Sbjct: 577 VLYVEGLKYNLLSISQLCDKNYNISFNNQCCMVCDKESNEVLLIGKRVNNIYILD-LEHS 635
Query: 554 SSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQH 375
SS SCL++ + WLWHRR+ H + D L+R+ SKD++ G+PK++F K +CDACQ GKQ
Sbjct: 636 SSNSCLTSHDNVTWLWHRRIAHINADQLNRLASKDLVSGLPKIKFSKQGLCDACQKGKQT 695
Query: 374 KVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDEA 195
+ SFK+ K ++T+RPL+L+HMDLFGP++TKSL GN YA VL+DD++RFTWV F+ +KD A
Sbjct: 696 RASFKSKKVMSTSRPLELLHMDLFGPSRTKSLGGNTYALVLIDDYSRFTWVAFISHKDNA 755
Query: 194 FSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQNGVV 15
F F + KR++ EK+ I +RSD GGEF N F TFCEE+GI H S PRTPQQNGVV
Sbjct: 756 FKAFRIISKRIQNEKDLKIKSLRSDHGGEFQNESFQTFCEENGINHNFSVPRTPQQNGVV 815
Query: 14 ERKN 3
ERKN
Sbjct: 816 ERKN 819
>gb|KYP31883.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1016
Score = 348 bits (894), Expect = e-109
Identities = 176/305 (57%), Positives = 220/305 (72%), Gaps = 6/305 (1%)
Frame = -3
Query: 899 WYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSP---LIEDV 729
WYLDSGCSRHMT D + F +L K++G VT+GD++KG+I+G GN IGNS LIE+V
Sbjct: 551 WYLDSGCSRHMTGDPSKFSSLKLKNEG-YVTYGDNNKGRILGHGN--IGNSSSQTLIENV 607
Query: 728 ALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDNCI-FIGNRDNNVYTIDMLN--L 558
LVDGLKHNLLSISQL D+GFK+ F +CC + D+ I FIG R +N+Y +D+ +
Sbjct: 608 LLVDGLKHNLLSISQLSDRGFKIEFDNTCCLICDKKTKEIRFIGKRIDNIYMLDLEHSIA 667
Query: 557 SSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQ 378
S+ CL ++ WLWHRR H DHL+++ K+++ G+PKL+F KDK+CDACQ GKQ
Sbjct: 668 ISNTKCLITKEDNIWLWHRRAAHIHMDHLNKLSRKELVVGLPKLKFSKDKLCDACQKGKQ 727
Query: 377 HKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDE 198
K SFK+ I+TTRPL LIHMDLFGP++T SL GN Y V+VDD++R+TWV FL NK++
Sbjct: 728 VKASFKSKNQISTTRPLQLIHMDLFGPSRTMSLGGNYYGLVIVDDYSRYTWVMFLANKND 787
Query: 197 AFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQNGV 18
AF+ F F K V+ EKN I IRSD GGEF N F FCEEHGI H S PRTPQQNGV
Sbjct: 788 AFNAFRKFAKLVQNEKNSNITSIRSDHGGEFQNIMFQKFCEEHGINHNFSAPRTPQQNGV 847
Query: 17 VERKN 3
VERKN
Sbjct: 848 VERKN 852
>gb|KYP53827.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 676
Score = 338 bits (868), Expect = e-108
Identities = 171/303 (56%), Positives = 215/303 (70%), Gaps = 4/303 (1%)
Frame = -3
Query: 899 WYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSP-LIEDVAL 723
WYLDSGCSRHMT D + F +L K++G V +GD +KGKI+G GNV +S LIE++ L
Sbjct: 1 WYLDSGCSRHMTGDPSKFSSLKLKNEG-YVNYGDKNKGKILGHGNVGNPSSQTLIENILL 59
Query: 722 VDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDNCI-FIGNRDNNVYTIDMLN--LSS 552
VDGLKHNLLSISQL DKGFK+ F +CC + D+ I FIG R +N+Y +D+ + S
Sbjct: 60 VDGLKHNLLSISQLSDKGFKIEFDNTCCLICDKKTKEIRFIGKRIDNIYMLDLEHSIAIS 119
Query: 551 SISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQHK 372
+ CL E+ WLWHRR H DHL+++ K+++ G+PKL+F KDK+CDACQ GKQ K
Sbjct: 120 NTKCLITQEENIWLWHRRAAHIHMDHLNKLSRKELVIGLPKLKFGKDKLCDACQKGKQVK 179
Query: 371 VSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDEAF 192
SFK+ I+TTRPL LIHMDLFGP++T SL N Y V++DD++R+TWV FL NK++AF
Sbjct: 180 ASFKSKNQISTTRPLQLIHMDLFGPSRTMSLGRNYYGLVIIDDYSRYTWVMFLANKNDAF 239
Query: 191 SRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQNGVVE 12
+ F F K V+ EK I IRSD GGEF N F FC+EHGI H S PRTPQQNGVVE
Sbjct: 240 NAFRKFAKLVQNEKCSNITSIRSDHGGEFQNLMFQKFCQEHGINHNFSAPRTPQQNGVVE 299
Query: 11 RKN 3
RKN
Sbjct: 300 RKN 302
>gb|KYP77343.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 854
Score = 343 bits (880), Expect = e-108
Identities = 176/305 (57%), Positives = 218/305 (71%), Gaps = 6/305 (1%)
Frame = -3
Query: 899 WYLDSGCSRHMTWDVNNFRTLSRKSDGGTVTFGDDSKGKIIGFGNVKIGNSP---LIEDV 729
WYLDSGCSRHMT D + F +L K++G VT+GD++KGKI+G GN IGNS LIE+V
Sbjct: 379 WYLDSGCSRHMTRDPSKFSSLKLKNEG-FVTYGDNNKGKILGHGN--IGNSSSLTLIENV 435
Query: 728 ALVDGLKHNLLSISQLCDKGFKVIFYPSCCKVFDEVDNCI-FIGNRDNNVYTIDMLN--L 558
LV+GLKHNLLSISQL DKGFK+ F +CC + D++ I FIG R +N+Y +D+ +
Sbjct: 436 LLVEGLKHNLLSISQLSDKGFKIEFDNTCCLICDKLTKEIRFIGKRIDNIYMLDLEHSIT 495
Query: 557 SSSISCLSAINEDPWLWHRRLGHASFDHLSRIGSKDIIKGVPKLRFEKDKVCDACQFGKQ 378
S+ CL ++ WLWHRR H DHL+++ K+++ G+PKL+F KDK+CDACQ GKQ
Sbjct: 496 ISNTKCLITKEDNIWLWHRRAAHIHMDHLNKLSRKELVIGLPKLKFSKDKLCDACQKGKQ 555
Query: 377 HKVSFKTLKDINTTRPLDLIHMDLFGPTQTKSLNGNRYAFVLVDDFTRFTWVFFLKNKDE 198
K SFK+ I+T+RPL LIHMDLFGP++T SL GN Y V+VDD++RFTWV FL NK E
Sbjct: 556 VKASFKSKNQISTSRPLQLIHMDLFGPSRTMSLGGNYYGLVMVDDYSRFTWVMFLANKSE 615
Query: 197 AFSRFSVFCKRVEKEKNFPIIRIRSDRGGEFINHDFITFCEEHGIKHELSCPRTPQQNGV 18
AF+ F F K V+ EKN I IRSD GGEF N F F EEH I H S PRTPQQNGV
Sbjct: 616 AFNAFKKFAKLVQNEKNTNITSIRSDHGGEFQNVLFQKFYEEHDINHNFSAPRTPQQNGV 675
Query: 17 VERKN 3
VERKN
Sbjct: 676 VERKN 680