BLASTX nr result

ID: Ophiopogon27_contig00026132 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00026132
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY70623.1| hypothetical protein ACMD2_27059, partial [Ananas...    43   4e-07

>gb|OAY70623.1| hypothetical protein ACMD2_27059, partial [Ananas comosus]
          Length = 363

 Score = 43.1 bits (100), Expect(2) = 4e-07
 Identities = 17/50 (34%), Positives = 33/50 (66%)
 Frame = +1

Query: 25  VIFVSSVYDAPYLNIREDFWNEFKNLRQLANYRWVIDGDFNVTHFFTEKR 174
           + ++++VY  P  + +EDF +E + L+ +   +WVI GDFN T + +E++
Sbjct: 24  IFYLTNVYGPPTWDGKEDFCSELRALKGICTGKWVICGDFNFTRYQSERK 73



 Score = 38.5 bits (88), Expect(2) = 4e-07
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 204 SMTFTWTK-HMSLSRARLNRFIISKSWILSHPLTFAKCLPSDVFDHVP 344
           + +FTW+    S + A+L+RF++S  W LS P    K LP    DH P
Sbjct: 101 NQSFTWSNMQQSPTLAKLDRFLVSTEWDLSFPHRRVKALPRLTSDHTP 148


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