BLASTX nr result
ID: Ophiopogon27_contig00025393
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00025393
(503 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020245356.1| LOW QUALITY PROTEIN: mediator of RNA polymer... 79 4e-15
ref|XP_009415884.1| PREDICTED: mediator of RNA polymerase II tra... 75 9e-14
ref|XP_010905498.1| PREDICTED: mediator of RNA polymerase II tra... 72 7e-13
ref|XP_008807437.1| PREDICTED: mediator of RNA polymerase II tra... 71 3e-12
gb|PKA59703.1| Mediator of RNA polymerase II transcription subun... 70 9e-12
ref|NP_001170098.1| uncharacterized protein LOC100384016 [Zea ma... 67 1e-10
ref|XP_006653331.1| PREDICTED: mediator of RNA polymerase II tra... 65 1e-10
ref|XP_002447706.1| mediator of RNA polymerase II transcription ... 65 7e-10
gb|KVI06178.1| hypothetical protein Ccrd_015478 [Cynara carduncu... 65 8e-10
gb|OEL14041.1| hypothetical protein BAE44_0024941 [Dichanthelium... 64 1e-09
dbj|BAJ88360.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 2e-09
ref|XP_019154787.1| PREDICTED: mediator of RNA polymerase II tra... 64 2e-09
ref|XP_020688519.1| mediator of RNA polymerase II transcription ... 64 2e-09
ref|NP_001145600.1| uncharacterized protein LOC100279078 [Zea ma... 64 2e-09
gb|PAN37807.1| hypothetical protein PAHAL_G00885 [Panicum hallii] 64 2e-09
ref|XP_017250191.1| PREDICTED: mediator of RNA polymerase II tra... 63 4e-09
ref|XP_020147562.1| mediator of RNA polymerase II transcription ... 63 4e-09
ref|XP_015635914.1| PREDICTED: mediator of RNA polymerase II tra... 63 4e-09
ref|XP_023747191.1| mediator of RNA polymerase II transcription ... 63 4e-09
ref|XP_020112005.1| mediator of RNA polymerase II transcription ... 62 6e-09
>ref|XP_020245356.1| LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription
subunit 30 [Asparagus officinalis]
Length = 168
Score = 78.6 bits (192), Expect = 4e-15
Identities = 45/84 (53%), Positives = 50/84 (59%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQETDMEVEPDQAXXXXXXXXXXXXXXXLTSKNKH 201
LD+ARLRY+S VPNS QE MEVE DQA +KN H
Sbjct: 90 LDDARLRYRSAVAALRAVLAAVPNSTQEMAMEVEVDQAVRKYVFLMQEI-----ANKNNH 144
Query: 200 LKLLIDQLRDLVDDIAMWQSPCSV 129
LKLLIDQLRDL+ D+AMWQSPCSV
Sbjct: 145 LKLLIDQLRDLIADLAMWQSPCSV 168
>ref|XP_009415884.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 163
Score = 74.7 bits (182), Expect = 9e-14
Identities = 45/104 (43%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = -1
Query: 437 PLDASSXXXXXXXXXXXXALDEARLRYKSXXXXXXXXXXXVPNSPQETD-MEVEPDQAXX 261
P+D+SS LDEARLRYKS +P++ QE ++ D
Sbjct: 60 PVDSSSHPSEAGGGSGGGVLDEARLRYKSAVLALRSCIAAIPSATQEAGALDSRADAVEL 119
Query: 260 XXXXXXXXXXXXXLTSKNKHLKLLIDQLRDLVDDIAMWQSPCSV 129
L +KNKHLKLLIDQLRDL+ DIAMWQSPCSV
Sbjct: 120 ERLEERASSLRKELENKNKHLKLLIDQLRDLITDIAMWQSPCSV 163
>ref|XP_010905498.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
isoform X1 [Elaeis guineensis]
Length = 163
Score = 72.4 bits (176), Expect = 7e-13
Identities = 42/84 (50%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQETD-MEVEPDQAXXXXXXXXXXXXXXXLTSKNK 204
LDEARLRYKS VP+SPQET ++ + D A L +KNK
Sbjct: 79 LDEARLRYKSAIANLRAVIAAVPSSPQETGALDAKADPAEIERLEERVSALRKELENKNK 138
Query: 203 HLKLLIDQLRDLVDDIAMWQSPCS 132
HLK LIDQLR+L+ DI+MWQSPCS
Sbjct: 139 HLKHLIDQLRNLITDISMWQSPCS 162
>ref|XP_008807437.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
[Phoenix dactylifera]
Length = 164
Score = 70.9 bits (172), Expect = 3e-12
Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQETD-MEVEPDQAXXXXXXXXXXXXXXXLTSKNK 204
LDEARLRYKS +P+SPQET +E + D A L +KNK
Sbjct: 80 LDEARLRYKSAIANLRAVIAAIPSSPQETGALEAKADPAEIQRLEERVSDLRKELENKNK 139
Query: 203 HLKLLIDQLRDLVDDIAMWQSPCS 132
+LK LIDQLR L+ DI+MWQSPCS
Sbjct: 140 YLKHLIDQLRSLITDISMWQSPCS 163
>gb|PKA59703.1| Mediator of RNA polymerase II transcription subunit 30 [Apostasia
shenzhenica]
Length = 169
Score = 69.7 bits (169), Expect = 9e-12
Identities = 38/83 (45%), Positives = 48/83 (57%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQETDMEVEPDQAXXXXXXXXXXXXXXXLTSKNKH 201
LD+ARLRYKS +P S Q ++E + DQA L+ KNKH
Sbjct: 86 LDDARLRYKSAVASLRAVLAAIPCSSQNGELESKVDQAEVDKLEGRAAVLRKELSRKNKH 145
Query: 200 LKLLIDQLRDLVDDIAMWQSPCS 132
LKLLIDQ R+L+ D++MWQSPCS
Sbjct: 146 LKLLIDQFRNLIADMSMWQSPCS 168
>ref|NP_001170098.1| uncharacterized protein LOC100384016 [Zea mays]
gb|ACN35788.1| unknown [Zea mays]
gb|ONM18077.1| Mediator of RNA polymerase II transcription subunit 30 [Zea mays]
Length = 176
Score = 67.0 bits (162), Expect = 1e-10
Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQET-DMEVEPDQAXXXXXXXXXXXXXXXLTSKNK 204
LDEAR RYKS V + PQ+ E E DQA + SKNK
Sbjct: 92 LDEARHRYKSAVVALRDSISAVSSCPQDIGSTESEVDQAEIERLEEHASALRKEIESKNK 151
Query: 203 HLKLLIDQLRDLVDDIAMWQSPCSV 129
+KLL+DQLRDL+ D+AMWQSPCSV
Sbjct: 152 QVKLLMDQLRDLITDVAMWQSPCSV 176
>ref|XP_006653331.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like, partial [Oryza brachyantha]
Length = 99
Score = 64.7 bits (156), Expect = 1e-10
Identities = 40/85 (47%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQET-DMEVEPDQAXXXXXXXXXXXXXXXLTSKNK 204
LDEAR RYK V + QE E DQA + SKNK
Sbjct: 15 LDEARHRYKVAVSALRASIAAVSSCAQEMGSTEHSADQAEIERLEEHASSLRKEIESKNK 74
Query: 203 HLKLLIDQLRDLVDDIAMWQSPCSV 129
H+KLLIDQLRDL+ DI+MWQSPCSV
Sbjct: 75 HVKLLIDQLRDLISDISMWQSPCSV 99
>ref|XP_002447706.1| mediator of RNA polymerase II transcription subunit 30 isoform X3
[Sorghum bicolor]
gb|EES12034.1| hypothetical protein SORBI_3006G051900 [Sorghum bicolor]
Length = 172
Score = 64.7 bits (156), Expect = 7e-10
Identities = 38/85 (44%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQET-DMEVEPDQAXXXXXXXXXXXXXXXLTSKNK 204
LDEAR RYKS + + Q+T E E D A + SKNK
Sbjct: 88 LDEARHRYKSAVAALRASISALSSCAQDTGSTESEADHAEIERLEEHASALRKEIESKNK 147
Query: 203 HLKLLIDQLRDLVDDIAMWQSPCSV 129
+KLL+DQLRDL+ D+AMWQSPCSV
Sbjct: 148 QVKLLMDQLRDLITDVAMWQSPCSV 172
>gb|KVI06178.1| hypothetical protein Ccrd_015478 [Cynara cardunculus var. scolymus]
Length = 174
Score = 64.7 bits (156), Expect = 8e-10
Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = -1
Query: 431 DASSXXXXXXXXXXXXALDEARLRYKSXXXXXXXXXXXVPNSPQETDMEVEP---DQAXX 261
DA+S ALDEARLRYKS +PNS + +++P D+
Sbjct: 71 DATSSDTAHHFEMGGGALDEARLRYKSSVAALRSVLTAIPNSRKAKAYDIDPISTDELDA 130
Query: 260 XXXXXXXXXXXXXLTSKNKHLKLLIDQLRDLVDDIAMWQSPCSV 129
L +KNKHLKLLIDQLR+L+ D++ WQSP S+
Sbjct: 131 EKLEERASTLRKDLENKNKHLKLLIDQLRELITDVSTWQSPVSI 174
>gb|OEL14041.1| hypothetical protein BAE44_0024941 [Dichanthelium oligosanthes]
Length = 173
Score = 63.9 bits (154), Expect = 1e-09
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQET-DMEVEPDQAXXXXXXXXXXXXXXXLTSKNK 204
LDEAR RYKS V + Q+T E E D A + SKNK
Sbjct: 89 LDEARHRYKSAVAALRASIAAVSSCTQDTGSTESEADHAEIERLEERASALRKEIESKNK 148
Query: 203 HLKLLIDQLRDLVDDIAMWQSPCSV 129
H+KLL+DQLR+L+ DI++WQSPCSV
Sbjct: 149 HVKLLMDQLRELITDISIWQSPCSV 173
>dbj|BAJ88360.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 177
Score = 63.9 bits (154), Expect = 2e-09
Identities = 40/105 (38%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = -1
Query: 440 HPLDASSXXXXXXXXXXXXALDEARLRYK-SXXXXXXXXXXXVPNSPQETDMEVEPDQAX 264
H D+ + +LDEAR RYK + P++ + E + DQA
Sbjct: 73 HSADSDADAMGGAAGGSGGSLDEARHRYKIAVAALRASIAAVSPSTQEPGPTESKGDQAE 132
Query: 263 XXXXXXXXXXXXXXLTSKNKHLKLLIDQLRDLVDDIAMWQSPCSV 129
+ SKNK LKLLIDQLRDL+ DI+MWQSPCSV
Sbjct: 133 IERLEEHASSLRKEIGSKNKQLKLLIDQLRDLISDISMWQSPCSV 177
>ref|XP_019154787.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
[Ipomoea nil]
Length = 178
Score = 63.9 bits (154), Expect = 2e-09
Identities = 43/108 (39%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Frame = -1
Query: 431 DASSXXXXXXXXXXXXALDEARLRYKSXXXXXXXXXXXVPNSPQETDMEVEP-------D 273
D+SS ALDE+RLRYKS + NS + +EV D
Sbjct: 71 DSSSSSSTHHFDVGGGALDESRLRYKSSVAALRTVLTAISNSQKAKALEVASNGPTSPAD 130
Query: 272 QAXXXXXXXXXXXXXXXLTSKNKHLKLLIDQLRDLVDDIAMWQSPCSV 129
+A LT KNKHLK LIDQLRD++ DI+ WQSPCSV
Sbjct: 131 EAEIEQLEDQACNLRKELTEKNKHLKHLIDQLRDVIGDISTWQSPCSV 178
>ref|XP_020688519.1| mediator of RNA polymerase II transcription subunit 30 isoform X1
[Dendrobium catenatum]
gb|PKU82673.1| Mediator of RNA polymerase II transcription subunit 30 [Dendrobium
catenatum]
Length = 179
Score = 63.9 bits (154), Expect = 2e-09
Identities = 38/85 (44%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQETD-MEVEPDQAXXXXXXXXXXXXXXXLTSKNK 204
LDEARLRYK+ +P+S QE +E + DQ L KNK
Sbjct: 95 LDEARLRYKTAVASLRAVLAAIPSSSQENGALEAKVDQVEIERLEERCAVLRKELADKNK 154
Query: 203 HLKLLIDQLRDLVDDIAMWQSPCSV 129
HLKLLIDQ R+LV D++MW SP SV
Sbjct: 155 HLKLLIDQFRNLVADVSMWNSPFSV 179
>ref|NP_001145600.1| uncharacterized protein LOC100279078 [Zea mays]
gb|ACG48801.1| hypothetical protein [Zea mays]
gb|AQK43253.1| Mediator of RNA polymerase II transcription subunit 30 [Zea mays]
Length = 172
Score = 63.5 bits (153), Expect = 2e-09
Identities = 40/85 (47%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQET-DMEVEPDQAXXXXXXXXXXXXXXXLTSKNK 204
LDEAR RYKS V + Q+ E E D A + SKNK
Sbjct: 88 LDEARHRYKSAVAALRASISAVSSCAQDIGSTESEADHAEIERLEEHASALRKEIESKNK 147
Query: 203 HLKLLIDQLRDLVDDIAMWQSPCSV 129
+KLLIDQLRDL+ DIAMWQSPCSV
Sbjct: 148 QVKLLIDQLRDLIADIAMWQSPCSV 172
>gb|PAN37807.1| hypothetical protein PAHAL_G00885 [Panicum hallii]
Length = 176
Score = 63.5 bits (153), Expect = 2e-09
Identities = 39/85 (45%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQET-DMEVEPDQAXXXXXXXXXXXXXXXLTSKNK 204
LDEAR RYKS V + Q+ E E D A + SKNK
Sbjct: 92 LDEARHRYKSAVTALRTSIAAVSSCAQDIGSTESEADHAEIERLEERASALRKEIESKNK 151
Query: 203 HLKLLIDQLRDLVDDIAMWQSPCSV 129
H+KLL+DQLR+LV DI+MWQSPCSV
Sbjct: 152 HIKLLMDQLRELVADISMWQSPCSV 176
>ref|XP_017250191.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
[Daucus carota subsp. sativus]
gb|KZM93141.1| hypothetical protein DCAR_016386 [Daucus carota subsp. sativus]
Length = 190
Score = 63.2 bits (152), Expect = 4e-09
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQE------TDMEVEP-DQAXXXXXXXXXXXXXXX 222
LDEARLRYKS +PNS + TD + P D+
Sbjct: 100 LDEARLRYKSSVAALRNLLAAIPNSQAKAYEMDSTDGSISPMDEDDTEKLEERAATLRKE 159
Query: 221 LTSKNKHLKLLIDQLRDLVDDIAMWQSPCSV 129
L +KNK+LK+LIDQLR+L++D++ WQSPCSV
Sbjct: 160 LANKNKYLKVLIDQLRELINDVSTWQSPCSV 190
>ref|XP_020147562.1| mediator of RNA polymerase II transcription subunit 30 [Aegilops
tauschii subsp. tauschii]
Length = 175
Score = 62.8 bits (151), Expect = 4e-09
Identities = 42/105 (40%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = -1
Query: 440 HPLDASSXXXXXXXXXXXXALDEARLRYKSXXXXXXXXXXXVPNSPQETD-MEVEPDQAX 264
H D+ + +LDEAR RYK V S QE E + DQA
Sbjct: 71 HSADSDADAMGGAAGGSGGSLDEARHRYKIAVAALRASIAAVSPSTQEMGPTESKGDQAE 130
Query: 263 XXXXXXXXXXXXXXLTSKNKHLKLLIDQLRDLVDDIAMWQSPCSV 129
+ S+NK LKLLIDQLRDL+ DI+MWQSPCSV
Sbjct: 131 IERLEEHASSLRKEIESRNKQLKLLIDQLRDLISDISMWQSPCSV 175
>ref|XP_015635914.1| PREDICTED: mediator of RNA polymerase II transcription subunit 30
[Oryza sativa Japonica Group]
gb|EEC77174.1| hypothetical protein OsI_15660 [Oryza sativa Indica Group]
gb|EEE60894.1| hypothetical protein OsJ_14577 [Oryza sativa Japonica Group]
Length = 197
Score = 63.2 bits (152), Expect = 4e-09
Identities = 39/85 (45%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQET-DMEVEPDQAXXXXXXXXXXXXXXXLTSKNK 204
LDEAR RYK V + QE E + DQA + SKNK
Sbjct: 113 LDEARHRYKVAMAALRTSIAAVSSCAQEMGSTEHKADQAEIERLEEHASALRKEIESKNK 172
Query: 203 HLKLLIDQLRDLVDDIAMWQSPCSV 129
H+KLLIDQL DL+ DI+MWQSPCSV
Sbjct: 173 HVKLLIDQLHDLISDISMWQSPCSV 197
>ref|XP_023747191.1| mediator of RNA polymerase II transcription subunit 30 [Lactuca
sativa]
gb|PLY63624.1| hypothetical protein LSAT_4X81240 [Lactuca sativa]
Length = 179
Score = 62.8 bits (151), Expect = 4e-09
Identities = 40/104 (38%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -1
Query: 431 DASSXXXXXXXXXXXXALDEARLRYKSXXXXXXXXXXXVPNSPQETDMEVEP---DQAXX 261
DA+S ALDEARLRYK+ +PNS + +++P D+
Sbjct: 76 DATSSDAAHHFEMGGGALDEARLRYKASVAALRSVLIAIPNSKKAKAYDIDPMLTDEMDA 135
Query: 260 XXXXXXXXXXXXXLTSKNKHLKLLIDQLRDLVDDIAMWQSPCSV 129
L KNKHLK+LIDQLRDL+ DI+ WQSP V
Sbjct: 136 EKLEDRASALRKELEDKNKHLKILIDQLRDLITDISSWQSPIVV 179
>ref|XP_020112005.1| mediator of RNA polymerase II transcription subunit 30 [Ananas
comosus]
Length = 180
Score = 62.4 bits (150), Expect = 6e-09
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -1
Query: 380 LDEARLRYKSXXXXXXXXXXXVPNSPQETD-MEVEPDQAXXXXXXXXXXXXXXXLTSKNK 204
LD+AR RYKS + S QE +E + DQ + KN+
Sbjct: 96 LDDARHRYKSAVAALRASIAAISASTQEVSTLEPKADQVEIERLEERASALRKEIEIKNR 155
Query: 203 HLKLLIDQLRDLVDDIAMWQSPCSV 129
HLKLLIDQLR+L+ DI+MWQSPCSV
Sbjct: 156 HLKLLIDQLRNLIADISMWQSPCSV 180