BLASTX nr result

ID: Ophiopogon27_contig00025017 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00025017
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256425.1| putative F-box/FBD/LRR-repeat protein At4g03...   137   7e-35
ref|XP_010905009.1| PREDICTED: uncharacterized protein LOC105032...    62   2e-08
ref|XP_010905728.2| PREDICTED: putative F-box/LRR-repeat protein...    56   4e-06

>ref|XP_020256425.1| putative F-box/FBD/LRR-repeat protein At4g03220 [Asparagus
           officinalis]
 gb|ONK74624.1| uncharacterized protein A4U43_C03F8410 [Asparagus officinalis]
          Length = 516

 Score =  137 bits (345), Expect = 7e-35
 Identities = 72/114 (63%), Positives = 88/114 (77%)
 Frame = -3

Query: 519 FGLLKAFNQLESLCLSIVHPNKPQKIEVHHEEKQLRKLDRISINCLQSHLKELTIRGFEG 340
           FGL+KAF+ LESL L IVHP++    +VH EEKQLRKL   SI+CL+S LKEL + GFEG
Sbjct: 405 FGLVKAFDNLESLHLFIVHPSESD--DVHLEEKQLRKLKSTSISCLESRLKELKVEGFEG 462

Query: 339 NDIEIKLLKFLLDNGKVLEKVDIKTFTPSFLAHGEINGKLLNWRRSPDLKLHYS 178
            DIEIKL+KFL+D  KVL KVDI+T+TPSFL HGEI   LLN   S DL+++Y+
Sbjct: 463 TDIEIKLIKFLVDYCKVLAKVDIETYTPSFLTHGEIKANLLNQWSSKDLEVNYN 516


>ref|XP_010905009.1| PREDICTED: uncharacterized protein LOC105032297 [Elaeis guineensis]
          Length = 240

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 27/87 (31%), Positives = 51/87 (58%)
 Frame = -3

Query: 441 EVHHEEKQLRKLDRISINCLQSHLKELTIRGFEGNDIEIKLLKFLLDNGKVLEKVDIKTF 262
           ++  ++ +  +L ++S NCLQ HL+++ +  F+G   E+KL KFL+ +   LE++ I+  
Sbjct: 153 DMESDDAEFHELPKVSYNCLQHHLRKIKLVNFQGGADEMKLAKFLIGSAIALEEIHIQGI 212

Query: 261 TPSFLAHGEINGKLLNWRRSPDLKLHY 181
             +F  H  +  KLL W  +P  ++ Y
Sbjct: 213 EQTFCHHMRVKRKLLRWITNPHTEVTY 239


>ref|XP_010905728.2| PREDICTED: putative F-box/LRR-repeat protein At3g28410 [Elaeis
           guineensis]
          Length = 372

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/106 (34%), Positives = 54/106 (50%)
 Frame = -3

Query: 498 NQLESLCLSIVHPNKPQKIEVHHEEKQLRKLDRISINCLQSHLKELTIRGFEGNDIEIKL 319
           NQ E     I HPN    I+   E   L  L  I+  CLQ  LK + I  F+G+ ++  L
Sbjct: 267 NQWEHDDEEIGHPNLQNVIKDEEEFGHLN-LQNITTECLQYRLKRINIVHFKGHMVQRML 325

Query: 318 LKFLLDNGKVLEKVDIKTFTPSFLAHGEINGKLLNWRRSPDLKLHY 181
           +KFLL N   LEK+ +     S   H ++  +LL+WR +P  ++ Y
Sbjct: 326 VKFLLGNAMALEKMFVAGGMASISHHLKVMEELLSWRANPLTEILY 371


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