BLASTX nr result
ID: Ophiopogon27_contig00024938
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00024938
(356 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera] 59 1e-08
gb|ODS38622.1| hypothetical protein BEH94_12115 [Candidatus Alti... 56 1e-07
ref|WP_091224524.1| ribonuclease H [Paenibacillus sp. BC26] >gi|... 55 1e-06
ref|WP_090982637.1| ribonuclease H [Paenibacillus sp. CF384] >gi... 55 1e-06
ref|WP_073149137.1| ribonuclease H [Mesonia phycicola] >gi|11098... 54 4e-06
ref|WP_072730325.1| ribonuclease H [Paenibacillus sp. NAIST15-1] 54 5e-06
dbj|GAV13916.1| ribonuclease H [Paenibacillus sp. NAIST15-1] 54 6e-06
emb|CAN71683.1| hypothetical protein VITISV_040973 [Vitis vinifera] 54 6e-06
ref|WP_028533502.1| MULTISPECIES: ribonuclease H [Paenibacillus] 53 7e-06
ref|WP_020618607.1| hypothetical protein [Paenibacillus daejeone... 53 7e-06
gb|EPY14172.1| ribonuclease H-like protein [Paenibacillus alvei ... 53 9e-06
ref|WP_013305975.1| ribonuclease H [Maribacter sp. HTCC2170] >gi... 53 9e-06
ref|WP_044353267.1| ribonuclease H [Paenibacillus sp. E194] >gi|... 53 1e-05
>emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera]
Length = 118
Score = 58.5 bits (140), Expect = 1e-08
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFMKY 231
+YVVF GR+ G+Y++WPEC QV GYK V Y TF+E A+M Y
Sbjct: 31 YYVVFAGRKKGIYNSWPECQEQVVGYKGNVYKLYKTFEEARRAWMFY 77
>gb|ODS38622.1| hypothetical protein BEH94_12115 [Candidatus Altiarchaeales
archaeon WOR_SM1_SCG]
Length = 126
Score = 56.2 bits (134), Expect = 1e-07
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFMK----YWGFQFQMS 255
+YVV+VGR+ G++ W ECN QV G+ A+ + T +E E AF K YWG + Q+S
Sbjct: 5 WYVVWVGRKTGIFETWKECNNQVKGFSNAIFLSFKTREEAEYAFSKSPGEYWGKREQIS 63
>ref|WP_091224524.1| ribonuclease H [Paenibacillus sp. BC26]
emb|SFT21548.1| ribonuclease HI [Paenibacillus sp. BC26]
Length = 219
Score = 55.1 bits (131), Expect = 1e-06
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFM----KYWG 237
FYVV+VGR+ GVYSNW EC AQ SG+ A Y T +EA+ K+WG
Sbjct: 6 FYVVWVGRKPGVYSNWSECQAQTSGFDDAKFKSYETRAAADEAYQGGWKKHWG 58
>ref|WP_090982637.1| ribonuclease H [Paenibacillus sp. CF384]
emb|SDX33509.1| ribonuclease HI [Paenibacillus sp. CF384]
Length = 219
Score = 55.1 bits (131), Expect = 1e-06
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFM----KYWG 237
FYVV+VGR+ GVYSNW EC AQ SG+ A Y T +EA+ K+WG
Sbjct: 6 FYVVWVGRKPGVYSNWSECQAQTSGFDDAKFKSYETKAAADEAYQGGWKKHWG 58
>ref|WP_073149137.1| ribonuclease H [Mesonia phycicola]
emb|SHI65566.1| ribonuclease HI [Mesonia phycicola]
Length = 211
Score = 53.9 bits (128), Expect = 4e-06
Identities = 23/53 (43%), Positives = 38/53 (71%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFMKYWGFQFQ 249
FYVV+ G++ G++S+W EC A ++GYK A + TF+E ++AF K + F+F+
Sbjct: 7 FYVVWQGKQAGIFSSWAECKASITGYKGAQYKSFKTFEEAKQAFNKSY-FEFK 58
>ref|WP_072730325.1| ribonuclease H [Paenibacillus sp. NAIST15-1]
Length = 215
Score = 53.5 bits (127), Expect = 5e-06
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFMKYW 234
+YVV+ G + GVY++WPEC AQVS YK A Y + E E+A+ + W
Sbjct: 6 YYVVWEGNKPGVYTSWPECQAQVSNYKDAKYKSYTSQSEAEKAYREGW 53
>dbj|GAV13916.1| ribonuclease H [Paenibacillus sp. NAIST15-1]
Length = 241
Score = 53.5 bits (127), Expect = 6e-06
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFMKYW 234
+YVV+ G + GVY++WPEC AQVS YK A Y + E E+A+ + W
Sbjct: 32 YYVVWEGNKPGVYTSWPECQAQVSNYKDAKYKSYTSQSEAEKAYREGW 79
>emb|CAN71683.1| hypothetical protein VITISV_040973 [Vitis vinifera]
Length = 375
Score = 53.9 bits (128), Expect = 6e-06
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFMKY 231
+YVVF R+ G+Y++WPEC QV GYK V Y TF+E A++ Y
Sbjct: 267 YYVVFAVRKSGIYNSWPECQEQVVGYKGNVYKSYKTFEEARRAWVFY 313
>ref|WP_028533502.1| MULTISPECIES: ribonuclease H [Paenibacillus]
Length = 215
Score = 53.1 bits (126), Expect = 7e-06
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFMKYW 234
+YVV+ G + GVY++WPEC AQVS YK A Y + E E+A+ + W
Sbjct: 6 YYVVWEGSKPGVYTSWPECQAQVSNYKDAKYKSYTSQSEAEKAYREGW 53
>ref|WP_020618607.1| hypothetical protein [Paenibacillus daejeonensis]
Length = 215
Score = 53.1 bits (126), Expect = 7e-06
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +1
Query: 85 GFFYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFMKYW 234
G +YVV+ G++ G+Y+NWP+C QV+GY A + T E E+A+ K W
Sbjct: 4 GKYYVVWQGKQPGIYTNWPDCQKQVNGYTDAKYKSFATKAEAEQAYQKGW 53
>gb|EPY14172.1| ribonuclease H-like protein [Paenibacillus alvei A6-6i-x]
emb|SDF26801.1| ribonuclease HI [Paenibacillus sp. cl6col]
Length = 241
Score = 53.1 bits (126), Expect = 9e-06
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFMKYW 234
+YVV+ G + GVY++WPEC AQVS YK A Y + E E+A+ + W
Sbjct: 32 YYVVWEGSKPGVYTSWPECQAQVSNYKDAKYKSYTSQSEAEKAYREGW 79
>ref|WP_013305975.1| ribonuclease H [Maribacter sp. HTCC2170]
gb|EAR02927.1| ribonuclease H-related protein [Maribacter sp. HTCC2170]
Length = 211
Score = 52.8 bits (125), Expect = 9e-06
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAF 222
FYVV+ G+R GVYS W +C A ++GYK A ++TFDE ++A+
Sbjct: 7 FYVVWKGKRPGVYSTWEDCKAAITGYKGAQYKSFSTFDEAKKAY 50
>ref|WP_044353267.1| ribonuclease H [Paenibacillus sp. E194]
gb|KJB89552.1| ribonuclease H [Paenibacillus sp. E194]
Length = 215
Score = 52.8 bits (125), Expect = 1e-05
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +1
Query: 91 FYVVFVGRRLGVYSNWPECNAQVSGYKKAVC*RYNTFDEVEEAFMKYW 234
+YVV+ G + G+Y++WPEC AQVS YK A Y + E E+A+ + W
Sbjct: 6 YYVVWEGSKPGIYTSWPECQAQVSNYKDAKYKSYTSKSEAEKAYREGW 53