BLASTX nr result

ID: Ophiopogon27_contig00024818 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00024818
         (441 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]    61   6e-08
ref|XP_019081780.1| PREDICTED: F-box protein At2g26160-like [Vit...    56   3e-06

>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score = 60.8 bits (146), Expect = 6e-08
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
 Frame = +1

Query: 94  SDWVDSENFKSTVSIASI--------GWSHLPPELVEKIAGNLDEIADRVRLGAVCKPWQ 249
           SD++  +NF ST S + +        GW+ LP +L+E I  NL  I D +R GAVC PW 
Sbjct: 106 SDFLAQKNFDSTSSSSLLDWQRMEYSGWAWLPDDLLEPILNNLASIVDSIRFGAVCTPWH 165

Query: 250 SASKSIXXXXXXXXXXXXGDPDDSW----RRLNRNEVQSFFSISDKRIYKLLLPC--GTQ 411
           S +                 P   W     + N  + +SF+SI+ +++ K  LP   GT+
Sbjct: 166 SLAVKSFQRLPVNQRPHLQPPPLPWLMVLSKPNSKDSRSFYSITHQKLSKFHLPVPPGTR 225

Query: 412 EKTYHGSPYG 441
              Y GS +G
Sbjct: 226 ---YCGSSHG 232


>ref|XP_019081780.1| PREDICTED: F-box protein At2g26160-like [Vitis vinifera]
          Length = 401

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
 Frame = +1

Query: 148 GWSHLPPELVEKIAGNLDEIADRVRLGAVCKPWQSASKSIXXXXXXXXXXXXGDPDDSW- 324
           GW+ LP +L+E I  NL  I D +R GAVC PW S +                 P   W 
Sbjct: 5   GWAWLPDDLLEPILNNLASIVDSIRFGAVCTPWHSLAVKSFQRLPVNQRPHLQPPPLPWL 64

Query: 325 ---RRLNRNEVQSFFSISDKRIYKLLLPC--GTQEKTYHGSPYG 441
               + N  + +SF+SI+ +++ K  LP   GT+   Y GS +G
Sbjct: 65  MVLSKPNSKDSRSFYSITHQKLSKFHLPVPPGTR---YCGSSHG 105


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