BLASTX nr result

ID: Ophiopogon27_contig00024488 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00024488
         (832 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK62815.1| uncharacterized protein A4U43_C07F8420 [Asparagus...    77   3e-12
ref|XP_020275710.1| nuclear pore complex protein NUP214 [Asparag...    77   3e-12

>gb|ONK62815.1| uncharacterized protein A4U43_C07F8420 [Asparagus officinalis]
          Length = 1725

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 42/76 (55%), Positives = 53/76 (69%)
 Frame = +3

Query: 3    TQSASREVETVSENENKLLPTNSTSSPLPVSLSQPGIXXXXXXXXXXXEKGEWLDVSLSQ 182
            ++S S EVE V + +N LL TNS+S+PLP SLSQP I           EK + +DVSLSQ
Sbjct: 1396 SKSPSEEVEPVPKTQNNLLLTNSSSTPLPASLSQPQIQPSTTPLTTTTEKDQQVDVSLSQ 1455

Query: 183  EYEMDEEAPDTTTLSL 230
            E EM+EEAP+T+TLSL
Sbjct: 1456 EDEMEEEAPNTSTLSL 1471



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 44/116 (37%), Positives = 59/116 (50%)
 Frame = +3

Query: 453  LPSPSFISTQSQNLLNQINTSTTANSLPVKPFGVSSFDTKSGVSNQMASVSIXXXXXXXX 632
            L S S IS++SQN + Q      AN+LP KPFG S  D+K G  NQ+AS+S         
Sbjct: 1284 LLSSSLISSESQNSMVQ------ANALPAKPFGASFSDSKFGGPNQVASISTSTPGPSSH 1337

Query: 633  XXXXXXXXXXXXXXXXXTNSALLSTMSLSPAIADQPPLVTSATMDSLNLDKVSSKS 800
                             T  A LST + SP I++    VTSAT+ S++LD ++S S
Sbjct: 1338 SLPSSSTMFSQTQKSSSTTFASLSTAATSPGISEPTTPVTSATVSSIHLDNITSNS 1393


>ref|XP_020275710.1| nuclear pore complex protein NUP214 [Asparagus officinalis]
          Length = 1743

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 42/76 (55%), Positives = 53/76 (69%)
 Frame = +3

Query: 3    TQSASREVETVSENENKLLPTNSTSSPLPVSLSQPGIXXXXXXXXXXXEKGEWLDVSLSQ 182
            ++S S EVE V + +N LL TNS+S+PLP SLSQP I           EK + +DVSLSQ
Sbjct: 1434 SKSPSEEVEPVPKTQNNLLLTNSSSTPLPASLSQPQIQPSTTPLTTTTEKDQQVDVSLSQ 1493

Query: 183  EYEMDEEAPDTTTLSL 230
            E EM+EEAP+T+TLSL
Sbjct: 1494 EDEMEEEAPNTSTLSL 1509



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 44/116 (37%), Positives = 59/116 (50%)
 Frame = +3

Query: 453  LPSPSFISTQSQNLLNQINTSTTANSLPVKPFGVSSFDTKSGVSNQMASVSIXXXXXXXX 632
            L S S IS++SQN + Q      AN+LP KPFG S  D+K G  NQ+AS+S         
Sbjct: 1322 LLSSSLISSESQNSMVQ------ANALPAKPFGASFSDSKFGGPNQVASISTSTPGPSSH 1375

Query: 633  XXXXXXXXXXXXXXXXXTNSALLSTMSLSPAIADQPPLVTSATMDSLNLDKVSSKS 800
                             T  A LST + SP I++    VTSAT+ S++LD ++S S
Sbjct: 1376 SLPSSSTMFSQTQKSSSTTFASLSTAATSPGISEPTTPVTSATVSSIHLDNITSNS 1431


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