BLASTX nr result

ID: Ophiopogon27_contig00024327 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00024327
         (474 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010914250.1| PREDICTED: RING-H2 finger protein ATL74-like...    62   7e-09
ref|XP_009402536.1| PREDICTED: RING-H2 finger protein ATL73-like...    60   4e-08
ref|XP_008809337.1| PREDICTED: RING-H2 finger protein ATL74-like...    60   8e-08
ref|XP_024160740.1| RING-H2 finger protein ATL74-like [Rosa chin...    57   7e-07
gb|OVA03209.1| zinc finger protein [Macleaya cordata]                  55   3e-06
ref|XP_010260681.1| PREDICTED: RING-H2 finger protein ATL74-like...    55   4e-06
ref|XP_021306004.1| RING-H2 finger protein ATL74 [Sorghum bicolo...    54   7e-06

>ref|XP_010914250.1| PREDICTED: RING-H2 finger protein ATL74-like [Elaeis guineensis]
          Length = 181

 Score = 62.0 bits (149), Expect = 7e-09
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +2

Query: 2   FHVGCIDTWLMSHCSCPTCRNRLSAASQGSEVPLEI 109
           FHVGCIDTWL+SHCSCPTCR+RLS+ S   + PLEI
Sbjct: 143 FHVGCIDTWLLSHCSCPTCRHRLSSHST-DDPPLEI 177


>ref|XP_009402536.1| PREDICTED: RING-H2 finger protein ATL73-like [Musa acuminata subsp.
           malaccensis]
          Length = 167

 Score = 59.7 bits (143), Expect = 4e-08
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = +2

Query: 2   FHVGCIDTWLMSHCSCPTCRNRLSAASQGSEVPLEI 109
           FHV C+DTWL+SHCSCPTCR RLS    G+E PLE+
Sbjct: 130 FHVVCVDTWLLSHCSCPTCRRRLS--PHGAEAPLEM 163


>ref|XP_008809337.1| PREDICTED: RING-H2 finger protein ATL74-like [Phoenix dactylifera]
          Length = 212

 Score = 59.7 bits (143), Expect = 8e-08
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +2

Query: 2   FHVGCIDTWLMSHCSCPTCRNRLSAASQGSEVPLEI 109
           FHVGCIDTWL+S CSCPTCR+RLS  S  ++ PLEI
Sbjct: 175 FHVGCIDTWLLSRCSCPTCRHRLS--SHSTDPPLEI 208


>ref|XP_024160740.1| RING-H2 finger protein ATL74-like [Rosa chinensis]
 gb|PRQ30083.1| putative transcription factor C2H2 family [Rosa chinensis]
          Length = 182

 Score = 56.6 bits (135), Expect = 7e-07
 Identities = 25/39 (64%), Positives = 27/39 (69%)
 Frame = +2

Query: 2   FHVGCIDTWLMSHCSCPTCRNRLSAASQGSEVPLEIVTT 118
           FHV CID WL SH SCPTCR RL ++S     P EIVTT
Sbjct: 144 FHVVCIDKWLQSHSSCPTCRQRLKSSSDSMLSPSEIVTT 182


>gb|OVA03209.1| zinc finger protein [Macleaya cordata]
          Length = 198

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +2

Query: 2   FHVGCIDTWLMSHCSCPTCRNRLSAASQGSEVPLEIVT 115
           FH+GCIDTWL+SH SCPTCR+ L+        PLEIV+
Sbjct: 159 FHIGCIDTWLLSHSSCPTCRHLLNCHDLPPMNPLEIVS 196


>ref|XP_010260681.1| PREDICTED: RING-H2 finger protein ATL74-like [Nelumbo nucifera]
          Length = 184

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = +2

Query: 2   FHVGCIDTWLMSHCSCPTCRNRLSAASQGSEVPLEIVTTS 121
           FHV CIDTWL+SH SCPTCR+ L      +   L+IVT++
Sbjct: 144 FHVACIDTWLLSHSSCPTCRHHLKCNDSTTTAALQIVTSA 183


>ref|XP_021306004.1| RING-H2 finger protein ATL74 [Sorghum bicolor]
 gb|OQU76841.1| hypothetical protein SORBI_3010G221100 [Sorghum bicolor]
          Length = 179

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 24/39 (61%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
 Frame = +2

Query: 2   FHVGCIDTWLMSHCSCPTCRNRLSAASQ-GSEVPLEIVT 115
           FHV CID WL+SHCSCPTCR RLS+ S  G    L+++T
Sbjct: 139 FHVVCIDRWLVSHCSCPTCRRRLSSDSAVGGHDRLQVLT 177


Top