BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00024231
         (418 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020673278.1| pentatricopeptide repeat-containing protein ...    55   4e-06
gb|PKA46700.1| Pentatricopeptide repeat-containing protein [Apos...    55   4e-06
gb|PKU61116.1| Pentatricopeptide repeat-containing protein [Dend...    55   5e-06
ref|XP_020691698.1| pentatricopeptide repeat-containing protein ...    54   1e-05

>ref|XP_020673278.1| pentatricopeptide repeat-containing protein At5g06540-like
           [Dendrobium catenatum]
          Length = 276

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = -1

Query: 277 RFKLSFKLHVRARVMFDGIEEYVDAPLQVMLNARLTCGYLDDVRKMFNDSPHGGVVWWNE 98
           R   SF+L   A+++FD I    DA   +ML A L CG LDD R++F+D P  GV+ W+ 
Sbjct: 163 RIYASFRLIESAKLVFDSISNSNDASRNIMLGAYLKCGLLDDARQVFDDMPGKGVISWSV 222

Query: 97  VV 92
           ++
Sbjct: 223 MI 224


>gb|PKA46700.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 627

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 24/62 (38%), Positives = 39/62 (62%)
 Frame = -1

Query: 277 RFKLSFKLHVRARVMFDGIEEYVDAPLQVMLNARLTCGYLDDVRKMFNDSPHGGVVWWNE 98
           R   SF+L   AR++FDGI ++ +A   +M+   L CG  DD R+MF++ P  GV+ W+ 
Sbjct: 166 RMYSSFRLIEPARLVFDGISDFDEASKNIMIGGFLKCGLFDDARQMFDEMPQKGVISWSV 225

Query: 97  VV 92
           ++
Sbjct: 226 MI 227


>gb|PKU61116.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 342

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = -1

Query: 277 RFKLSFKLHVRARVMFDGIEEYVDAPLQVMLNARLTCGYLDDVRKMFNDSPHGGVVWWNE 98
           R   SF+L   A+++FD I    DA   +ML A L CG LDD R++F+D P  GV+ W+ 
Sbjct: 163 RIYASFRLIESAKLVFDSISNSNDASRNIMLGAYLKCGLLDDARQVFDDMPGKGVISWSV 222

Query: 97  VV 92
           ++
Sbjct: 223 MI 224


>ref|XP_020691698.1| pentatricopeptide repeat-containing protein At5g06540-like
           [Dendrobium catenatum]
 gb|PKU87528.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 624

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = -1

Query: 277 RFKLSFKLHVRARVMFDGIEEYVDAPLQVMLNARLTCGYLDDVRKMFNDSPHGGVVWWNE 98
           R   SF+L   A+++FD I  + DA   +ML A L C  LDD R++F+D P  GV+ W+ 
Sbjct: 163 RIYASFRLIESAKLVFDSISNFNDASRNIMLGAYLKCDLLDDARQLFDDMPVKGVISWSV 222

Query: 97  VV 92
           ++
Sbjct: 223 MI 224