BLASTX nr result

ID: Ophiopogon27_contig00024136 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00024136
         (524 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIA60143.1| hypothetical protein AQUCO_00400796v1 [Aquilegia ...    60   3e-08
ref|XP_012830636.1| PREDICTED: sigma factor binding protein 1, c...    57   5e-07
ref|XP_021610978.1| sigma factor binding protein 1, chloroplasti...    55   3e-06
ref|XP_006465756.1| PREDICTED: sigma factor binding protein 1, c...    54   7e-06
ref|XP_006576783.1| PREDICTED: sigma factor binding protein 1, c...    54   8e-06
gb|OVA05657.1| VQ [Macleaya cordata]                                   54   1e-05

>gb|PIA60143.1| hypothetical protein AQUCO_00400796v1 [Aquilegia coerulea]
          Length = 157

 Score = 60.5 bits (145), Expect = 3e-08
 Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
 Frame = +3

Query: 147 VVYISSPMKFETSTSKFRSLVQQLTGQYSDIADKADKQYSTINDSSSE-VRTIDPDDG 317
           VVYIS+PMK +TS S FR+LVQ+LTGQ SDIAD A + YS+ ND   E +RT+  ++G
Sbjct: 26  VVYISNPMKVKTSASDFRALVQELTGQDSDIADAASR-YSSENDRVDEGLRTVPNNEG 82


>ref|XP_012830636.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Erythranthe guttata]
 gb|EYU42924.1| hypothetical protein MIMGU_mgv1a015864mg [Erythranthe guttata]
          Length = 142

 Score = 56.6 bits (135), Expect = 5e-07
 Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 15/85 (17%)
 Frame = +3

Query: 147 VVYISSPMKFETSTSKFRSLVQQLTGQYSDIA---------------DKADKQYSTINDS 281
           VVYISSPMK +TS SKFRSLVQQLTG+ SDI+               D  +   S  ND+
Sbjct: 21  VVYISSPMKVKTSASKFRSLVQQLTGKNSDISQYMEESNNINNEVFRDFCEIDRSLANDN 80

Query: 282 SSEVRTIDPDDGGAERYKSIACPFK 356
                +I P D      +S+  PF+
Sbjct: 81  DRMFSSISPSDETTTSSESLLGPFE 105


>ref|XP_021610978.1| sigma factor binding protein 1, chloroplastic-like [Manihot
           esculenta]
 gb|OAY53366.1| hypothetical protein MANES_04G157400 [Manihot esculenta]
          Length = 142

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
 Frame = +3

Query: 72  LMEGLSVSXXXXXXXXXXXXXXXXXVVYISSPMKFETSTSKFRSLVQQLTGQYSDIADKA 251
           +M+ LSV+                 VVYISSPMKFETS SKFR+LVQ+LTG+ SD A++ 
Sbjct: 2   VMDVLSVNVKSKKQPRRRSTKKGIKVVYISSPMKFETSASKFRALVQELTGKDSD-AERL 60

Query: 252 DKQYSTINDSSSEV--RTIDPDDGGA 323
               + + + S+E+  R    + GG+
Sbjct: 61  MDDVNGVENYSTEILDRRAADESGGS 86


>ref|XP_006465756.1| PREDICTED: sigma factor binding protein 1, chloroplastic [Citrus
           sinensis]
 gb|KDO58850.1| hypothetical protein CISIN_1g041172mg [Citrus sinensis]
          Length = 141

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = +3

Query: 147 VVYISSPMKFETSTSKFRSLVQQLTGQYSDIADKADKQYSTINDSSSE 290
           VVYISSP+KFET  SKFR+LVQ+LTG+ SD AD A  ++S  N +  +
Sbjct: 27  VVYISSPVKFETCASKFRALVQELTGKDSD-ADAAAHRFSDTNSADDQ 73


>ref|XP_006576783.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Glycine max]
 gb|KHN30364.1| hypothetical protein glysoja_025855 [Glycine soja]
 gb|KRH66773.1| hypothetical protein GLYMA_03G127800 [Glycine max]
          Length = 167

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = +3

Query: 147 VVYISSPMKFETSTSKFRSLVQQLTGQYSDIADKADKQYSTIN-DSSSEVRTIDPDDGGA 323
           VVYIS+PMK +TS S+FR+LVQ+LTGQ ++      + +  I+ DSSS V  I+ ++   
Sbjct: 34  VVYISNPMKIKTSASEFRALVQELTGQDAESPPDPTRFHGLIHPDSSSSVDHIEEEEDNV 93

Query: 324 ERYKSIACPFKMLENMNV 377
                +  P    ENM++
Sbjct: 94  HSVNCVVPPAVADENMSL 111


>gb|OVA05657.1| VQ [Macleaya cordata]
          Length = 156

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 27/56 (48%), Positives = 39/56 (69%)
 Frame = +3

Query: 147 VVYISSPMKFETSTSKFRSLVQQLTGQYSDIADKADKQYSTINDSSSEVRTIDPDD 314
           VVYIS+PMK +TS S+FRSLVQ+LTG+ SD++D+   ++S   D     + +  DD
Sbjct: 28  VVYISNPMKVKTSVSEFRSLVQELTGRDSDLSDRT--RFSDTTDEIDGFQAVPDDD 81


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