BLASTX nr result

ID: Ophiopogon27_contig00023952 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00023952
         (552 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020255641.1| collagen alpha-2(IV) chain-like [Asparagus o...    62   5e-09
ref|XP_009386889.1| PREDICTED: UBP1-associated protein 2B-like [...    59   1e-06
ref|XP_019710741.1| PREDICTED: UBP1-associated protein 2B-like [...    58   1e-06
ref|XP_008779432.1| PREDICTED: UBP1-associated protein 2B-like [...    56   6e-06

>ref|XP_020255641.1| collagen alpha-2(IV) chain-like [Asparagus officinalis]
          Length = 130

 Score = 62.0 bits (149), Expect = 5e-09
 Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
 Frame = -3

Query: 550 PGFQGPAGYQNAQQVGALQSG---VAGSYQGGAVGQAQSIARPQAGQMGGYG 404
           PGFQGP G+QNA Q+GA Q+G    AGSYQGGA      + RP  GQMGGYG
Sbjct: 83  PGFQGPPGFQNATQMGAQQAGAGAAAGSYQGGA------MVRPPVGQMGGYG 128


>ref|XP_009386889.1| PREDICTED: UBP1-associated protein 2B-like [Musa acuminata subsp.
           malaccensis]
 ref|XP_018677170.1| PREDICTED: UBP1-associated protein 2B-like [Musa acuminata subsp.
           malaccensis]
          Length = 479

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 29/51 (56%), Positives = 31/51 (60%)
 Frame = -3

Query: 550 PGFQGPAGYQNAQQVGALQSGVAGSYQGGAVGQAQSIARPQAGQMGGYGPL 398
           PG QGP G+Q AQ V     G A SYQG   GQ   I+RP  G MGGYGPL
Sbjct: 430 PGLQGPPGFQGAQSVAQQGGGGASSYQGAPTGQG-PISRPPTGPMGGYGPL 479


>ref|XP_019710741.1| PREDICTED: UBP1-associated protein 2B-like [Elaeis guineensis]
          Length = 492

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/52 (61%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
 Frame = -3

Query: 550 PGFQGPAGYQNAQQVGALQ--SGVAGSYQGGAVGQAQSIARPQAGQMGGYGP 401
           PGFQGP GYQ   Q+G+ Q   G  GSYQGG VGQ   I RP  GQMGGY P
Sbjct: 442 PGFQGPPGYQGT-QLGSQQGVGGGGGSYQGGPVGQG-PIPRPPVGQMGGYAP 491


>ref|XP_008779432.1| PREDICTED: UBP1-associated protein 2B-like [Phoenix dactylifera]
          Length = 492

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 29/51 (56%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = -3

Query: 550 PGFQGPAGYQNAQQVG-ALQSGVAGSYQGGAVGQAQSIARPQAGQMGGYGP 401
           PGFQGP G+Q  Q V      G  GSYQGG VGQ   + RP  GQMGGY P
Sbjct: 442 PGFQGPPGFQGTQHVSQQAVGGGGGSYQGGPVGQV-PMPRPPVGQMGGYAP 491


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