BLASTX nr result

ID: Ophiopogon27_contig00023874 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00023874
         (510 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK69716.1| uncharacterized protein A4U43_C05F25980 [Asparagu...   118   1e-27
ref|XP_020264811.1| protein CROWDED NUCLEI 2-like isoform X1 [As...   118   1e-27

>gb|ONK69716.1| uncharacterized protein A4U43_C05F25980 [Asparagus officinalis]
          Length = 687

 Score =  118 bits (295), Expect = 1e-27
 Identities = 72/164 (43%), Positives = 92/164 (56%), Gaps = 1/164 (0%)
 Frame = -3

Query: 508 EHMDGSQSTHLSGPMPFLQNCSGLMNSSPREIVAHPIHGKSSRPTSLDVEPPEAKTDYGP 329
           E  DG +S HLSG    L+ CS   +SSPRE V   I G SS P S   E  ++K  Y  
Sbjct: 425 ERKDGPRSVHLSGHFSSLRKCSMQFSSSPRETVGCRIEGMSSEPISFGEETSKSKPKY-- 482

Query: 328 DKTDSEIGVRDSRVSERLHIDGDEPEAHLGIGDTIARKRDGKSNIFSNDVQDEGDEAEFQ 149
           DK  SEIG RDS++SERL    DEPE  L    T  RKR+G+ N+  ND+ D+ DE++ Q
Sbjct: 483 DKASSEIGSRDSKISERL--SKDEPETSLETEGTYIRKREGELNVSFNDLPDKEDESKHQ 540

Query: 148 SLSAMHRGGHQN-XXXXXXXXXXXXXXXAVEDANTVIGKSSEEK 20
           +LSA  RGGHQN                 VED+  ++ ++SEEK
Sbjct: 541 NLSAKQRGGHQNSRDQSDTIKDINSVQSVVEDSKVILEETSEEK 584


>ref|XP_020264811.1| protein CROWDED NUCLEI 2-like isoform X1 [Asparagus officinalis]
 ref|XP_020264812.1| protein CROWDED NUCLEI 2-like isoform X2 [Asparagus officinalis]
          Length = 850

 Score =  118 bits (295), Expect = 1e-27
 Identities = 72/164 (43%), Positives = 92/164 (56%), Gaps = 1/164 (0%)
 Frame = -3

Query: 508  EHMDGSQSTHLSGPMPFLQNCSGLMNSSPREIVAHPIHGKSSRPTSLDVEPPEAKTDYGP 329
            E  DG +S HLSG    L+ CS   +SSPRE V   I G SS P S   E  ++K  Y  
Sbjct: 588  ERKDGPRSVHLSGHFSSLRKCSMQFSSSPRETVGCRIEGMSSEPISFGEETSKSKPKY-- 645

Query: 328  DKTDSEIGVRDSRVSERLHIDGDEPEAHLGIGDTIARKRDGKSNIFSNDVQDEGDEAEFQ 149
            DK  SEIG RDS++SERL    DEPE  L    T  RKR+G+ N+  ND+ D+ DE++ Q
Sbjct: 646  DKASSEIGSRDSKISERL--SKDEPETSLETEGTYIRKREGELNVSFNDLPDKEDESKHQ 703

Query: 148  SLSAMHRGGHQN-XXXXXXXXXXXXXXXAVEDANTVIGKSSEEK 20
            +LSA  RGGHQN                 VED+  ++ ++SEEK
Sbjct: 704  NLSAKQRGGHQNSRDQSDTIKDINSVQSVVEDSKVILEETSEEK 747


Top